Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ZNF826P-207ENST00000622273 1910 ntBASIC3.55□□□□□ -1.84
TRIM48Q8IWZ4 SNORD113-8-201ENST00000363497 74 ntBASIC3.55□□□□□ -1.84
TRIM48Q8IWZ4 SNORD115-32-201ENST00000364079 82 ntBASIC3.55□□□□□ -1.84
TRIM48Q8IWZ4 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
TRIM48Q8IWZ4 RNU6-142P-201ENST00000384019 107 ntBASIC3.55□□□□□ -1.84
TRIM48Q8IWZ4 RNU6-102P-201ENST00000384485 104 ntBASIC3.55□□□□□ -1.84
TRIM48Q8IWZ4 RNU6-541P-201ENST00000384709 110 ntBASIC3.55□□□□□ -1.84
TRIM48Q8IWZ4 RPS4XP3-201ENST00000398541 413 ntBASIC3.55□□□□□ -1.84
TRIM48Q8IWZ4 HSPE1P26-201ENST00000405341 275 ntBASIC3.55□□□□□ -1.84
TRIM48Q8IWZ4 AL603910.2-201ENST00000407268 136 ntBASIC3.55□□□□□ -1.84
TRIM48Q8IWZ4 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.55□□□□□ -1.84
TRIM48Q8IWZ4 RPS15AP7-201ENST00000439294 405 ntBASIC3.55□□□□□ -1.84
TRIM48Q8IWZ4 snoU13.6-201ENST00000458785 104 ntBASIC3.55□□□□□ -1.84
TRIM48Q8IWZ4 AC106707.2-201ENST00000484182 374 ntBASIC3.55□□□□□ -1.84
TRIM48Q8IWZ4 AP001025.1-201ENST00000486139 332 ntBASIC3.55□□□□□ -1.84
TRIM48Q8IWZ4 RNU6-1338P-201ENST00000516328 91 ntBASIC3.55□□□□□ -1.84
TRIM48Q8IWZ4 AC006199.1-201ENST00000548728 219 ntBASIC3.55□□□□□ -1.84
TRIM48Q8IWZ4 NACAP3-201ENST00000552100 481 ntBASIC3.55□□□□□ -1.84
TRIM48Q8IWZ4 MIR5695-201ENST00000579717 85 ntBASIC3.55□□□□□ -1.84
TRIM48Q8IWZ4 MIR4444-1-201ENST00000581696 74 ntBASIC3.55□□□□□ -1.84
TRIM48Q8IWZ4 MIR4444-2-201ENST00000584390 74 ntBASIC3.55□□□□□ -1.84
TRIM48Q8IWZ4 AC019176.2-201ENST00000611579 315 ntBASIC3.55□□□□□ -1.84
TRIM48Q8IWZ4 AC084757.4-201ENST00000616350 526 ntBASIC3.55□□□□□ -1.84
TRIM48Q8IWZ4 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM48Q8IWZ4 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM48Q8IWZ4 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM48Q8IWZ4 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM48Q8IWZ4 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM48Q8IWZ4 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM48Q8IWZ4 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM48Q8IWZ4 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.54□□□□□ -1.84
TRIM48Q8IWZ4 AC007656.2-201ENST00000624902 4547 ntBASIC3.54□□□□□ -1.84
TRIM48Q8IWZ4 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM48Q8IWZ4 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM48Q8IWZ4 Y_RNA.20-201ENST00000362479 113 ntBASIC3.54□□□□□ -1.84
TRIM48Q8IWZ4 Y_RNA.65-201ENST00000362846 100 ntBASIC3.54□□□□□ -1.84
TRIM48Q8IWZ4 Y_RNA.277-201ENST00000364754 102 ntBASIC3.54□□□□□ -1.84
TRIM48Q8IWZ4 MIR548H3-201ENST00000408771 118 ntBASIC3.54□□□□□ -1.84
TRIM48Q8IWZ4 AL590135.1-201ENST00000422215 156 ntBASIC3.54□□□□□ -1.84
TRIM48Q8IWZ4 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.54□□□□□ -1.84
TRIM48Q8IWZ4 AC012308.1-201ENST00000451232 178 ntBASIC3.54□□□□□ -1.84
TRIM48Q8IWZ4 RNU6-138P-201ENST00000515952 107 ntBASIC3.54□□□□□ -1.84
TRIM48Q8IWZ4 ACA59.2-201ENST00000517061 156 ntBASIC3.54□□□□□ -1.84
TRIM48Q8IWZ4 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.54□□□□□ -1.84
TRIM48Q8IWZ4 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM48Q8IWZ4 MIR3944-201ENST00000581277 108 ntBASIC3.54□□□□□ -1.84
TRIM48Q8IWZ4 MIR3609-201ENST00000582661 80 ntBASIC3.54□□□□□ -1.84
TRIM48Q8IWZ4 MIR7851-201ENST00000610611 160 ntBASIC3.54□□□□□ -1.84
TRIM48Q8IWZ4 AC005296.1-201ENST00000616145 209 ntBASIC3.54□□□□□ -1.84
TRIM48Q8IWZ4 AC012314.7-201ENST00000619693 93 ntBASIC3.54□□□□□ -1.84
TRIM48Q8IWZ4 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.54□□□□□ -1.84
TRIM48Q8IWZ4 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.54□□□□□ -1.84
TRIM48Q8IWZ4 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM48Q8IWZ4 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM48Q8IWZ4 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM48Q8IWZ4 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
TRIM48Q8IWZ4 AC110491.1-201ENST00000562191 2010 ntBASIC3.53□□□□□ -1.84
TRIM48Q8IWZ4 MIR335-201ENST00000362173 94 ntBASIC3.53□□□□□ -1.84
TRIM48Q8IWZ4 SNORD9-201ENST00000362566 104 ntBASIC3.53□□□□□ -1.84
TRIM48Q8IWZ4 SNORA71.3-201ENST00000362582 128 ntBASIC3.53□□□□□ -1.84
TRIM48Q8IWZ4 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM48Q8IWZ4 U8.10-201ENST00000384260 133 ntBASIC3.53□□□□□ -1.84
TRIM48Q8IWZ4 RNA5SP213-201ENST00000391031 106 ntBASIC3.53□□□□□ -1.84
TRIM48Q8IWZ4 MRPL35P1-201ENST00000404272 572 ntBASIC3.53□□□□□ -1.84
TRIM48Q8IWZ4 MTHFD2P2-201ENST00000407725 247 ntBASIC3.53□□□□□ -1.84
TRIM48Q8IWZ4 SNORD12B-201ENST00000410433 91 ntBASIC3.53□□□□□ -1.84
TRIM48Q8IWZ4 RNU2-14P-201ENST00000411053 191 ntBASIC3.53□□□□□ -1.84
TRIM48Q8IWZ4 RNU2-64P-201ENST00000411315 191 ntBASIC3.53□□□□□ -1.84
TRIM48Q8IWZ4 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.53□□□□□ -1.84
TRIM48Q8IWZ4 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.53□□□□□ -1.84
TRIM48Q8IWZ4 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.53□□□□□ -1.84
TRIM48Q8IWZ4 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.53□□□□□ -1.84
TRIM48Q8IWZ4 RNU6-1114P-201ENST00000516022 107 ntBASIC3.53□□□□□ -1.84
TRIM48Q8IWZ4 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.53□□□□□ -1.84
TRIM48Q8IWZ4 AC027288.2-201ENST00000553028 243 ntBASIC3.53□□□□□ -1.84
TRIM48Q8IWZ4 AL359198.2-201ENST00000611836 194 ntBASIC3.53□□□□□ -1.84
TRIM48Q8IWZ4 MIR3199-2-201ENST00000636243 86 ntBASIC3.53□□□□□ -1.84
TRIM48Q8IWZ4 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.53□□□□□ -1.84
TRIM48Q8IWZ4 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM48Q8IWZ4 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.53□□□□□ -1.84
TRIM48Q8IWZ4 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM48Q8IWZ4 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
TRIM48Q8IWZ4 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.52□□□□□ -1.85
TRIM48Q8IWZ4 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.52□□□□□ -1.85
TRIM48Q8IWZ4 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
TRIM48Q8IWZ4 RBBP8P1-201ENST00000449447 1844 ntBASIC3.52□□□□□ -1.85
TRIM48Q8IWZ4 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TRIM48Q8IWZ4 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.52□□□□□ -1.85
TRIM48Q8IWZ4 Y_RNA.319-201ENST00000365138 92 ntBASIC3.52□□□□□ -1.85
TRIM48Q8IWZ4 RNU6-209P-201ENST00000384118 107 ntBASIC3.52□□□□□ -1.85
TRIM48Q8IWZ4 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
TRIM48Q8IWZ4 RNU1-139P-201ENST00000391307 165 ntBASIC3.52□□□□□ -1.85
TRIM48Q8IWZ4 RNU6-1140P-201ENST00000410517 106 ntBASIC3.52□□□□□ -1.85
TRIM48Q8IWZ4 RNU2-37P-201ENST00000410695 177 ntBASIC3.52□□□□□ -1.85
TRIM48Q8IWZ4 RN7SKP53-201ENST00000411337 315 ntBASIC3.52□□□□□ -1.85
TRIM48Q8IWZ4 RPL39P29-201ENST00000447779 157 ntBASIC3.52□□□□□ -1.85
TRIM48Q8IWZ4 PRSS3P4-201ENST00000453323 162 ntBASIC3.52□□□□□ -1.85
TRIM48Q8IWZ4 CEACAMP4-201ENST00000457676 421 ntBASIC3.52□□□□□ -1.85
TRIM48Q8IWZ4 RPL7P49-201ENST00000471402 708 ntBASIC3.52□□□□□ -1.85
TRIM48Q8IWZ4 AC110768.1-201ENST00000509222 400 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms