Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC4.64□□□□□ -1.67
RNF135Q8IUD6 RN7SL703P-201ENST00000578485 302 ntBASIC4.64□□□□□ -1.67
RNF135Q8IUD6 uc_338.13-201ENST00000618243 179 ntBASIC4.64□□□□□ -1.67
RNF135Q8IUD6 AC008873.1-201ENST00000625051 138 ntBASIC4.64□□□□□ -1.67
RNF135Q8IUD6 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
RNF135Q8IUD6 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RNF135Q8IUD6 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
RNF135Q8IUD6 AC002543.1-201ENST00000299783 1954 ntBASIC4.64□□□□□ -1.67
RNF135Q8IUD6 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RNF135Q8IUD6 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
RNF135Q8IUD6 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.63□□□□□ -1.67
RNF135Q8IUD6 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RNF135Q8IUD6 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.63□□□□□ -1.67
RNF135Q8IUD6 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
RNF135Q8IUD6 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
RNF135Q8IUD6 PTMAP5-201ENST00000393073 333 ntBASIC4.63□□□□□ -1.67
RNF135Q8IUD6 EI24P2-201ENST00000397776 1076 ntBASIC4.63□□□□□ -1.67
RNF135Q8IUD6 AL160275.2-201ENST00000412010 394 ntBASIC4.63□□□□□ -1.67
RNF135Q8IUD6 RPL30P13-201ENST00000418873 348 ntBASIC4.63□□□□□ -1.67
RNF135Q8IUD6 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.63□□□□□ -1.67
RNF135Q8IUD6 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RNF135Q8IUD6 SNRPGP5-201ENST00000456003 220 ntBASIC4.63□□□□□ -1.67
RNF135Q8IUD6 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.63□□□□□ -1.67
RNF135Q8IUD6 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.63□□□□□ -1.67
RNF135Q8IUD6 CYP4A27P-201ENST00000567218 190 ntBASIC4.63□□□□□ -1.67
RNF135Q8IUD6 AL008718.3-201ENST00000610217 321 ntBASIC4.63□□□□□ -1.67
RNF135Q8IUD6 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4.63□□□□□ -1.67
RNF135Q8IUD6 SNORD98-201ENST00000636377 67 ntBASIC4.63□□□□□ -1.67
RNF135Q8IUD6 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.63□□□□□ -1.67
RNF135Q8IUD6 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RNF135Q8IUD6 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.63□□□□□ -1.67
RNF135Q8IUD6 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
RNF135Q8IUD6 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
RNF135Q8IUD6 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
RNF135Q8IUD6 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.62□□□□□ -1.67
RNF135Q8IUD6 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.62□□□□□ -1.67
RNF135Q8IUD6 RNU4-17P-201ENST00000365598 141 ntBASIC4.62□□□□□ -1.67
RNF135Q8IUD6 MIR539-201ENST00000365690 78 ntBASIC4.62□□□□□ -1.67
RNF135Q8IUD6 SNORA9-201ENST00000384215 133 ntBASIC4.62□□□□□ -1.67
RNF135Q8IUD6 SNORA20-201ENST00000384662 132 ntBASIC4.62□□□□□ -1.67
RNF135Q8IUD6 RNU6-1248P-201ENST00000391096 64 ntBASIC4.62□□□□□ -1.67
RNF135Q8IUD6 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RNF135Q8IUD6 RNU2-54P-201ENST00000410299 190 ntBASIC4.62□□□□□ -1.67
RNF135Q8IUD6 RN7SKP53-201ENST00000411337 315 ntBASIC4.62□□□□□ -1.67
RNF135Q8IUD6 PTGES3P4-201ENST00000426243 356 ntBASIC4.62□□□□□ -1.67
RNF135Q8IUD6 BTF3P11-201ENST00000426582 477 ntBASIC4.62□□□□□ -1.67
RNF135Q8IUD6 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.62□□□□□ -1.67
RNF135Q8IUD6 RPS15AP5-201ENST00000436276 388 ntBASIC4.62□□□□□ -1.67
RNF135Q8IUD6 AL133547.1-201ENST00000448546 220 ntBASIC4.62□□□□□ -1.67
RNF135Q8IUD6 CYCTP-201ENST00000504253 315 ntBASIC4.62□□□□□ -1.67
RNF135Q8IUD6 TVP23BP1-201ENST00000557500 617 ntBASIC4.62□□□□□ -1.67
RNF135Q8IUD6 MIR3136-201ENST00000583498 78 ntBASIC4.62□□□□□ -1.67
RNF135Q8IUD6 DEFB117-201ENST00000602356 141 ntBASIC4.62□□□□□ -1.67
RNF135Q8IUD6 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.62□□□□□ -1.67
RNF135Q8IUD6 MIR3199-2-201ENST00000636243 86 ntBASIC4.62□□□□□ -1.67
RNF135Q8IUD6 AC012442.3-202ENST00000636742 206 ntBASIC4.62□□□□□ -1.67
RNF135Q8IUD6 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.62□□□□□ -1.67
RNF135Q8IUD6 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RNF135Q8IUD6 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RNF135Q8IUD6 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.62□□□□□ -1.67
RNF135Q8IUD6 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.62□□□□□ -1.67
RNF135Q8IUD6 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.61□□□□□ -1.67
RNF135Q8IUD6 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.61□□□□□ -1.67
RNF135Q8IUD6 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RNF135Q8IUD6 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.61□□□□□ -1.67
RNF135Q8IUD6 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.61□□□□□ -1.67
RNF135Q8IUD6 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RNF135Q8IUD6 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.61□□□□□ -1.67
RNF135Q8IUD6 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
RNF135Q8IUD6 RNU4-11P-201ENST00000365287 132 ntBASIC4.61□□□□□ -1.67
RNF135Q8IUD6 RNU6-1056P-201ENST00000383996 107 ntBASIC4.61□□□□□ -1.67
RNF135Q8IUD6 MIR7-3-201ENST00000384898 110 ntBASIC4.61□□□□□ -1.67
RNF135Q8IUD6 U3.26-201ENST00000391236 204 ntBASIC4.61□□□□□ -1.67
RNF135Q8IUD6 MIR208B-201ENST00000401172 77 ntBASIC4.61□□□□□ -1.67
RNF135Q8IUD6 RPL23AP48-201ENST00000406913 488 ntBASIC4.61□□□□□ -1.67
RNF135Q8IUD6 MIR320B2-201ENST00000408479 138 ntBASIC4.61□□□□□ -1.67
RNF135Q8IUD6 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF135Q8IUD6 AC093578.1-201ENST00000415219 368 ntBASIC4.61□□□□□ -1.67
RNF135Q8IUD6 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC4.61□□□□□ -1.67
RNF135Q8IUD6 RNU1-61P-201ENST00000516107 151 ntBASIC4.61□□□□□ -1.67
RNF135Q8IUD6 RNU7-121P-201ENST00000516604 62 ntBASIC4.61□□□□□ -1.67
RNF135Q8IUD6 HIGD1AP1-201ENST00000550979 275 ntBASIC4.61□□□□□ -1.67
RNF135Q8IUD6 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.61□□□□□ -1.67
RNF135Q8IUD6 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RNF135Q8IUD6 AC005086.4-201ENST00000623065 213 ntBASIC4.61□□□□□ -1.67
RNF135Q8IUD6 AC140479.6-201ENST00000633535 357 ntBASIC4.61□□□□□ -1.67
RNF135Q8IUD6 MIR3674-201ENST00000636576 68 ntBASIC4.61□□□□□ -1.67
RNF135Q8IUD6 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.61□□□□□ -1.67
RNF135Q8IUD6 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
RNF135Q8IUD6 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
RNF135Q8IUD6 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.61□□□□□ -1.67
RNF135Q8IUD6 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.61□□□□□ -1.67
RNF135Q8IUD6 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RNF135Q8IUD6 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RNF135Q8IUD6 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.61□□□□□ -1.67
RNF135Q8IUD6 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.61□□□□□ -1.67
RNF135Q8IUD6 AL133383.2-201ENST00000622958 2336 ntBASIC4.61□□□□□ -1.67
RNF135Q8IUD6 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
RNF135Q8IUD6 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
RNF135Q8IUD6 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms