Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.54□□□□□ -2
TM9SF4Q92544 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TM9SF4Q92544 AC008669.1-201ENST00000565823 2178 ntBASIC2.53□□□□□ -2
TM9SF4Q92544 AC026241.1-201ENST00000517873 2142 ntBASIC2.53□□□□□ -2
TM9SF4Q92544 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.53□□□□□ -2
TM9SF4Q92544 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.53□□□□□ -2
TM9SF4Q92544 RNU6-78P-201ENST00000362897 107 ntBASIC2.53□□□□□ -2
TM9SF4Q92544 RNU6-428P-201ENST00000362942 107 ntBASIC2.53□□□□□ -2
TM9SF4Q92544 RNY4P36-201ENST00000391116 96 ntBASIC2.53□□□□□ -2
TM9SF4Q92544 BPY2DP-201ENST00000422208 265 ntBASIC2.53□□□□□ -2
TM9SF4Q92544 UBE2V1P4-201ENST00000425374 344 ntBASIC2.53□□□□□ -2
TM9SF4Q92544 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.53□□□□□ -2
TM9SF4Q92544 AC007677.1-201ENST00000445757 515 ntBASIC2.53□□□□□ -2
TM9SF4Q92544 AL513328.1-201ENST00000446460 224 ntBASIC2.53□□□□□ -2
TM9SF4Q92544 FTH1P25-201ENST00000447665 469 ntBASIC2.53□□□□□ -2
TM9SF4Q92544 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.53□□□□□ -2
TM9SF4Q92544 HMGN1P13-201ENST00000505795 138 ntBASIC2.53□□□□□ -2
TM9SF4Q92544 AC079140.5-201ENST00000507882 310 ntBASIC2.53□□□□□ -2
TM9SF4Q92544 AC116337.1-201ENST00000509680 687 ntBASIC2.53□□□□□ -2
TM9SF4Q92544 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.53□□□□□ -2
TM9SF4Q92544 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.53□□□□□ -2
TM9SF4Q92544 SNORA9.3-201ENST00000516383 129 ntBASIC2.53□□□□□ -2
TM9SF4Q92544 RNU6-1016P-201ENST00000516689 94 ntBASIC2.53□□□□□ -2
TM9SF4Q92544 AC004486.1-201ENST00000546846 233 ntBASIC2.53□□□□□ -2
TM9SF4Q92544 AC103996.1-201ENST00000555468 102 ntBASIC2.53□□□□□ -2
TM9SF4Q92544 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.53□□□□□ -2
TM9SF4Q92544 ZNF861P-201ENST00000588126 639 ntBASIC2.53□□□□□ -2
TM9SF4Q92544 AC044792.1-201ENST00000593294 196 ntBASIC2.53□□□□□ -2
TM9SF4Q92544 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.53□□□□□ -2
TM9SF4Q92544 AC011890.2-201ENST00000613393 294 ntBASIC2.53□□□□□ -2
TM9SF4Q92544 AL161423.1-201ENST00000613700 262 ntBASIC2.53□□□□□ -2
TM9SF4Q92544 AC110079.1-202ENST00000635213 138 ntBASIC2.53□□□□□ -2
TM9SF4Q92544 AC099654.10-201ENST00000640395 161 ntBASIC2.53□□□□□ -2
TM9SF4Q92544 AC092593.1-201ENST00000515413 1815 ntBASIC2.53□□□□□ -2
TM9SF4Q92544 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.53□□□□□ -2.01
TM9SF4Q92544 SNORD62.1-201ENST00000362541 86 ntBASIC2.52□□□□□ -2.01
TM9SF4Q92544 RNU6-942P-201ENST00000363002 107 ntBASIC2.52□□□□□ -2.01
TM9SF4Q92544 RNU6-1188P-201ENST00000363795 107 ntBASIC2.52□□□□□ -2.01
TM9SF4Q92544 Y_RNA.460-201ENST00000384255 102 ntBASIC2.52□□□□□ -2.01
TM9SF4Q92544 RNU6-198P-201ENST00000384258 104 ntBASIC2.52□□□□□ -2.01
TM9SF4Q92544 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.52□□□□□ -2.01
TM9SF4Q92544 RNU6-325P-201ENST00000411132 105 ntBASIC2.52□□□□□ -2.01
TM9SF4Q92544 AC023141.4-201ENST00000412031 328 ntBASIC2.52□□□□□ -2.01
TM9SF4Q92544 HMGN2P35-201ENST00000412164 270 ntBASIC2.52□□□□□ -2.01
TM9SF4Q92544 NDUFS5P4-201ENST00000412983 318 ntBASIC2.52□□□□□ -2.01
TM9SF4Q92544 AL354751.2-201ENST00000415471 210 ntBASIC2.52□□□□□ -2.01
TM9SF4Q92544 AL365496.1-201ENST00000426885 215 ntBASIC2.52□□□□□ -2.01
TM9SF4Q92544 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.52□□□□□ -2.01
TM9SF4Q92544 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.52□□□□□ -2.01
TM9SF4Q92544 AC026782.1-201ENST00000512952 449 ntBASIC2.52□□□□□ -2.01
TM9SF4Q92544 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.52□□□□□ -2.01
TM9SF4Q92544 Y_RNA.670-201ENST00000516255 105 ntBASIC2.52□□□□□ -2.01
TM9SF4Q92544 Y_RNA.701-201ENST00000516812 110 ntBASIC2.52□□□□□ -2.01
TM9SF4Q92544 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.52□□□□□ -2.01
TM9SF4Q92544 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.52□□□□□ -2.01
TM9SF4Q92544 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.52□□□□□ -2.01
TM9SF4Q92544 MIR3124-201ENST00000582636 67 ntBASIC2.52□□□□□ -2.01
TM9SF4Q92544 MIR3605-201ENST00000583214 100 ntBASIC2.52□□□□□ -2.01
TM9SF4Q92544 MIR4719-201ENST00000585233 84 ntBASIC2.52□□□□□ -2.01
TM9SF4Q92544 AL353621.2-201ENST00000605340 133 ntBASIC2.52□□□□□ -2.01
TM9SF4Q92544 AC124303.1-201ENST00000605703 360 ntBASIC2.52□□□□□ -2.01
TM9SF4Q92544 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.52□□□□□ -2.01
TM9SF4Q92544 MIR6134-201ENST00000617606 109 ntBASIC2.52□□□□□ -2.01
TM9SF4Q92544 AC098657.3-201ENST00000620434 263 ntBASIC2.52□□□□□ -2.01
TM9SF4Q92544 AC244517.12-201ENST00000623581 663 ntBASIC2.52□□□□□ -2.01
TM9SF4Q92544 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.52□□□□□ -2.01
TM9SF4Q92544 KPNA2P1-201ENST00000458289 1591 ntBASIC2.52□□□□□ -2.01
TM9SF4Q92544 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
TM9SF4Q92544 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
TM9SF4Q92544 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
TM9SF4Q92544 CDC27P3-201ENST00000635418 1910 ntBASIC2.51□□□□□ -2.01
TM9SF4Q92544 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.51□□□□□ -2.01
TM9SF4Q92544 Y_RNA.138-201ENST00000363462 102 ntBASIC2.51□□□□□ -2.01
TM9SF4Q92544 RNU1-100P-201ENST00000365255 165 ntBASIC2.51□□□□□ -2.01
TM9SF4Q92544 Y_RNA.404-201ENST00000383978 102 ntBASIC2.51□□□□□ -2.01
TM9SF4Q92544 Y_RNA.482-201ENST00000384377 111 ntBASIC2.51□□□□□ -2.01
TM9SF4Q92544 Y_RNA.579-201ENST00000390939 94 ntBASIC2.51□□□□□ -2.01
TM9SF4Q92544 U3.37-201ENST00000408528 213 ntBASIC2.51□□□□□ -2.01
TM9SF4Q92544 AL030996.1-201ENST00000411430 235 ntBASIC2.51□□□□□ -2.01
TM9SF4Q92544 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.51□□□□□ -2.01
TM9SF4Q92544 TOMM20P4-201ENST00000427861 435 ntBASIC2.51□□□□□ -2.01
TM9SF4Q92544 USP9YP30-201ENST00000430729 455 ntBASIC2.51□□□□□ -2.01
TM9SF4Q92544 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.51□□□□□ -2.01
TM9SF4Q92544 HIGD1AP2-201ENST00000446367 280 ntBASIC2.51□□□□□ -2.01
TM9SF4Q92544 HMGN2P10-201ENST00000448085 265 ntBASIC2.51□□□□□ -2.01
TM9SF4Q92544 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
TM9SF4Q92544 AP000705.1-201ENST00000454567 350 ntBASIC2.51□□□□□ -2.01
TM9SF4Q92544 MTCO3P10-201ENST00000455912 772 ntBASIC2.51□□□□□ -2.01
TM9SF4Q92544 RPL7P42-201ENST00000481005 679 ntBASIC2.51□□□□□ -2.01
TM9SF4Q92544 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.51□□□□□ -2.01
TM9SF4Q92544 AC018437.1-201ENST00000492214 406 ntBASIC2.51□□□□□ -2.01
TM9SF4Q92544 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.51□□□□□ -2.01
TM9SF4Q92544 AIG1P1-201ENST00000503376 148 ntBASIC2.51□□□□□ -2.01
TM9SF4Q92544 AC005741.1-201ENST00000511094 432 ntBASIC2.51□□□□□ -2.01
TM9SF4Q92544 PTP4A1P4-201ENST00000512479 322 ntBASIC2.51□□□□□ -2.01
TM9SF4Q92544 RNU6-581P-201ENST00000516214 105 ntBASIC2.51□□□□□ -2.01
TM9SF4Q92544 LINC00933-203ENST00000559812 219 ntBASIC2.51□□□□□ -2.01
TM9SF4Q92544 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.51□□□□□ -2.01
TM9SF4Q92544 MIR3670-2-201ENST00000582974 65 ntBASIC2.51□□□□□ -2.01
TM9SF4Q92544 MIR3670-1-201ENST00000584160 65 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms