Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 RN7SL283P-201ENST00000489055 303 ntBASIC3.3□□□□□ -1.88
RAPGEF4Q8WZA2 AC234781.5-201ENST00000508429 271 ntBASIC3.3□□□□□ -1.88
RAPGEF4Q8WZA2 MTCYBP40-201ENST00000509390 1135 ntBASIC3.3□□□□□ -1.88
RAPGEF4Q8WZA2 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.3□□□□□ -1.88
RAPGEF4Q8WZA2 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.3□□□□□ -1.88
RAPGEF4Q8WZA2 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.3□□□□□ -1.88
RAPGEF4Q8WZA2 HMGN2P15-201ENST00000585707 270 ntBASIC3.3□□□□□ -1.88
RAPGEF4Q8WZA2 AC124303.1-201ENST00000605703 360 ntBASIC3.3□□□□□ -1.88
RAPGEF4Q8WZA2 AL627309.6-201ENST00000606857 840 ntBASIC3.3□□□□□ -1.88
RAPGEF4Q8WZA2 AL133215.3-201ENST00000609801 448 ntBASIC3.3□□□□□ -1.88
RAPGEF4Q8WZA2 AC244517.12-201ENST00000623581 663 ntBASIC3.3□□□□□ -1.88
RAPGEF4Q8WZA2 KPNA2P1-201ENST00000458289 1591 ntBASIC3.29□□□□□ -1.88
RAPGEF4Q8WZA2 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RAPGEF4Q8WZA2 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RAPGEF4Q8WZA2 MAPK10-322ENST00000641485 4530 ntBASIC3.29□□□□□ -1.88
RAPGEF4Q8WZA2 RNU1-100P-201ENST00000365255 165 ntBASIC3.29□□□□□ -1.88
RAPGEF4Q8WZA2 RNU6-827P-201ENST00000365553 106 ntBASIC3.29□□□□□ -1.88
RAPGEF4Q8WZA2 Y_RNA.394-201ENST00000383942 103 ntBASIC3.29□□□□□ -1.88
RAPGEF4Q8WZA2 RNU6-43P-201ENST00000384302 107 ntBASIC3.29□□□□□ -1.88
RAPGEF4Q8WZA2 RNU6-1106P-201ENST00000390845 107 ntBASIC3.29□□□□□ -1.88
RAPGEF4Q8WZA2 RPS29P13-201ENST00000402041 169 ntBASIC3.29□□□□□ -1.88
RAPGEF4Q8WZA2 AL354751.2-201ENST00000415471 210 ntBASIC3.29□□□□□ -1.88
RAPGEF4Q8WZA2 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RAPGEF4Q8WZA2 TRIAP1P1-201ENST00000427062 225 ntBASIC3.29□□□□□ -1.88
RAPGEF4Q8WZA2 RPS15AP10-201ENST00000432472 382 ntBASIC3.29□□□□□ -1.88
RAPGEF4Q8WZA2 AC007677.1-201ENST00000445757 515 ntBASIC3.29□□□□□ -1.88
RAPGEF4Q8WZA2 AL031274.1-201ENST00000450334 232 ntBASIC3.29□□□□□ -1.88
RAPGEF4Q8WZA2 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.29□□□□□ -1.88
RAPGEF4Q8WZA2 AC006026.2-201ENST00000457376 180 ntBASIC3.29□□□□□ -1.88
RAPGEF4Q8WZA2 SNORA43.2-201ENST00000516652 128 ntBASIC3.29□□□□□ -1.88
RAPGEF4Q8WZA2 AC021739.1-201ENST00000559631 174 ntBASIC3.29□□□□□ -1.88
RAPGEF4Q8WZA2 MIR4506-201ENST00000584693 77 ntBASIC3.29□□□□□ -1.88
RAPGEF4Q8WZA2 AL353621.2-201ENST00000605340 133 ntBASIC3.29□□□□□ -1.88
RAPGEF4Q8WZA2 AP000654.2-201ENST00000605633 586 ntBASIC3.29□□□□□ -1.88
RAPGEF4Q8WZA2 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RAPGEF4Q8WZA2 AC084781.2-201ENST00000615568 161 ntBASIC3.29□□□□□ -1.88
RAPGEF4Q8WZA2 MTND5P19-201ENST00000424872 1794 ntBASIC3.29□□□□□ -1.88
RAPGEF4Q8WZA2 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RAPGEF4Q8WZA2 MTND4P23-201ENST00000447723 1363 ntBASIC3.28□□□□□ -1.88
RAPGEF4Q8WZA2 MAPK10-362ENST00000641864 4484 ntBASIC3.28□□□□□ -1.88
RAPGEF4Q8WZA2 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RAPGEF4Q8WZA2 Y_RNA.151-201ENST00000363566 112 ntBASIC3.28□□□□□ -1.88
RAPGEF4Q8WZA2 MIR517A-201ENST00000385001 87 ntBASIC3.28□□□□□ -1.88
RAPGEF4Q8WZA2 MIR504-201ENST00000385065 83 ntBASIC3.28□□□□□ -1.88
RAPGEF4Q8WZA2 RNA5SP252-201ENST00000391131 119 ntBASIC3.28□□□□□ -1.88
RAPGEF4Q8WZA2 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.28□□□□□ -1.88
RAPGEF4Q8WZA2 RNU6-325P-201ENST00000411132 105 ntBASIC3.28□□□□□ -1.88
RAPGEF4Q8WZA2 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.28□□□□□ -1.88
RAPGEF4Q8WZA2 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.28□□□□□ -1.88
RAPGEF4Q8WZA2 DAP3P1-201ENST00000441522 278 ntBASIC3.28□□□□□ -1.88
RAPGEF4Q8WZA2 AC104389.3-201ENST00000445629 235 ntBASIC3.28□□□□□ -1.88
RAPGEF4Q8WZA2 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.28□□□□□ -1.88
RAPGEF4Q8WZA2 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.28□□□□□ -1.88
RAPGEF4Q8WZA2 AC005741.1-201ENST00000511094 432 ntBASIC3.28□□□□□ -1.88
RAPGEF4Q8WZA2 PTP4A1P4-201ENST00000512479 322 ntBASIC3.28□□□□□ -1.88
RAPGEF4Q8WZA2 Y_RNA.708-201ENST00000516950 96 ntBASIC3.28□□□□□ -1.88
RAPGEF4Q8WZA2 RNU6-711P-201ENST00000517255 106 ntBASIC3.28□□□□□ -1.88
RAPGEF4Q8WZA2 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.28□□□□□ -1.88
RAPGEF4Q8WZA2 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.28□□□□□ -1.88
RAPGEF4Q8WZA2 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.28□□□□□ -1.88
RAPGEF4Q8WZA2 VN1R107P-201ENST00000601784 209 ntBASIC3.28□□□□□ -1.88
RAPGEF4Q8WZA2 AC009314.1-201ENST00000603871 304 ntBASIC3.28□□□□□ -1.88
RAPGEF4Q8WZA2 AC019193.3-201ENST00000609144 554 ntBASIC3.28□□□□□ -1.88
RAPGEF4Q8WZA2 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.28□□□□□ -1.88
RAPGEF4Q8WZA2 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.28□□□□□ -1.88
RAPGEF4Q8WZA2 AL669831.3-213ENST00000636676 183 ntBASIC3.28□□□□□ -1.88
RAPGEF4Q8WZA2 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.89
RAPGEF4Q8WZA2 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.27□□□□□ -1.89
RAPGEF4Q8WZA2 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.27□□□□□ -1.89
RAPGEF4Q8WZA2 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
RAPGEF4Q8WZA2 Y_RNA.187-201ENST00000363918 113 ntBASIC3.27□□□□□ -1.89
RAPGEF4Q8WZA2 RNU6-596P-201ENST00000365395 98 ntBASIC3.27□□□□□ -1.89
RAPGEF4Q8WZA2 SNORD42.2-201ENST00000365570 69 ntBASIC3.27□□□□□ -1.89
RAPGEF4Q8WZA2 Y_RNA.579-201ENST00000390939 94 ntBASIC3.27□□□□□ -1.89
RAPGEF4Q8WZA2 SNORA75.4-201ENST00000391278 119 ntBASIC3.27□□□□□ -1.89
RAPGEF4Q8WZA2 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
RAPGEF4Q8WZA2 Y_RNA.594-201ENST00000410373 140 ntBASIC3.27□□□□□ -1.89
RAPGEF4Q8WZA2 RNU6-1050P-201ENST00000410388 107 ntBASIC3.27□□□□□ -1.89
RAPGEF4Q8WZA2 RN7SKP223-201ENST00000410582 62 ntBASIC3.27□□□□□ -1.89
RAPGEF4Q8WZA2 AC023141.4-201ENST00000412031 328 ntBASIC3.27□□□□□ -1.89
RAPGEF4Q8WZA2 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.27□□□□□ -1.89
RAPGEF4Q8WZA2 USP9YP30-201ENST00000430729 455 ntBASIC3.27□□□□□ -1.89
RAPGEF4Q8WZA2 PCMTD1P1-201ENST00000455560 355 ntBASIC3.27□□□□□ -1.89
RAPGEF4Q8WZA2 Y_RNA.639-201ENST00000458981 102 ntBASIC3.27□□□□□ -1.89
RAPGEF4Q8WZA2 Y_RNA.653-201ENST00000459091 95 ntBASIC3.27□□□□□ -1.89
RAPGEF4Q8WZA2 RNU6-377P-201ENST00000515965 102 ntBASIC3.27□□□□□ -1.89
RAPGEF4Q8WZA2 Y_RNA.670-201ENST00000516255 105 ntBASIC3.27□□□□□ -1.89
RAPGEF4Q8WZA2 AC093249.1-201ENST00000567049 203 ntBASIC3.27□□□□□ -1.89
RAPGEF4Q8WZA2 AC011494.1-201ENST00000596454 237 ntBASIC3.27□□□□□ -1.89
RAPGEF4Q8WZA2 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.27□□□□□ -1.89
RAPGEF4Q8WZA2 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.27□□□□□ -1.89
RAPGEF4Q8WZA2 AL161431.1-201ENST00000618966 4205 ntBASIC3.27□□□□□ -1.89
RAPGEF4Q8WZA2 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.26□□□□□ -1.89
RAPGEF4Q8WZA2 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RAPGEF4Q8WZA2 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RAPGEF4Q8WZA2 OR56A5-201ENST00000340110 738 ntBASIC3.26□□□□□ -1.89
RAPGEF4Q8WZA2 RNU6-1227P-201ENST00000383981 107 ntBASIC3.26□□□□□ -1.89
RAPGEF4Q8WZA2 RNU6-306P-201ENST00000384617 107 ntBASIC3.26□□□□□ -1.89
RAPGEF4Q8WZA2 RNU6-310P-201ENST00000384655 107 ntBASIC3.26□□□□□ -1.89
RAPGEF4Q8WZA2 AL133396.1-201ENST00000432048 687 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms