Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 RNU6-827P-201ENST00000365553 106 ntBASIC2.38□□□□□ -2.03
NUP54Q7Z3B4 Y_RNA.373-201ENST00000365600 103 ntBASIC2.38□□□□□ -2.03
NUP54Q7Z3B4 RNU1-57P-201ENST00000384491 166 ntBASIC2.38□□□□□ -2.03
NUP54Q7Z3B4 Y_RNA.530-201ENST00000384587 101 ntBASIC2.38□□□□□ -2.03
NUP54Q7Z3B4 MIR95-201ENST00000385072 81 ntBASIC2.38□□□□□ -2.03
NUP54Q7Z3B4 MIR561-201ENST00000385216 97 ntBASIC2.38□□□□□ -2.03
NUP54Q7Z3B4 RNU2-23P-201ENST00000410545 195 ntBASIC2.38□□□□□ -2.03
NUP54Q7Z3B4 RNU6-1245P-201ENST00000411130 106 ntBASIC2.38□□□□□ -2.03
NUP54Q7Z3B4 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.38□□□□□ -2.03
NUP54Q7Z3B4 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.38□□□□□ -2.03
NUP54Q7Z3B4 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.38□□□□□ -2.03
NUP54Q7Z3B4 NDUFA5P4-201ENST00000436704 385 ntBASIC2.38□□□□□ -2.03
NUP54Q7Z3B4 MTATP6P13-201ENST00000438531 667 ntBASIC2.38□□□□□ -2.03
NUP54Q7Z3B4 RPS12P2-201ENST00000439728 269 ntBASIC2.38□□□□□ -2.03
NUP54Q7Z3B4 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.38□□□□□ -2.03
NUP54Q7Z3B4 AL359672.1-201ENST00000442302 409 ntBASIC2.38□□□□□ -2.03
NUP54Q7Z3B4 SRIP1-201ENST00000489235 288 ntBASIC2.38□□□□□ -2.03
NUP54Q7Z3B4 AC140059.1-201ENST00000489238 361 ntBASIC2.38□□□□□ -2.03
NUP54Q7Z3B4 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.38□□□□□ -2.03
NUP54Q7Z3B4 RNU7-193P-201ENST00000516723 65 ntBASIC2.38□□□□□ -2.03
NUP54Q7Z3B4 SNORA48.11-201ENST00000517015 89 ntBASIC2.38□□□□□ -2.03
NUP54Q7Z3B4 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.38□□□□□ -2.03
NUP54Q7Z3B4 AP000763.2-201ENST00000540641 163 ntBASIC2.38□□□□□ -2.03
NUP54Q7Z3B4 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.38□□□□□ -2.03
NUP54Q7Z3B4 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.38□□□□□ -2.03
NUP54Q7Z3B4 MIR3162-201ENST00000581818 82 ntBASIC2.38□□□□□ -2.03
NUP54Q7Z3B4 AP000907.4-201ENST00000604143 237 ntBASIC2.38□□□□□ -2.03
NUP54Q7Z3B4 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
NUP54Q7Z3B4 uc_338.15-201ENST00000615470 191 ntBASIC2.38□□□□□ -2.03
NUP54Q7Z3B4 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
NUP54Q7Z3B4 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
NUP54Q7Z3B4 SNORD113-7-201ENST00000363762 77 ntBASIC2.37□□□□□ -2.03
NUP54Q7Z3B4 RNU6-1106P-201ENST00000390845 107 ntBASIC2.37□□□□□ -2.03
NUP54Q7Z3B4 RNA5SP210-201ENST00000391034 120 ntBASIC2.37□□□□□ -2.03
NUP54Q7Z3B4 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
NUP54Q7Z3B4 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
NUP54Q7Z3B4 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.37□□□□□ -2.03
NUP54Q7Z3B4 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.37□□□□□ -2.03
NUP54Q7Z3B4 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
NUP54Q7Z3B4 MTCO2P3-201ENST00000442543 421 ntBASIC2.37□□□□□ -2.03
NUP54Q7Z3B4 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.37□□□□□ -2.03
NUP54Q7Z3B4 snoU13.14-201ENST00000459372 104 ntBASIC2.37□□□□□ -2.03
NUP54Q7Z3B4 AC007547.1-201ENST00000462177 490 ntBASIC2.37□□□□□ -2.03
NUP54Q7Z3B4 TRBVA-201ENST00000498804 316 ntBASIC2.37□□□□□ -2.03
NUP54Q7Z3B4 MTCYBP18-201ENST00000501056 747 ntBASIC2.37□□□□□ -2.03
NUP54Q7Z3B4 AK3P2-201ENST00000507976 429 ntBASIC2.37□□□□□ -2.03
NUP54Q7Z3B4 FAM206BP-201ENST00000510179 541 ntBASIC2.37□□□□□ -2.03
NUP54Q7Z3B4 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.37□□□□□ -2.03
NUP54Q7Z3B4 AP005597.4-201ENST00000526762 229 ntBASIC2.37□□□□□ -2.03
NUP54Q7Z3B4 AC243972.3-201ENST00000539655 198 ntBASIC2.37□□□□□ -2.03
NUP54Q7Z3B4 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.37□□□□□ -2.03
NUP54Q7Z3B4 AC103996.1-201ENST00000555468 102 ntBASIC2.37□□□□□ -2.03
NUP54Q7Z3B4 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.37□□□□□ -2.03
NUP54Q7Z3B4 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.37□□□□□ -2.03
NUP54Q7Z3B4 MIR4529-201ENST00000578110 78 ntBASIC2.37□□□□□ -2.03
NUP54Q7Z3B4 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.37□□□□□ -2.03
NUP54Q7Z3B4 MIR3670-2-201ENST00000582974 65 ntBASIC2.37□□□□□ -2.03
NUP54Q7Z3B4 MIR3670-1-201ENST00000584160 65 ntBASIC2.37□□□□□ -2.03
NUP54Q7Z3B4 MIR3670-3-201ENST00000584855 65 ntBASIC2.37□□□□□ -2.03
NUP54Q7Z3B4 MIR6840-201ENST00000611937 71 ntBASIC2.37□□□□□ -2.03
NUP54Q7Z3B4 MIR3670-4-201ENST00000612260 65 ntBASIC2.37□□□□□ -2.03
NUP54Q7Z3B4 AC097372.5-201ENST00000623665 376 ntBASIC2.37□□□□□ -2.03
NUP54Q7Z3B4 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.37□□□□□ -2.03
NUP54Q7Z3B4 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.37□□□□□ -2.03
NUP54Q7Z3B4 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.37□□□□□ -2.03
NUP54Q7Z3B4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
NUP54Q7Z3B4 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.37□□□□□ -2.03
NUP54Q7Z3B4 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
NUP54Q7Z3B4 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.36□□□□□ -2.03
NUP54Q7Z3B4 RNU6-254P-201ENST00000363377 107 ntBASIC2.36□□□□□ -2.03
NUP54Q7Z3B4 RNA5SP68-201ENST00000363885 119 ntBASIC2.36□□□□□ -2.03
NUP54Q7Z3B4 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
NUP54Q7Z3B4 MIR186-201ENST00000384988 86 ntBASIC2.36□□□□□ -2.03
NUP54Q7Z3B4 MIR27B-201ENST00000385129 97 ntBASIC2.36□□□□□ -2.03
NUP54Q7Z3B4 MIR450B-201ENST00000401182 78 ntBASIC2.36□□□□□ -2.03
NUP54Q7Z3B4 RNU6-293P-201ENST00000411259 106 ntBASIC2.36□□□□□ -2.03
NUP54Q7Z3B4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.36□□□□□ -2.03
NUP54Q7Z3B4 RPS15AP10-201ENST00000432472 382 ntBASIC2.36□□□□□ -2.03
NUP54Q7Z3B4 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.36□□□□□ -2.03
NUP54Q7Z3B4 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.36□□□□□ -2.03
NUP54Q7Z3B4 AC243964.1-201ENST00000441814 261 ntBASIC2.36□□□□□ -2.03
NUP54Q7Z3B4 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.36□□□□□ -2.03
NUP54Q7Z3B4 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.36□□□□□ -2.03
NUP54Q7Z3B4 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.36□□□□□ -2.03
NUP54Q7Z3B4 AC025423.5-201ENST00000550230 219 ntBASIC2.36□□□□□ -2.03
NUP54Q7Z3B4 MIR5694-201ENST00000581190 76 ntBASIC2.36□□□□□ -2.03
NUP54Q7Z3B4 AC100830.2-201ENST00000581636 240 ntBASIC2.36□□□□□ -2.03
NUP54Q7Z3B4 AC007229.1-201ENST00000590455 412 ntBASIC2.36□□□□□ -2.03
NUP54Q7Z3B4 AC009314.1-201ENST00000603871 304 ntBASIC2.36□□□□□ -2.03
NUP54Q7Z3B4 AC006023.1-201ENST00000603944 259 ntBASIC2.36□□□□□ -2.03
NUP54Q7Z3B4 FAM157A-202ENST00000615155 405 ntBASIC2.36□□□□□ -2.03
NUP54Q7Z3B4 AL159153.1-201ENST00000619688 317 ntBASIC2.36□□□□□ -2.03
NUP54Q7Z3B4 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.36□□□□□ -2.03
NUP54Q7Z3B4 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
NUP54Q7Z3B4 RNU6-529P-201ENST00000363383 104 ntBASIC2.35□□□□□ -2.03
NUP54Q7Z3B4 RNU6-1329P-201ENST00000365664 107 ntBASIC2.35□□□□□ -2.03
NUP54Q7Z3B4 RNU6-1222P-201ENST00000384615 107 ntBASIC2.35□□□□□ -2.03
NUP54Q7Z3B4 MIR544A-201ENST00000384855 91 ntBASIC2.35□□□□□ -2.03
NUP54Q7Z3B4 MIR144-201ENST00000384886 86 ntBASIC2.35□□□□□ -2.03
NUP54Q7Z3B4 SNORD73A-201ENST00000386062 65 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms