Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 RNU6-189P-201ENST00000516120 101 ntBASIC1.93□□□□□ -2.1
C9orf40Q8IXQ3 RNU2-53P-201ENST00000516257 147 ntBASIC1.93□□□□□ -2.1
C9orf40Q8IXQ3 FO082796.1-201ENST00000523795 183 ntBASIC1.93□□□□□ -2.1
C9orf40Q8IXQ3 CYCSP27-201ENST00000527643 293 ntBASIC1.93□□□□□ -2.1
C9orf40Q8IXQ3 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.93□□□□□ -2.1
C9orf40Q8IXQ3 AC016957.1-201ENST00000534895 309 ntBASIC1.93□□□□□ -2.1
C9orf40Q8IXQ3 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.93□□□□□ -2.1
C9orf40Q8IXQ3 AL162413.1-201ENST00000603198 110 ntBASIC1.93□□□□□ -2.1
C9orf40Q8IXQ3 AL138963.2-201ENST00000605137 226 ntBASIC1.93□□□□□ -2.1
C9orf40Q8IXQ3 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.93□□□□□ -2.1
C9orf40Q8IXQ3 AC009233.1-201ENST00000616477 371 ntBASIC1.93□□□□□ -2.1
C9orf40Q8IXQ3 MIR5739-201ENST00000619803 80 ntBASIC1.93□□□□□ -2.1
C9orf40Q8IXQ3 YWHAEP7-203ENST00000622054 312 ntBASIC1.93□□□□□ -2.1
C9orf40Q8IXQ3 AC007792.1-201ENST00000623023 402 ntBASIC1.93□□□□□ -2.1
C9orf40Q8IXQ3 MIR219B-201ENST00000637023 88 ntBASIC1.93□□□□□ -2.1
C9orf40Q8IXQ3 AP000553.5-201ENST00000641933 54 ntBASIC1.93□□□□□ -2.1
C9orf40Q8IXQ3 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
C9orf40Q8IXQ3 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
C9orf40Q8IXQ3 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.92□□□□□ -2.1
C9orf40Q8IXQ3 RNU6-212P-201ENST00000362642 104 ntBASIC1.92□□□□□ -2.1
C9orf40Q8IXQ3 RNU6-529P-201ENST00000363383 104 ntBASIC1.92□□□□□ -2.1
C9orf40Q8IXQ3 RNU6-82P-201ENST00000363970 107 ntBASIC1.92□□□□□ -2.1
C9orf40Q8IXQ3 AL079342.1-201ENST00000401460 267 ntBASIC1.92□□□□□ -2.1
C9orf40Q8IXQ3 RNU6-1068P-201ENST00000410958 103 ntBASIC1.92□□□□□ -2.1
C9orf40Q8IXQ3 POLHP1-201ENST00000411806 470 ntBASIC1.92□□□□□ -2.1
C9orf40Q8IXQ3 AL139156.1-201ENST00000412785 841 ntBASIC1.92□□□□□ -2.1
C9orf40Q8IXQ3 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.92□□□□□ -2.1
C9orf40Q8IXQ3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.92□□□□□ -2.1
C9orf40Q8IXQ3 AC007969.2-201ENST00000441891 191 ntBASIC1.92□□□□□ -2.1
C9orf40Q8IXQ3 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.92□□□□□ -2.1
C9orf40Q8IXQ3 AL031274.1-201ENST00000450334 232 ntBASIC1.92□□□□□ -2.1
C9orf40Q8IXQ3 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.92□□□□□ -2.1
C9orf40Q8IXQ3 AC117503.1-201ENST00000472241 394 ntBASIC1.92□□□□□ -2.1
C9orf40Q8IXQ3 RPL21P99-201ENST00000480369 423 ntBASIC1.92□□□□□ -2.1
C9orf40Q8IXQ3 AC091885.1-201ENST00000506658 268 ntBASIC1.92□□□□□ -2.1
C9orf40Q8IXQ3 AF213884.2-201ENST00000510417 903 ntBASIC1.92□□□□□ -2.1
C9orf40Q8IXQ3 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.92□□□□□ -2.1
C9orf40Q8IXQ3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.92□□□□□ -2.1
C9orf40Q8IXQ3 SNORA14.1-201ENST00000516113 141 ntBASIC1.92□□□□□ -2.1
C9orf40Q8IXQ3 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.92□□□□□ -2.1
C9orf40Q8IXQ3 AL118558.2-201ENST00000556294 238 ntBASIC1.92□□□□□ -2.1
C9orf40Q8IXQ3 AL133241.1-201ENST00000556832 487 ntBASIC1.92□□□□□ -2.1
C9orf40Q8IXQ3 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.92□□□□□ -2.1
C9orf40Q8IXQ3 RPL30P11-203ENST00000598995 310 ntBASIC1.92□□□□□ -2.1
C9orf40Q8IXQ3 AL713866.2-201ENST00000603579 219 ntBASIC1.92□□□□□ -2.1
C9orf40Q8IXQ3 AC092747.3-201ENST00000603769 301 ntBASIC1.92□□□□□ -2.1
C9orf40Q8IXQ3 RNU6-85P-201ENST00000605989 107 ntBASIC1.92□□□□□ -2.1
C9orf40Q8IXQ3 AC004492.1-201ENST00000607036 742 ntBASIC1.92□□□□□ -2.1
C9orf40Q8IXQ3 AC139792.2-201ENST00000624218 587 ntBASIC1.92□□□□□ -2.1
C9orf40Q8IXQ3 AC068137.4-201ENST00000638485 296 ntBASIC1.92□□□□□ -2.1
C9orf40Q8IXQ3 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.92□□□□□ -2.1
C9orf40Q8IXQ3 AC002543.1-201ENST00000299783 1954 ntBASIC1.92□□□□□ -2.1
C9orf40Q8IXQ3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
C9orf40Q8IXQ3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
C9orf40Q8IXQ3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
C9orf40Q8IXQ3 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
C9orf40Q8IXQ3 RNU6-428P-201ENST00000362942 107 ntBASIC1.91□□□□□ -2.1
C9orf40Q8IXQ3 RNU6-336P-201ENST00000364891 107 ntBASIC1.91□□□□□ -2.1
C9orf40Q8IXQ3 Y_RNA.378-201ENST00000365652 113 ntBASIC1.91□□□□□ -2.1
C9orf40Q8IXQ3 MIR544A-201ENST00000384855 91 ntBASIC1.91□□□□□ -2.1
C9orf40Q8IXQ3 MIR181A1-201ENST00000385026 110 ntBASIC1.91□□□□□ -2.1
C9orf40Q8IXQ3 RNU2-63P-201ENST00000410792 194 ntBASIC1.91□□□□□ -2.1
C9orf40Q8IXQ3 RNU6-1245P-201ENST00000411130 106 ntBASIC1.91□□□□□ -2.1
C9orf40Q8IXQ3 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.91□□□□□ -2.1
C9orf40Q8IXQ3 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.91□□□□□ -2.1
C9orf40Q8IXQ3 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.91□□□□□ -2.1
C9orf40Q8IXQ3 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.91□□□□□ -2.1
C9orf40Q8IXQ3 SNORD60.2-201ENST00000516883 86 ntBASIC1.91□□□□□ -2.1
C9orf40Q8IXQ3 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.91□□□□□ -2.1
C9orf40Q8IXQ3 IGKV3-31-201ENST00000523109 329 ntBASIC1.91□□□□□ -2.1
C9orf40Q8IXQ3 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.91□□□□□ -2.1
C9orf40Q8IXQ3 COPS8P3-201ENST00000526024 482 ntBASIC1.91□□□□□ -2.1
C9orf40Q8IXQ3 CBX3P7-201ENST00000532876 502 ntBASIC1.91□□□□□ -2.1
C9orf40Q8IXQ3 AL157687.1-201ENST00000554853 619 ntBASIC1.91□□□□□ -2.1
C9orf40Q8IXQ3 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.91□□□□□ -2.1
C9orf40Q8IXQ3 MIR6840-201ENST00000611937 71 ntBASIC1.91□□□□□ -2.1
C9orf40Q8IXQ3 AC103705.1-201ENST00000619013 241 ntBASIC1.91□□□□□ -2.1
C9orf40Q8IXQ3 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.91□□□□□ -2.1
C9orf40Q8IXQ3 AC068137.3-201ENST00000639191 341 ntBASIC1.91□□□□□ -2.1
C9orf40Q8IXQ3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
C9orf40Q8IXQ3 Z82209.1-201ENST00000422141 2135 ntBASIC1.9□□□□□ -2.1
C9orf40Q8IXQ3 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 AL596028.1-201ENST00000326971 197 ntBASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 Y_RNA.40-201ENST00000362645 93 ntBASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 RNU6-655P-201ENST00000362858 107 ntBASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 RNA5SP240-201ENST00000365355 128 ntBASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 MIR514A2-201ENST00000385131 88 ntBASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 MIR514A3-201ENST00000385132 88 ntBASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 RNU6-908P-201ENST00000410160 94 ntBASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 RNU4-26P-201ENST00000410270 107 ntBASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 RNU2-2P-201ENST00000410396 191 ntBASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 RNU2-40P-201ENST00000410833 196 ntBASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 RNU6-293P-201ENST00000411259 106 ntBASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 AL117339.3-201ENST00000418733 162 ntBASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 ARL5AP1-201ENST00000418991 388 ntBASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 AL445646.1-201ENST00000431784 216 ntBASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 AL161788.1-201ENST00000441805 169 ntBASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 RPL39P29-201ENST00000447779 157 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms