Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AC007496.3-201ENST00000624987 3443 ntBASIC4.54□□□□□ -1.68
TRIM50Q86XT4 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM50Q86XT4 AL359854.1-201ENST00000614203 1594 ntBASIC4.54□□□□□ -1.68
TRIM50Q86XT4 AC073073.2-201ENST00000609827 2578 ntBASIC4.54□□□□□ -1.68
TRIM50Q86XT4 RNU6-799P-201ENST00000363567 107 ntBASIC4.54□□□□□ -1.68
TRIM50Q86XT4 Y_RNA.262-201ENST00000364641 102 ntBASIC4.54□□□□□ -1.68
TRIM50Q86XT4 AC004552.1-201ENST00000419089 348 ntBASIC4.54□□□□□ -1.68
TRIM50Q86XT4 AC007215.1-201ENST00000464893 276 ntBASIC4.54□□□□□ -1.68
TRIM50Q86XT4 RPS26P3-201ENST00000470205 348 ntBASIC4.54□□□□□ -1.68
TRIM50Q86XT4 AC090543.2-201ENST00000483963 348 ntBASIC4.54□□□□□ -1.68
TRIM50Q86XT4 AC004057.1-201ENST00000485827 348 ntBASIC4.54□□□□□ -1.68
TRIM50Q86XT4 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM50Q86XT4 RNU7-200P-201ENST00000516105 62 ntBASIC4.54□□□□□ -1.68
TRIM50Q86XT4 RNU6-155P-201ENST00000516347 100 ntBASIC4.54□□□□□ -1.68
TRIM50Q86XT4 AP005660.1-201ENST00000522972 293 ntBASIC4.54□□□□□ -1.68
TRIM50Q86XT4 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM50Q86XT4 MIR3144-201ENST00000579460 79 ntBASIC4.54□□□□□ -1.68
TRIM50Q86XT4 MIR3158-1-201ENST00000583596 81 ntBASIC4.54□□□□□ -1.68
TRIM50Q86XT4 AL162713.1-201ENST00000604480 262 ntBASIC4.54□□□□□ -1.68
TRIM50Q86XT4 HSPE1P7-201ENST00000604681 321 ntBASIC4.54□□□□□ -1.68
TRIM50Q86XT4 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.54□□□□□ -1.68
TRIM50Q86XT4 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
TRIM50Q86XT4 AL133412.1-201ENST00000380194 2992 ntBASIC4.54□□□□□ -1.68
TRIM50Q86XT4 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM50Q86XT4 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
TRIM50Q86XT4 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.54□□□□□ -1.68
TRIM50Q86XT4 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM50Q86XT4 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM50Q86XT4 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
TRIM50Q86XT4 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM50Q86XT4 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.53□□□□□ -1.68
TRIM50Q86XT4 AC002543.1-201ENST00000299783 1954 ntBASIC4.53□□□□□ -1.68
TRIM50Q86XT4 RNU4-56P-201ENST00000364700 142 ntBASIC4.53□□□□□ -1.68
TRIM50Q86XT4 Y_RNA.304-201ENST00000365011 112 ntBASIC4.53□□□□□ -1.68
TRIM50Q86XT4 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
TRIM50Q86XT4 PTMAP5-201ENST00000393073 333 ntBASIC4.53□□□□□ -1.68
TRIM50Q86XT4 RPL23AP82-202ENST00000427528 469 ntBASIC4.53□□□□□ -1.68
TRIM50Q86XT4 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM50Q86XT4 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM50Q86XT4 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM50Q86XT4 AC107626.1-201ENST00000471084 183 ntBASIC4.53□□□□□ -1.68
TRIM50Q86XT4 AC006517.1-201ENST00000480485 328 ntBASIC4.53□□□□□ -1.68
TRIM50Q86XT4 RPL29P14-201ENST00000495837 428 ntBASIC4.53□□□□□ -1.68
TRIM50Q86XT4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.53□□□□□ -1.68
TRIM50Q86XT4 RNU6-191P-201ENST00000516295 94 ntBASIC4.53□□□□□ -1.68
TRIM50Q86XT4 IGKV2-38-201ENST00000517443 247 ntBASIC4.53□□□□□ -1.68
TRIM50Q86XT4 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM50Q86XT4 CYP4A27P-201ENST00000567218 190 ntBASIC4.53□□□□□ -1.68
TRIM50Q86XT4 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.53□□□□□ -1.68
TRIM50Q86XT4 AC004832.4-201ENST00000608952 331 ntBASIC4.53□□□□□ -1.68
TRIM50Q86XT4 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.53□□□□□ -1.68
TRIM50Q86XT4 snoU18.1-201ENST00000629629 71 ntBASIC4.53□□□□□ -1.68
TRIM50Q86XT4 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
TRIM50Q86XT4 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM50Q86XT4 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM50Q86XT4 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.53□□□□□ -1.68
TRIM50Q86XT4 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.53□□□□□ -1.68
TRIM50Q86XT4 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM50Q86XT4 AL133383.2-201ENST00000622958 2336 ntBASIC4.52□□□□□ -1.69
TRIM50Q86XT4 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
TRIM50Q86XT4 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM50Q86XT4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
TRIM50Q86XT4 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
TRIM50Q86XT4 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.52□□□□□ -1.69
TRIM50Q86XT4 RNU1-15P-201ENST00000353977 144 ntBASIC4.52□□□□□ -1.69
TRIM50Q86XT4 SNORD35B-201ENST00000363660 87 ntBASIC4.52□□□□□ -1.69
TRIM50Q86XT4 Y_RNA.291-201ENST00000364886 113 ntBASIC4.52□□□□□ -1.69
TRIM50Q86XT4 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
TRIM50Q86XT4 RNY1P5-201ENST00000383890 115 ntBASIC4.52□□□□□ -1.69
TRIM50Q86XT4 RNU6-211P-201ENST00000384047 107 ntBASIC4.52□□□□□ -1.69
TRIM50Q86XT4 U3.26-201ENST00000391236 204 ntBASIC4.52□□□□□ -1.69
TRIM50Q86XT4 ELOCP21-201ENST00000412558 336 ntBASIC4.52□□□□□ -1.69
TRIM50Q86XT4 OOSP1P1-201ENST00000423265 274 ntBASIC4.52□□□□□ -1.69
TRIM50Q86XT4 AL591419.1-201ENST00000427423 339 ntBASIC4.52□□□□□ -1.69
TRIM50Q86XT4 IFNA11P-201ENST00000446352 526 ntBASIC4.52□□□□□ -1.69
TRIM50Q86XT4 HMGN2P16-201ENST00000456802 261 ntBASIC4.52□□□□□ -1.69
TRIM50Q86XT4 AIG1P1-201ENST00000503376 148 ntBASIC4.52□□□□□ -1.69
TRIM50Q86XT4 RNU1-61P-201ENST00000516107 151 ntBASIC4.52□□□□□ -1.69
TRIM50Q86XT4 RNU7-143P-201ENST00000516781 65 ntBASIC4.52□□□□□ -1.69
TRIM50Q86XT4 IGLV3-26-201ENST00000520756 302 ntBASIC4.52□□□□□ -1.69
TRIM50Q86XT4 AC105137.2-201ENST00000569073 466 ntBASIC4.52□□□□□ -1.69
TRIM50Q86XT4 AC025627.2-201ENST00000576220 160 ntBASIC4.52□□□□□ -1.69
TRIM50Q86XT4 AL365265.1-201ENST00000621045 234 ntBASIC4.52□□□□□ -1.69
TRIM50Q86XT4 AC039056.2-201ENST00000622261 511 ntBASIC4.52□□□□□ -1.69
TRIM50Q86XT4 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM50Q86XT4 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM50Q86XT4 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM50Q86XT4 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
TRIM50Q86XT4 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.51□□□□□ -1.69
TRIM50Q86XT4 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
TRIM50Q86XT4 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
TRIM50Q86XT4 SNORA60-201ENST00000362396 134 ntBASIC4.51□□□□□ -1.69
TRIM50Q86XT4 Y_RNA.398-201ENST00000383952 99 ntBASIC4.51□□□□□ -1.69
TRIM50Q86XT4 RNU6-245P-201ENST00000384020 107 ntBASIC4.51□□□□□ -1.69
TRIM50Q86XT4 MIR613-201ENST00000385248 95 ntBASIC4.51□□□□□ -1.69
TRIM50Q86XT4 AL591034.1-201ENST00000407447 340 ntBASIC4.51□□□□□ -1.69
TRIM50Q86XT4 RN7SKP53-201ENST00000411337 315 ntBASIC4.51□□□□□ -1.69
TRIM50Q86XT4 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.51□□□□□ -1.69
TRIM50Q86XT4 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.51□□□□□ -1.69
TRIM50Q86XT4 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 230.5 ms