Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 U8.11-201ENST00000384699 133 ntBASIC4.54□□□□□ -1.68
NEDD1Q8NHV4 U8.12-201ENST00000384701 133 ntBASIC4.54□□□□□ -1.68
NEDD1Q8NHV4 MIR513A2-201ENST00000385249 127 ntBASIC4.54□□□□□ -1.68
NEDD1Q8NHV4 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.54□□□□□ -1.68
NEDD1Q8NHV4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.54□□□□□ -1.68
NEDD1Q8NHV4 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.54□□□□□ -1.68
NEDD1Q8NHV4 U8.18-201ENST00000459285 133 ntBASIC4.54□□□□□ -1.68
NEDD1Q8NHV4 S100A11P1-201ENST00000477525 312 ntBASIC4.54□□□□□ -1.68
NEDD1Q8NHV4 SNORA67.7-201ENST00000516664 135 ntBASIC4.54□□□□□ -1.68
NEDD1Q8NHV4 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.54□□□□□ -1.68
NEDD1Q8NHV4 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC4.54□□□□□ -1.68
NEDD1Q8NHV4 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.54□□□□□ -1.68
NEDD1Q8NHV4 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.54□□□□□ -1.68
NEDD1Q8NHV4 AL161912.2-201ENST00000565707 3007 ntBASIC4.54□□□□□ -1.68
NEDD1Q8NHV4 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.53□□□□□ -1.68
NEDD1Q8NHV4 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NEDD1Q8NHV4 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
NEDD1Q8NHV4 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.53□□□□□ -1.68
NEDD1Q8NHV4 MIR448-201ENST00000362131 111 ntBASIC4.53□□□□□ -1.68
NEDD1Q8NHV4 Y_RNA.35-201ENST00000362601 101 ntBASIC4.53□□□□□ -1.68
NEDD1Q8NHV4 RNU6-1164P-201ENST00000364428 107 ntBASIC4.53□□□□□ -1.68
NEDD1Q8NHV4 RNU6-915P-201ENST00000364943 103 ntBASIC4.53□□□□□ -1.68
NEDD1Q8NHV4 RNU6-768P-201ENST00000384683 107 ntBASIC4.53□□□□□ -1.68
NEDD1Q8NHV4 RNU6-541P-201ENST00000384709 110 ntBASIC4.53□□□□□ -1.68
NEDD1Q8NHV4 MIR708-201ENST00000390708 88 ntBASIC4.53□□□□□ -1.68
NEDD1Q8NHV4 Y_RNA.630-201ENST00000411370 108 ntBASIC4.53□□□□□ -1.68
NEDD1Q8NHV4 AL513331.1-201ENST00000411908 397 ntBASIC4.53□□□□□ -1.68
NEDD1Q8NHV4 AC010095.1-201ENST00000443543 144 ntBASIC4.53□□□□□ -1.68
NEDD1Q8NHV4 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.53□□□□□ -1.68
NEDD1Q8NHV4 RPS29P24-201ENST00000486345 171 ntBASIC4.53□□□□□ -1.68
NEDD1Q8NHV4 Y_RNA.677-201ENST00000516401 85 ntBASIC4.53□□□□□ -1.68
NEDD1Q8NHV4 RNU6-58P-201ENST00000517143 103 ntBASIC4.53□□□□□ -1.68
NEDD1Q8NHV4 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.53□□□□□ -1.68
NEDD1Q8NHV4 MIR3158-1-201ENST00000583596 81 ntBASIC4.53□□□□□ -1.68
NEDD1Q8NHV4 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.53□□□□□ -1.68
NEDD1Q8NHV4 AL121772.2-201ENST00000614331 297 ntBASIC4.53□□□□□ -1.68
NEDD1Q8NHV4 AC241585.2-209ENST00000638217 143 ntBASIC4.53□□□□□ -1.68
NEDD1Q8NHV4 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NEDD1Q8NHV4 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NEDD1Q8NHV4 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.52□□□□□ -1.69
NEDD1Q8NHV4 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NEDD1Q8NHV4 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
NEDD1Q8NHV4 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
NEDD1Q8NHV4 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
NEDD1Q8NHV4 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
NEDD1Q8NHV4 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.52□□□□□ -1.69
NEDD1Q8NHV4 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NEDD1Q8NHV4 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NEDD1Q8NHV4 RNU6-78P-201ENST00000362897 107 ntBASIC4.52□□□□□ -1.69
NEDD1Q8NHV4 RNU5E-7P-201ENST00000365290 117 ntBASIC4.52□□□□□ -1.69
NEDD1Q8NHV4 RNU6-1279P-201ENST00000383917 103 ntBASIC4.52□□□□□ -1.69
NEDD1Q8NHV4 SNORA29-201ENST00000384183 140 ntBASIC4.52□□□□□ -1.69
NEDD1Q8NHV4 RNU6-166P-201ENST00000384371 107 ntBASIC4.52□□□□□ -1.69
NEDD1Q8NHV4 MIR626-201ENST00000385032 94 ntBASIC4.52□□□□□ -1.69
NEDD1Q8NHV4 SNORA26.2-201ENST00000390922 122 ntBASIC4.52□□□□□ -1.69
NEDD1Q8NHV4 RNU6ATAC-201ENST00000408749 126 ntBASIC4.52□□□□□ -1.69
NEDD1Q8NHV4 RNU6-588P-201ENST00000410281 105 ntBASIC4.52□□□□□ -1.69
NEDD1Q8NHV4 SNORA57.3-201ENST00000411095 141 ntBASIC4.52□□□□□ -1.69
NEDD1Q8NHV4 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
NEDD1Q8NHV4 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.52□□□□□ -1.69
NEDD1Q8NHV4 RNU6-762P-201ENST00000517107 102 ntBASIC4.52□□□□□ -1.69
NEDD1Q8NHV4 AL161713.1-201ENST00000555538 145 ntBASIC4.52□□□□□ -1.69
NEDD1Q8NHV4 AL591424.2-201ENST00000617023 128 ntBASIC4.52□□□□□ -1.69
NEDD1Q8NHV4 AC091932.3-201ENST00000624223 323 ntBASIC4.52□□□□□ -1.69
NEDD1Q8NHV4 U6.95-201ENST00000636931 70 ntBASIC4.52□□□□□ -1.69
NEDD1Q8NHV4 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NEDD1Q8NHV4 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
NEDD1Q8NHV4 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NEDD1Q8NHV4 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
NEDD1Q8NHV4 AC018529.3-201ENST00000624212 2254 ntBASIC4.52□□□□□ -1.69
NEDD1Q8NHV4 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NEDD1Q8NHV4 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NEDD1Q8NHV4 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.51□□□□□ -1.69
NEDD1Q8NHV4 AC116096.1-201ENST00000566804 2314 ntBASIC4.51□□□□□ -1.69
NEDD1Q8NHV4 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
NEDD1Q8NHV4 RNA5SP124-201ENST00000362739 110 ntBASIC4.51□□□□□ -1.69
NEDD1Q8NHV4 RNU6-105P-201ENST00000363909 104 ntBASIC4.51□□□□□ -1.69
NEDD1Q8NHV4 RNU6-801P-201ENST00000364087 105 ntBASIC4.51□□□□□ -1.69
NEDD1Q8NHV4 RNU6-882P-201ENST00000391025 103 ntBASIC4.51□□□□□ -1.69
NEDD1Q8NHV4 SNORA40C-201ENST00000391285 128 ntBASIC4.51□□□□□ -1.69
NEDD1Q8NHV4 SNORA48.7-201ENST00000391302 135 ntBASIC4.51□□□□□ -1.69
NEDD1Q8NHV4 AL591419.1-201ENST00000427423 339 ntBASIC4.51□□□□□ -1.69
NEDD1Q8NHV4 AL135790.2-201ENST00000437701 267 ntBASIC4.51□□□□□ -1.69
NEDD1Q8NHV4 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.51□□□□□ -1.69
NEDD1Q8NHV4 AC124916.1-201ENST00000444020 547 ntBASIC4.51□□□□□ -1.69
NEDD1Q8NHV4 FABP5P15-201ENST00000453566 214 ntBASIC4.51□□□□□ -1.69
NEDD1Q8NHV4 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.51□□□□□ -1.69
NEDD1Q8NHV4 AL133162.1-201ENST00000463228 453 ntBASIC4.51□□□□□ -1.69
NEDD1Q8NHV4 RPL21P129-201ENST00000491732 478 ntBASIC4.51□□□□□ -1.69
NEDD1Q8NHV4 AP003327.1-201ENST00000529684 127 ntBASIC4.51□□□□□ -1.69
NEDD1Q8NHV4 MIR3646-201ENST00000578301 84 ntBASIC4.51□□□□□ -1.69
NEDD1Q8NHV4 MIR4458-201ENST00000578872 75 ntBASIC4.51□□□□□ -1.69
NEDD1Q8NHV4 MIR3121-201ENST00000579680 77 ntBASIC4.51□□□□□ -1.69
NEDD1Q8NHV4 AL391813.1-201ENST00000603098 260 ntBASIC4.51□□□□□ -1.69
NEDD1Q8NHV4 AC004467.1-201ENST00000615678 330 ntBASIC4.51□□□□□ -1.69
NEDD1Q8NHV4 AC006133.1-201ENST00000617106 264 ntBASIC4.51□□□□□ -1.69
NEDD1Q8NHV4 AL034408.1-202ENST00000636088 415 ntBASIC4.51□□□□□ -1.69
NEDD1Q8NHV4 AC012442.3-202ENST00000636742 206 ntBASIC4.51□□□□□ -1.69
NEDD1Q8NHV4 AC134026.1-201ENST00000623249 2239 ntBASIC4.51□□□□□ -1.69
NEDD1Q8NHV4 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms