Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 MT-TR-201ENST00000387439 65 ntBASIC4.11□□□□□ -1.75
SMARCC1Q92922 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SMARCC1Q92922 RNA5SP229-201ENST00000410809 99 ntBASIC4.11□□□□□ -1.75
SMARCC1Q92922 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.11□□□□□ -1.75
SMARCC1Q92922 AL139281.1-201ENST00000422120 335 ntBASIC4.11□□□□□ -1.75
SMARCC1Q92922 ELOCP20-201ENST00000422460 345 ntBASIC4.11□□□□□ -1.75
SMARCC1Q92922 AC002075.2-201ENST00000425207 252 ntBASIC4.11□□□□□ -1.75
SMARCC1Q92922 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.11□□□□□ -1.75
SMARCC1Q92922 AC073910.1-201ENST00000445047 438 ntBASIC4.11□□□□□ -1.75
SMARCC1Q92922 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SMARCC1Q92922 AC079354.2-201ENST00000453523 154 ntBASIC4.11□□□□□ -1.75
SMARCC1Q92922 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC4.11□□□□□ -1.75
SMARCC1Q92922 RPS4XP2-201ENST00000458402 793 ntBASIC4.11□□□□□ -1.75
SMARCC1Q92922 RNU7-87P-201ENST00000459343 62 ntBASIC4.11□□□□□ -1.75
SMARCC1Q92922 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.11□□□□□ -1.75
SMARCC1Q92922 SNORA25.11-201ENST00000515935 105 ntBASIC4.11□□□□□ -1.75
SMARCC1Q92922 RNU6-388P-201ENST00000517012 105 ntBASIC4.11□□□□□ -1.75
SMARCC1Q92922 SNORA31.18-201ENST00000517043 134 ntBASIC4.11□□□□□ -1.75
SMARCC1Q92922 RNU6-389P-201ENST00000517048 105 ntBASIC4.11□□□□□ -1.75
SMARCC1Q92922 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.11□□□□□ -1.75
SMARCC1Q92922 CYCSP39-201ENST00000565821 309 ntBASIC4.11□□□□□ -1.75
SMARCC1Q92922 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SMARCC1Q92922 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.11□□□□□ -1.75
SMARCC1Q92922 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC4.11□□□□□ -1.75
SMARCC1Q92922 AL159153.1-201ENST00000619688 317 ntBASIC4.11□□□□□ -1.75
SMARCC1Q92922 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.11□□□□□ -1.75
SMARCC1Q92922 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SMARCC1Q92922 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.11□□□□□ -1.75
SMARCC1Q92922 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
SMARCC1Q92922 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SMARCC1Q92922 AL353746.1-201ENST00000566293 6881 ntBASIC4.1□□□□□ -1.75
SMARCC1Q92922 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SMARCC1Q92922 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SMARCC1Q92922 Y_RNA.64-201ENST00000362845 102 ntBASIC4.1□□□□□ -1.75
SMARCC1Q92922 RNU6-379P-201ENST00000363813 104 ntBASIC4.1□□□□□ -1.75
SMARCC1Q92922 Y_RNA.288-201ENST00000364854 92 ntBASIC4.1□□□□□ -1.75
SMARCC1Q92922 RNA5SP126-201ENST00000365092 109 ntBASIC4.1□□□□□ -1.75
SMARCC1Q92922 DEFB109C-201ENST00000382575 264 ntBASIC4.1□□□□□ -1.75
SMARCC1Q92922 DEFB109B-201ENST00000382656 264 ntBASIC4.1□□□□□ -1.75
SMARCC1Q92922 RNU6-708P-201ENST00000384217 107 ntBASIC4.1□□□□□ -1.75
SMARCC1Q92922 Y_RNA.471-201ENST00000384312 102 ntBASIC4.1□□□□□ -1.75
SMARCC1Q92922 RNU6-784P-201ENST00000384330 106 ntBASIC4.1□□□□□ -1.75
SMARCC1Q92922 Y_RNA.592-201ENST00000410274 109 ntBASIC4.1□□□□□ -1.75
SMARCC1Q92922 RN7SKP284-201ENST00000411002 343 ntBASIC4.1□□□□□ -1.75
SMARCC1Q92922 MTCO3P19-201ENST00000415864 321 ntBASIC4.1□□□□□ -1.75
SMARCC1Q92922 RNA5SP468-201ENST00000516782 93 ntBASIC4.1□□□□□ -1.75
SMARCC1Q92922 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.1□□□□□ -1.75
SMARCC1Q92922 MIR3162-201ENST00000581818 82 ntBASIC4.1□□□□□ -1.75
SMARCC1Q92922 AC020895.1-201ENST00000595362 272 ntBASIC4.1□□□□□ -1.75
SMARCC1Q92922 FTX_3.1-201ENST00000610451 147 ntBASIC4.1□□□□□ -1.75
SMARCC1Q92922 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
SMARCC1Q92922 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.1□□□□□ -1.75
SMARCC1Q92922 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
SMARCC1Q92922 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SMARCC1Q92922 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SMARCC1Q92922 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.09□□□□□ -1.75
SMARCC1Q92922 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.75
SMARCC1Q92922 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SMARCC1Q92922 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
SMARCC1Q92922 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
SMARCC1Q92922 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.09□□□□□ -1.75
SMARCC1Q92922 Y_RNA.214-201ENST00000364201 112 ntBASIC4.09□□□□□ -1.75
SMARCC1Q92922 SNORA54-201ENST00000384281 123 ntBASIC4.09□□□□□ -1.75
SMARCC1Q92922 BTF3L4P2-201ENST00000392798 346 ntBASIC4.09□□□□□ -1.75
SMARCC1Q92922 MIR1302-6-201ENST00000408466 90 ntBASIC4.09□□□□□ -1.75
SMARCC1Q92922 U3.37-201ENST00000408528 213 ntBASIC4.09□□□□□ -1.75
SMARCC1Q92922 RNA5SP31-201ENST00000411144 127 ntBASIC4.09□□□□□ -1.75
SMARCC1Q92922 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.09□□□□□ -1.75
SMARCC1Q92922 YPEL5P1-201ENST00000419731 367 ntBASIC4.09□□□□□ -1.75
SMARCC1Q92922 HMGN2P30-201ENST00000423237 256 ntBASIC4.09□□□□□ -1.75
SMARCC1Q92922 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.09□□□□□ -1.75
SMARCC1Q92922 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.09□□□□□ -1.75
SMARCC1Q92922 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.09□□□□□ -1.75
SMARCC1Q92922 RNA5SP356-201ENST00000515972 94 ntBASIC4.09□□□□□ -1.75
SMARCC1Q92922 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.09□□□□□ -1.75
SMARCC1Q92922 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SMARCC1Q92922 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SMARCC1Q92922 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
SMARCC1Q92922 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SMARCC1Q92922 RNU6-105P-201ENST00000363909 104 ntBASIC4.08□□□□□ -1.76
SMARCC1Q92922 Z98749.2-208ENST00000381646 500 ntBASIC4.08□□□□□ -1.76
SMARCC1Q92922 Y_RNA.405-201ENST00000383979 100 ntBASIC4.08□□□□□ -1.76
SMARCC1Q92922 RNU6-217P-201ENST00000384164 104 ntBASIC4.08□□□□□ -1.76
SMARCC1Q92922 Y_RNA.451-201ENST00000384200 100 ntBASIC4.08□□□□□ -1.76
SMARCC1Q92922 RNU6-472P-201ENST00000384299 107 ntBASIC4.08□□□□□ -1.76
SMARCC1Q92922 Y_RNA.524-201ENST00000384564 100 ntBASIC4.08□□□□□ -1.76
SMARCC1Q92922 Y_RNA.561-201ENST00000384694 100 ntBASIC4.08□□□□□ -1.76
SMARCC1Q92922 MIR184-201ENST00000384962 84 ntBASIC4.08□□□□□ -1.76
SMARCC1Q92922 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.08□□□□□ -1.76
SMARCC1Q92922 AC124916.1-201ENST00000444020 547 ntBASIC4.08□□□□□ -1.76
SMARCC1Q92922 HMGN2P16-201ENST00000456802 261 ntBASIC4.08□□□□□ -1.76
SMARCC1Q92922 RPL30P10-201ENST00000488148 337 ntBASIC4.08□□□□□ -1.76
SMARCC1Q92922 RN7SKP272-201ENST00000516988 232 ntBASIC4.08□□□□□ -1.76
SMARCC1Q92922 NDUFB9P3-201ENST00000521269 501 ntBASIC4.08□□□□□ -1.76
SMARCC1Q92922 AP004607.1-201ENST00000524456 203 ntBASIC4.08□□□□□ -1.76
SMARCC1Q92922 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.08□□□□□ -1.76
SMARCC1Q92922 uc_338.25-201ENST00000613756 156 ntBASIC4.08□□□□□ -1.76
SMARCC1Q92922 AC233263.6-201ENST00000631132 1963 ntBASIC4.08□□□□□ -1.76
SMARCC1Q92922 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
SMARCC1Q92922 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms