Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RNU6-855P-201ENST00000410395 104 ntBASIC4.4□□□□□ -1.71
LYSMD3Q7Z3D4 SNORA74C-2-201ENST00000411179 201 ntBASIC4.4□□□□□ -1.71
LYSMD3Q7Z3D4 CYCSP49-201ENST00000420810 319 ntBASIC4.4□□□□□ -1.71
LYSMD3Q7Z3D4 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.4□□□□□ -1.71
LYSMD3Q7Z3D4 AC011998.1-201ENST00000433403 117 ntBASIC4.4□□□□□ -1.71
LYSMD3Q7Z3D4 AL714022.1-201ENST00000439897 151 ntBASIC4.4□□□□□ -1.71
LYSMD3Q7Z3D4 RNU7-141P-201ENST00000459304 62 ntBASIC4.4□□□□□ -1.71
LYSMD3Q7Z3D4 AC103975.1-201ENST00000482506 483 ntBASIC4.4□□□□□ -1.71
LYSMD3Q7Z3D4 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.4□□□□□ -1.71
LYSMD3Q7Z3D4 AC009163.5-201ENST00000575421 637 ntBASIC4.4□□□□□ -1.71
LYSMD3Q7Z3D4 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
LYSMD3Q7Z3D4 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LYSMD3Q7Z3D4 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.4□□□□□ -1.71
LYSMD3Q7Z3D4 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
LYSMD3Q7Z3D4 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.4□□□□□ -1.71
LYSMD3Q7Z3D4 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LYSMD3Q7Z3D4 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
LYSMD3Q7Z3D4 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
LYSMD3Q7Z3D4 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LYSMD3Q7Z3D4 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.39□□□□□ -1.71
LYSMD3Q7Z3D4 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LYSMD3Q7Z3D4 MIR331-201ENST00000362302 94 ntBASIC4.39□□□□□ -1.71
LYSMD3Q7Z3D4 Y_RNA.341-201ENST00000365341 102 ntBASIC4.39□□□□□ -1.71
LYSMD3Q7Z3D4 U3.26-201ENST00000391236 204 ntBASIC4.39□□□□□ -1.71
LYSMD3Q7Z3D4 MIR208B-201ENST00000401172 77 ntBASIC4.39□□□□□ -1.71
LYSMD3Q7Z3D4 PHBP16-201ENST00000446318 950 ntBASIC4.39□□□□□ -1.71
LYSMD3Q7Z3D4 RN7SL98P-201ENST00000462271 300 ntBASIC4.39□□□□□ -1.71
LYSMD3Q7Z3D4 RN7SL810P-201ENST00000493031 276 ntBASIC4.39□□□□□ -1.71
LYSMD3Q7Z3D4 PPBPP1-201ENST00000510807 373 ntBASIC4.39□□□□□ -1.71
LYSMD3Q7Z3D4 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.39□□□□□ -1.71
LYSMD3Q7Z3D4 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LYSMD3Q7Z3D4 CYP4A27P-201ENST00000567218 190 ntBASIC4.39□□□□□ -1.71
LYSMD3Q7Z3D4 MIR3121-201ENST00000579680 77 ntBASIC4.39□□□□□ -1.71
LYSMD3Q7Z3D4 MIR6716-201ENST00000613413 80 ntBASIC4.39□□□□□ -1.71
LYSMD3Q7Z3D4 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.39□□□□□ -1.71
LYSMD3Q7Z3D4 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.39□□□□□ -1.71
LYSMD3Q7Z3D4 CENPCP1-201ENST00000533085 2578 ntBASIC4.39□□□□□ -1.71
LYSMD3Q7Z3D4 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LYSMD3Q7Z3D4 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
LYSMD3Q7Z3D4 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
LYSMD3Q7Z3D4 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.38□□□□□ -1.71
LYSMD3Q7Z3D4 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.38□□□□□ -1.71
LYSMD3Q7Z3D4 AC106871.1-201ENST00000568324 3102 ntBASIC4.38□□□□□ -1.71
LYSMD3Q7Z3D4 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LYSMD3Q7Z3D4 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.38□□□□□ -1.71
LYSMD3Q7Z3D4 RNU6-1082P-201ENST00000364574 107 ntBASIC4.38□□□□□ -1.71
LYSMD3Q7Z3D4 RNA5SP509-201ENST00000364577 119 ntBASIC4.38□□□□□ -1.71
LYSMD3Q7Z3D4 Y_RNA.310-201ENST00000365063 113 ntBASIC4.38□□□□□ -1.71
LYSMD3Q7Z3D4 U1.1-201ENST00000384101 164 ntBASIC4.38□□□□□ -1.71
LYSMD3Q7Z3D4 RNU6-1181P-201ENST00000384191 106 ntBASIC4.38□□□□□ -1.71
LYSMD3Q7Z3D4 RNA5SP39-201ENST00000411245 120 ntBASIC4.38□□□□□ -1.71
LYSMD3Q7Z3D4 AC004552.1-201ENST00000419089 348 ntBASIC4.38□□□□□ -1.71
LYSMD3Q7Z3D4 AIMP1P2-201ENST00000425294 312 ntBASIC4.38□□□□□ -1.71
LYSMD3Q7Z3D4 AL353748.1-201ENST00000440753 474 ntBASIC4.38□□□□□ -1.71
LYSMD3Q7Z3D4 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.38□□□□□ -1.71
LYSMD3Q7Z3D4 RPL35AP15-201ENST00000468042 339 ntBASIC4.38□□□□□ -1.71
LYSMD3Q7Z3D4 RPS26P3-201ENST00000470205 348 ntBASIC4.38□□□□□ -1.71
LYSMD3Q7Z3D4 AC090543.2-201ENST00000483963 348 ntBASIC4.38□□□□□ -1.71
LYSMD3Q7Z3D4 AC004057.1-201ENST00000485827 348 ntBASIC4.38□□□□□ -1.71
LYSMD3Q7Z3D4 SNORD33.1-201ENST00000516213 88 ntBASIC4.38□□□□□ -1.71
LYSMD3Q7Z3D4 NDUFA5P6-201ENST00000542110 379 ntBASIC4.38□□□□□ -1.71
LYSMD3Q7Z3D4 RPL23AP97-201ENST00000568955 471 ntBASIC4.38□□□□□ -1.71
LYSMD3Q7Z3D4 Y_RNA.757-201ENST00000578934 114 ntBASIC4.38□□□□□ -1.71
LYSMD3Q7Z3D4 MIR4724-201ENST00000579485 89 ntBASIC4.38□□□□□ -1.71
LYSMD3Q7Z3D4 AC011471.1-201ENST00000585766 187 ntBASIC4.38□□□□□ -1.71
LYSMD3Q7Z3D4 AL451007.1-201ENST00000595491 289 ntBASIC4.38□□□□□ -1.71
LYSMD3Q7Z3D4 AC113403.1-201ENST00000604910 193 ntBASIC4.38□□□□□ -1.71
LYSMD3Q7Z3D4 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.38□□□□□ -1.71
LYSMD3Q7Z3D4 AC068647.2-201ENST00000637380 353 ntBASIC4.38□□□□□ -1.71
LYSMD3Q7Z3D4 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.38□□□□□ -1.71
LYSMD3Q7Z3D4 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
LYSMD3Q7Z3D4 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.38□□□□□ -1.71
LYSMD3Q7Z3D4 AC016588.2-201ENST00000632484 3021 ntBASIC4.38□□□□□ -1.71
LYSMD3Q7Z3D4 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.37□□□□□ -1.71
LYSMD3Q7Z3D4 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.37□□□□□ -1.71
LYSMD3Q7Z3D4 MAPK10-253ENST00000641010 4072 ntBASIC4.37□□□□□ -1.71
LYSMD3Q7Z3D4 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
LYSMD3Q7Z3D4 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LYSMD3Q7Z3D4 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LYSMD3Q7Z3D4 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.37□□□□□ -1.71
LYSMD3Q7Z3D4 RNU6-884P-201ENST00000363889 107 ntBASIC4.37□□□□□ -1.71
LYSMD3Q7Z3D4 Y_RNA.243-201ENST00000364481 109 ntBASIC4.37□□□□□ -1.71
LYSMD3Q7Z3D4 Y_RNA.456-201ENST00000384232 111 ntBASIC4.37□□□□□ -1.71
LYSMD3Q7Z3D4 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LYSMD3Q7Z3D4 RNA5SP390-201ENST00000410191 113 ntBASIC4.37□□□□□ -1.71
LYSMD3Q7Z3D4 RPL23AP52-201ENST00000439311 478 ntBASIC4.37□□□□□ -1.71
LYSMD3Q7Z3D4 AC012308.1-201ENST00000451232 178 ntBASIC4.37□□□□□ -1.71
LYSMD3Q7Z3D4 AC010618.1-201ENST00000469924 477 ntBASIC4.37□□□□□ -1.71
LYSMD3Q7Z3D4 RN7SL812P-201ENST00000493791 279 ntBASIC4.37□□□□□ -1.71
LYSMD3Q7Z3D4 RNU6-581P-201ENST00000516214 105 ntBASIC4.37□□□□□ -1.71
LYSMD3Q7Z3D4 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC4.37□□□□□ -1.71
LYSMD3Q7Z3D4 AC006199.1-201ENST00000548728 219 ntBASIC4.37□□□□□ -1.71
LYSMD3Q7Z3D4 AC090897.2-201ENST00000581715 130 ntBASIC4.37□□□□□ -1.71
LYSMD3Q7Z3D4 AL020997.2-201ENST00000602607 184 ntBASIC4.37□□□□□ -1.71
LYSMD3Q7Z3D4 AL162713.1-201ENST00000604480 262 ntBASIC4.37□□□□□ -1.71
LYSMD3Q7Z3D4 uc_338.13-201ENST00000618243 179 ntBASIC4.37□□□□□ -1.71
LYSMD3Q7Z3D4 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.37□□□□□ -1.71
LYSMD3Q7Z3D4 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.37□□□□□ -1.71
LYSMD3Q7Z3D4 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LYSMD3Q7Z3D4 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms