Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 Y_RNA.384-201ENST00000383909 102 ntBASIC2.89□□□□□ -1.95
HMGB4Q8WW32 RNU6-43P-201ENST00000384302 107 ntBASIC2.89□□□□□ -1.95
HMGB4Q8WW32 Y_RNA.509-201ENST00000384506 99 ntBASIC2.89□□□□□ -1.95
HMGB4Q8WW32 RNU6-1222P-201ENST00000384615 107 ntBASIC2.89□□□□□ -1.95
HMGB4Q8WW32 MIR521-1-201ENST00000384902 87 ntBASIC2.89□□□□□ -1.95
HMGB4Q8WW32 RNU2-23P-201ENST00000410545 195 ntBASIC2.89□□□□□ -1.95
HMGB4Q8WW32 RNU2-52P-201ENST00000410680 190 ntBASIC2.89□□□□□ -1.95
HMGB4Q8WW32 RNU6-1328P-201ENST00000410938 106 ntBASIC2.89□□□□□ -1.95
HMGB4Q8WW32 Z98742.2-201ENST00000431564 187 ntBASIC2.89□□□□□ -1.95
HMGB4Q8WW32 RPL39P29-201ENST00000447779 157 ntBASIC2.89□□□□□ -1.95
HMGB4Q8WW32 MTND5P30-201ENST00000452896 1731 ntBASIC2.89□□□□□ -1.95
HMGB4Q8WW32 AC112771.1-201ENST00000463581 102 ntBASIC2.89□□□□□ -1.95
HMGB4Q8WW32 RPL30P12-201ENST00000474666 353 ntBASIC2.89□□□□□ -1.95
HMGB4Q8WW32 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.89□□□□□ -1.95
HMGB4Q8WW32 RNU6-559P-201ENST00000516151 98 ntBASIC2.89□□□□□ -1.95
HMGB4Q8WW32 AC109329.1-201ENST00000518744 317 ntBASIC2.89□□□□□ -1.95
HMGB4Q8WW32 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.89□□□□□ -1.95
HMGB4Q8WW32 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.89□□□□□ -1.95
HMGB4Q8WW32 AC245166.1-201ENST00000521012 253 ntBASIC2.89□□□□□ -1.95
HMGB4Q8WW32 HPRT1P3-201ENST00000539521 576 ntBASIC2.89□□□□□ -1.95
HMGB4Q8WW32 AC079600.2-201ENST00000550076 130 ntBASIC2.89□□□□□ -1.95
HMGB4Q8WW32 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.89□□□□□ -1.95
HMGB4Q8WW32 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.89□□□□□ -1.95
HMGB4Q8WW32 MIR4435-1-201ENST00000582552 80 ntBASIC2.89□□□□□ -1.95
HMGB4Q8WW32 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
HMGB4Q8WW32 MIR4765-201ENST00000585007 77 ntBASIC2.89□□□□□ -1.95
HMGB4Q8WW32 AL356157.2-201ENST00000605122 111 ntBASIC2.89□□□□□ -1.95
HMGB4Q8WW32 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.89□□□□□ -1.95
HMGB4Q8WW32 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.89□□□□□ -1.95
HMGB4Q8WW32 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.88□□□□□ -1.95
HMGB4Q8WW32 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.88□□□□□ -1.95
HMGB4Q8WW32 RNU4-79P-201ENST00000362764 141 ntBASIC2.88□□□□□ -1.95
HMGB4Q8WW32 Y_RNA.67-201ENST00000362870 100 ntBASIC2.88□□□□□ -1.95
HMGB4Q8WW32 RNU6-1059P-201ENST00000363752 98 ntBASIC2.88□□□□□ -1.95
HMGB4Q8WW32 Y_RNA.594-201ENST00000410373 140 ntBASIC2.88□□□□□ -1.95
HMGB4Q8WW32 RNU6-370P-201ENST00000411008 104 ntBASIC2.88□□□□□ -1.95
HMGB4Q8WW32 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.88□□□□□ -1.95
HMGB4Q8WW32 AC138623.1-201ENST00000418060 216 ntBASIC2.88□□□□□ -1.95
HMGB4Q8WW32 RPL23AP95-201ENST00000426806 265 ntBASIC2.88□□□□□ -1.95
HMGB4Q8WW32 ARL5AP4-201ENST00000430731 512 ntBASIC2.88□□□□□ -1.95
HMGB4Q8WW32 MTND3P23-201ENST00000431980 347 ntBASIC2.88□□□□□ -1.95
HMGB4Q8WW32 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.88□□□□□ -1.95
HMGB4Q8WW32 AC008549.1-201ENST00000512900 643 ntBASIC2.88□□□□□ -1.95
HMGB4Q8WW32 SMURF2P1-201ENST00000514992 481 ntBASIC2.88□□□□□ -1.95
HMGB4Q8WW32 Y_RNA.675-201ENST00000516389 149 ntBASIC2.88□□□□□ -1.95
HMGB4Q8WW32 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.88□□□□□ -1.95
HMGB4Q8WW32 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.88□□□□□ -1.95
HMGB4Q8WW32 FRG2DP-202ENST00000566967 323 ntBASIC2.88□□□□□ -1.95
HMGB4Q8WW32 AC105137.2-201ENST00000569073 466 ntBASIC2.88□□□□□ -1.95
HMGB4Q8WW32 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.88□□□□□ -1.95
HMGB4Q8WW32 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.88□□□□□ -1.95
HMGB4Q8WW32 AL159153.1-201ENST00000619688 317 ntBASIC2.88□□□□□ -1.95
HMGB4Q8WW32 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.88□□□□□ -1.95
HMGB4Q8WW32 AC007792.1-201ENST00000623023 402 ntBASIC2.88□□□□□ -1.95
HMGB4Q8WW32 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
HMGB4Q8WW32 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
HMGB4Q8WW32 KPNA2P1-201ENST00000458289 1591 ntBASIC2.87□□□□□ -1.95
HMGB4Q8WW32 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.87□□□□□ -1.95
HMGB4Q8WW32 AC010329.5-201ENST00000623497 2174 ntBASIC2.87□□□□□ -1.95
HMGB4Q8WW32 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
HMGB4Q8WW32 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
HMGB4Q8WW32 RNU6-1285P-201ENST00000363480 105 ntBASIC2.87□□□□□ -1.95
HMGB4Q8WW32 RNU6-1141P-201ENST00000364520 107 ntBASIC2.87□□□□□ -1.95
HMGB4Q8WW32 RNU6-596P-201ENST00000365395 98 ntBASIC2.87□□□□□ -1.95
HMGB4Q8WW32 RNU6-842P-201ENST00000384269 107 ntBASIC2.87□□□□□ -1.95
HMGB4Q8WW32 Y_RNA.473-201ENST00000384333 102 ntBASIC2.87□□□□□ -1.95
HMGB4Q8WW32 RNU6-1297P-201ENST00000384415 104 ntBASIC2.87□□□□□ -1.95
HMGB4Q8WW32 BTF3L4P2-201ENST00000392798 346 ntBASIC2.87□□□□□ -1.95
HMGB4Q8WW32 RNU6-1050P-201ENST00000410388 107 ntBASIC2.87□□□□□ -1.95
HMGB4Q8WW32 Z82205.1-201ENST00000428456 297 ntBASIC2.87□□□□□ -1.95
HMGB4Q8WW32 Y_RNA.632-201ENST00000459189 102 ntBASIC2.87□□□□□ -1.95
HMGB4Q8WW32 AC008571.1-201ENST00000467232 300 ntBASIC2.87□□□□□ -1.95
HMGB4Q8WW32 AC091874.1-201ENST00000511402 339 ntBASIC2.87□□□□□ -1.95
HMGB4Q8WW32 ACA59.1-201ENST00000515966 143 ntBASIC2.87□□□□□ -1.95
HMGB4Q8WW32 Y_RNA.670-201ENST00000516255 105 ntBASIC2.87□□□□□ -1.95
HMGB4Q8WW32 Y_RNA.708-201ENST00000516950 96 ntBASIC2.87□□□□□ -1.95
HMGB4Q8WW32 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.87□□□□□ -1.95
HMGB4Q8WW32 APOOP3-201ENST00000536787 586 ntBASIC2.87□□□□□ -1.95
HMGB4Q8WW32 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.87□□□□□ -1.95
HMGB4Q8WW32 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.87□□□□□ -1.95
HMGB4Q8WW32 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.87□□□□□ -1.95
HMGB4Q8WW32 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.87□□□□□ -1.95
HMGB4Q8WW32 AC011494.1-201ENST00000596454 237 ntBASIC2.87□□□□□ -1.95
HMGB4Q8WW32 AP000654.2-201ENST00000605633 586 ntBASIC2.87□□□□□ -1.95
HMGB4Q8WW32 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
HMGB4Q8WW32 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.87□□□□□ -1.95
HMGB4Q8WW32 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.87□□□□□ -1.95
HMGB4Q8WW32 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.87□□□□□ -1.95
HMGB4Q8WW32 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HMGB4Q8WW32 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
HMGB4Q8WW32 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.86□□□□□ -1.95
HMGB4Q8WW32 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.86□□□□□ -1.95
HMGB4Q8WW32 Y_RNA.58-201ENST00000362807 102 ntBASIC2.86□□□□□ -1.95
HMGB4Q8WW32 RNU6-529P-201ENST00000363383 104 ntBASIC2.86□□□□□ -1.95
HMGB4Q8WW32 Y_RNA.154-201ENST00000363624 102 ntBASIC2.86□□□□□ -1.95
HMGB4Q8WW32 RNU6-1188P-201ENST00000363795 107 ntBASIC2.86□□□□□ -1.95
HMGB4Q8WW32 RNY3P1-201ENST00000365085 102 ntBASIC2.86□□□□□ -1.95
HMGB4Q8WW32 RNY3-201ENST00000365484 102 ntBASIC2.86□□□□□ -1.95
HMGB4Q8WW32 Y_RNA.490-201ENST00000384413 102 ntBASIC2.86□□□□□ -1.95
HMGB4Q8WW32 RNU6-174P-201ENST00000410406 106 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms