Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.93□□□□□ -1.94
USP38Q8NB14 AL359672.1-201ENST00000442302 409 ntBASIC2.93□□□□□ -1.94
USP38Q8NB14 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.93□□□□□ -1.94
USP38Q8NB14 HMGN2P23-201ENST00000456759 269 ntBASIC2.93□□□□□ -1.94
USP38Q8NB14 SNRPGP7-201ENST00000469016 106 ntBASIC2.93□□□□□ -1.94
USP38Q8NB14 AC090525.1-201ENST00000479116 478 ntBASIC2.93□□□□□ -1.94
USP38Q8NB14 PRDX4P1-201ENST00000507189 574 ntBASIC2.93□□□□□ -1.94
USP38Q8NB14 SCARNA11.3-201ENST00000517276 130 ntBASIC2.93□□□□□ -1.94
USP38Q8NB14 AC107953.1-201ENST00000522216 297 ntBASIC2.93□□□□□ -1.94
USP38Q8NB14 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.93□□□□□ -1.94
USP38Q8NB14 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.93□□□□□ -1.94
USP38Q8NB14 MIR3199-1-201ENST00000582434 88 ntBASIC2.93□□□□□ -1.94
USP38Q8NB14 AC011712.1-201ENST00000588959 234 ntBASIC2.93□□□□□ -1.94
USP38Q8NB14 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
USP38Q8NB14 CTSLP2-204ENST00000629029 392 ntBASIC2.93□□□□□ -1.94
USP38Q8NB14 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
USP38Q8NB14 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
USP38Q8NB14 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
USP38Q8NB14 RNU6-1148P-201ENST00000410992 104 ntBASIC2.92□□□□□ -1.94
USP38Q8NB14 VN1R36P-201ENST00000414936 291 ntBASIC2.92□□□□□ -1.94
USP38Q8NB14 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
USP38Q8NB14 RBMX2P4-201ENST00000441256 376 ntBASIC2.92□□□□□ -1.94
USP38Q8NB14 RPL30P12-201ENST00000474666 353 ntBASIC2.92□□□□□ -1.94
USP38Q8NB14 RNU5B-3P-201ENST00000516601 115 ntBASIC2.92□□□□□ -1.94
USP38Q8NB14 SNORA31.23-201ENST00000517219 133 ntBASIC2.92□□□□□ -1.94
USP38Q8NB14 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.92□□□□□ -1.94
USP38Q8NB14 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.92□□□□□ -1.94
USP38Q8NB14 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.92□□□□□ -1.94
USP38Q8NB14 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.92□□□□□ -1.94
USP38Q8NB14 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
USP38Q8NB14 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.92□□□□□ -1.94
USP38Q8NB14 AP000787.2-201ENST00000604432 568 ntBASIC2.92□□□□□ -1.94
USP38Q8NB14 ELOCP5-201ENST00000604924 333 ntBASIC2.92□□□□□ -1.94
USP38Q8NB14 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.92□□□□□ -1.94
USP38Q8NB14 AC064836.2-201ENST00000609491 462 ntBASIC2.92□□□□□ -1.94
USP38Q8NB14 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
USP38Q8NB14 MTND5P30-201ENST00000452896 1731 ntBASIC2.92□□□□□ -1.94
USP38Q8NB14 AL109809.4-201ENST00000603520 2185 ntBASIC2.92□□□□□ -1.94
USP38Q8NB14 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
USP38Q8NB14 Z75746.1-201ENST00000440243 2080 ntBASIC2.91□□□□□ -1.94
USP38Q8NB14 AP006437.1-201ENST00000641440 3685 ntBASIC2.91□□□□□ -1.94
USP38Q8NB14 SNORA68.1-201ENST00000364537 132 ntBASIC2.91□□□□□ -1.94
USP38Q8NB14 RNU6-336P-201ENST00000364891 107 ntBASIC2.91□□□□□ -1.94
USP38Q8NB14 MT-TL1-201ENST00000386347 75 ntBASIC2.91□□□□□ -1.94
USP38Q8NB14 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.91□□□□□ -1.94
USP38Q8NB14 AC124916.1-201ENST00000444020 547 ntBASIC2.91□□□□□ -1.94
USP38Q8NB14 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.91□□□□□ -1.94
USP38Q8NB14 RPL7P43-201ENST00000478876 753 ntBASIC2.91□□□□□ -1.94
USP38Q8NB14 RPL22P13-201ENST00000493291 347 ntBASIC2.91□□□□□ -1.94
USP38Q8NB14 RNU4-49P-201ENST00000516080 140 ntBASIC2.91□□□□□ -1.94
USP38Q8NB14 RN7SKP256-201ENST00000517201 314 ntBASIC2.91□□□□□ -1.94
USP38Q8NB14 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.91□□□□□ -1.94
USP38Q8NB14 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.91□□□□□ -1.94
USP38Q8NB14 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.91□□□□□ -1.94
USP38Q8NB14 AC026371.1-201ENST00000551867 419 ntBASIC2.91□□□□□ -1.94
USP38Q8NB14 AC105137.2-201ENST00000569073 466 ntBASIC2.91□□□□□ -1.94
USP38Q8NB14 RPS15AP11-201ENST00000594193 385 ntBASIC2.91□□□□□ -1.94
USP38Q8NB14 AC096772.1-201ENST00000609146 564 ntBASIC2.91□□□□□ -1.94
USP38Q8NB14 FAM157A-202ENST00000615155 405 ntBASIC2.91□□□□□ -1.94
USP38Q8NB14 AC009248.2-201ENST00000619826 254 ntBASIC2.91□□□□□ -1.94
USP38Q8NB14 AC138627.2-201ENST00000624202 601 ntBASIC2.91□□□□□ -1.94
USP38Q8NB14 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
USP38Q8NB14 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
USP38Q8NB14 CBX3P1-201ENST00000325243 554 ntBASIC2.9□□□□□ -1.95
USP38Q8NB14 SNORD114-19-201ENST00000363072 75 ntBASIC2.9□□□□□ -1.95
USP38Q8NB14 RNU6-105P-201ENST00000363909 104 ntBASIC2.9□□□□□ -1.95
USP38Q8NB14 RNU6-1283P-201ENST00000365314 105 ntBASIC2.9□□□□□ -1.95
USP38Q8NB14 RNU6-831P-201ENST00000384548 107 ntBASIC2.9□□□□□ -1.95
USP38Q8NB14 MIR544A-201ENST00000384855 91 ntBASIC2.9□□□□□ -1.95
USP38Q8NB14 RNU6-1328P-201ENST00000410938 106 ntBASIC2.9□□□□□ -1.95
USP38Q8NB14 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.9□□□□□ -1.95
USP38Q8NB14 AL117339.3-201ENST00000418733 162 ntBASIC2.9□□□□□ -1.95
USP38Q8NB14 RPS15AP10-201ENST00000432472 382 ntBASIC2.9□□□□□ -1.95
USP38Q8NB14 MTCO3P18-201ENST00000440206 761 ntBASIC2.9□□□□□ -1.95
USP38Q8NB14 MTND4LP16-201ENST00000440828 295 ntBASIC2.9□□□□□ -1.95
USP38Q8NB14 RNU7-66P-201ENST00000459469 62 ntBASIC2.9□□□□□ -1.95
USP38Q8NB14 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.9□□□□□ -1.95
USP38Q8NB14 AC092436.3-201ENST00000511788 257 ntBASIC2.9□□□□□ -1.95
USP38Q8NB14 RPL39P5-202ENST00000512505 151 ntBASIC2.9□□□□□ -1.95
USP38Q8NB14 RNU6-256P-201ENST00000516747 97 ntBASIC2.9□□□□□ -1.95
USP38Q8NB14 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.9□□□□□ -1.95
USP38Q8NB14 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.9□□□□□ -1.95
USP38Q8NB14 AP001094.1-201ENST00000579805 193 ntBASIC2.9□□□□□ -1.95
USP38Q8NB14 MIR3942-201ENST00000585264 109 ntBASIC2.9□□□□□ -1.95
USP38Q8NB14 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.9□□□□□ -1.95
USP38Q8NB14 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.9□□□□□ -1.95
USP38Q8NB14 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
USP38Q8NB14 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
USP38Q8NB14 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
USP38Q8NB14 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
USP38Q8NB14 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
USP38Q8NB14 RNU6-1329P-201ENST00000365664 107 ntBASIC2.89□□□□□ -1.95
USP38Q8NB14 MIR27B-201ENST00000385129 97 ntBASIC2.89□□□□□ -1.95
USP38Q8NB14 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.89□□□□□ -1.95
USP38Q8NB14 AC097463.2-201ENST00000421074 142 ntBASIC2.89□□□□□ -1.95
USP38Q8NB14 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.89□□□□□ -1.95
USP38Q8NB14 SUMO1P4-201ENST00000429430 302 ntBASIC2.89□□□□□ -1.95
USP38Q8NB14 AC092427.1-202ENST00000430569 476 ntBASIC2.89□□□□□ -1.95
USP38Q8NB14 RPS15AP7-201ENST00000439294 405 ntBASIC2.89□□□□□ -1.95
USP38Q8NB14 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms