Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LRFN4Q6PJG9 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
LRFN4Q6PJG9 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LRFN4Q6PJG9 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LRFN4Q6PJG9 RNU6-1010P-201ENST00000362757 107 ntBASIC3.79□□□□□ -1.8
LRFN4Q6PJG9 RNU4-80P-201ENST00000363200 141 ntBASIC3.79□□□□□ -1.8
LRFN4Q6PJG9 RNU6-923P-201ENST00000364753 107 ntBASIC3.79□□□□□ -1.8
LRFN4Q6PJG9 Y_RNA.304-201ENST00000365011 112 ntBASIC3.79□□□□□ -1.8
LRFN4Q6PJG9 RNU1-89P-201ENST00000384592 164 ntBASIC3.79□□□□□ -1.8
LRFN4Q6PJG9 MTCO2P33-201ENST00000402100 465 ntBASIC3.79□□□□□ -1.8
LRFN4Q6PJG9 CBX3P9-201ENST00000402326 552 ntBASIC3.79□□□□□ -1.8
LRFN4Q6PJG9 Z98941.1-201ENST00000407764 100 ntBASIC3.79□□□□□ -1.8
LRFN4Q6PJG9 Y_RNA.625-201ENST00000411256 107 ntBASIC3.79□□□□□ -1.8
LRFN4Q6PJG9 AC009237.7-201ENST00000447357 229 ntBASIC3.79□□□□□ -1.8
LRFN4Q6PJG9 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.79□□□□□ -1.8
LRFN4Q6PJG9 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.79□□□□□ -1.8
LRFN4Q6PJG9 RNU6-191P-201ENST00000516295 94 ntBASIC3.79□□□□□ -1.8
LRFN4Q6PJG9 RNU6-155P-201ENST00000516347 100 ntBASIC3.79□□□□□ -1.8
LRFN4Q6PJG9 RAB9BP1-201ENST00000519581 626 ntBASIC3.79□□□□□ -1.8
LRFN4Q6PJG9 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.79□□□□□ -1.8
LRFN4Q6PJG9 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LRFN4Q6PJG9 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.79□□□□□ -1.8
LRFN4Q6PJG9 uc_338.32-201ENST00000615087 172 ntBASIC3.79□□□□□ -1.8
LRFN4Q6PJG9 AC092628.2-201ENST00000622492 339 ntBASIC3.79□□□□□ -1.8
LRFN4Q6PJG9 MIR3674-201ENST00000636576 68 ntBASIC3.79□□□□□ -1.8
LRFN4Q6PJG9 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
LRFN4Q6PJG9 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.79□□□□□ -1.8
LRFN4Q6PJG9 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LRFN4Q6PJG9 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
LRFN4Q6PJG9 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
LRFN4Q6PJG9 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LRFN4Q6PJG9 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LRFN4Q6PJG9 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
LRFN4Q6PJG9 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.78□□□□□ -1.8
LRFN4Q6PJG9 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LRFN4Q6PJG9 Y_RNA.308-201ENST00000365043 101 ntBASIC3.78□□□□□ -1.8
LRFN4Q6PJG9 SNORA56-201ENST00000383966 129 ntBASIC3.78□□□□□ -1.8
LRFN4Q6PJG9 MIR549A-201ENST00000385268 96 ntBASIC3.78□□□□□ -1.8
LRFN4Q6PJG9 SNORA40.19-201ENST00000390846 128 ntBASIC3.78□□□□□ -1.8
LRFN4Q6PJG9 RNU2-54P-201ENST00000410299 190 ntBASIC3.78□□□□□ -1.8
LRFN4Q6PJG9 RN7SKP51-201ENST00000410781 304 ntBASIC3.78□□□□□ -1.8
LRFN4Q6PJG9 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.78□□□□□ -1.8
LRFN4Q6PJG9 snoU13.14-201ENST00000459372 104 ntBASIC3.78□□□□□ -1.8
LRFN4Q6PJG9 RNU7-23P-201ENST00000459465 62 ntBASIC3.78□□□□□ -1.8
LRFN4Q6PJG9 UQCRHP4-201ENST00000471686 272 ntBASIC3.78□□□□□ -1.8
LRFN4Q6PJG9 RNU6-966P-201ENST00000516479 104 ntBASIC3.78□□□□□ -1.8
LRFN4Q6PJG9 RNA5SP73-201ENST00000516744 108 ntBASIC3.78□□□□□ -1.8
LRFN4Q6PJG9 MRPS18CP4-201ENST00000535821 231 ntBASIC3.78□□□□□ -1.8
LRFN4Q6PJG9 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.78□□□□□ -1.8
LRFN4Q6PJG9 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.78□□□□□ -1.8
LRFN4Q6PJG9 MIR5692C2-201ENST00000577959 77 ntBASIC3.78□□□□□ -1.8
LRFN4Q6PJG9 MIR5096-201ENST00000583713 70 ntBASIC3.78□□□□□ -1.8
LRFN4Q6PJG9 MIR432-201ENST00000606207 94 ntBASIC3.78□□□□□ -1.8
LRFN4Q6PJG9 AL138880.2-201ENST00000616214 239 ntBASIC3.78□□□□□ -1.8
LRFN4Q6PJG9 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.78□□□□□ -1.8
LRFN4Q6PJG9 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.78□□□□□ -1.8
LRFN4Q6PJG9 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LRFN4Q6PJG9 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.81
LRFN4Q6PJG9 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.77□□□□□ -1.81
LRFN4Q6PJG9 MIR423-201ENST00000362201 94 ntBASIC3.77□□□□□ -1.81
LRFN4Q6PJG9 RNA5SP388-201ENST00000362584 119 ntBASIC3.77□□□□□ -1.81
LRFN4Q6PJG9 RNU1-132P-201ENST00000364300 164 ntBASIC3.77□□□□□ -1.81
LRFN4Q6PJG9 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
LRFN4Q6PJG9 RNA5SP475-201ENST00000410568 110 ntBASIC3.77□□□□□ -1.81
LRFN4Q6PJG9 RNU6-1199P-201ENST00000411249 104 ntBASIC3.77□□□□□ -1.81
LRFN4Q6PJG9 AC024067.1-201ENST00000426199 223 ntBASIC3.77□□□□□ -1.81
LRFN4Q6PJG9 DNAJC19P7-201ENST00000428811 344 ntBASIC3.77□□□□□ -1.81
LRFN4Q6PJG9 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.77□□□□□ -1.81
LRFN4Q6PJG9 AC006463.2-201ENST00000473326 348 ntBASIC3.77□□□□□ -1.81
LRFN4Q6PJG9 AC006517.1-201ENST00000480485 328 ntBASIC3.77□□□□□ -1.81
LRFN4Q6PJG9 AC103975.1-201ENST00000482506 483 ntBASIC3.77□□□□□ -1.81
LRFN4Q6PJG9 RN7SL691P-201ENST00000494487 301 ntBASIC3.77□□□□□ -1.81
LRFN4Q6PJG9 RNA5SP49-201ENST00000516450 115 ntBASIC3.77□□□□□ -1.81
LRFN4Q6PJG9 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.77□□□□□ -1.81
LRFN4Q6PJG9 MIR4308-201ENST00000580634 81 ntBASIC3.77□□□□□ -1.81
LRFN4Q6PJG9 AC012493.2-201ENST00000595083 291 ntBASIC3.77□□□□□ -1.81
LRFN4Q6PJG9 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.77□□□□□ -1.81
LRFN4Q6PJG9 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.77□□□□□ -1.81
LRFN4Q6PJG9 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.77□□□□□ -1.81
LRFN4Q6PJG9 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
LRFN4Q6PJG9 AC007496.3-201ENST00000624987 3443 ntBASIC3.77□□□□□ -1.81
LRFN4Q6PJG9 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
LRFN4Q6PJG9 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
LRFN4Q6PJG9 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.77□□□□□ -1.81
LRFN4Q6PJG9 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LRFN4Q6PJG9 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LRFN4Q6PJG9 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.76□□□□□ -1.81
LRFN4Q6PJG9 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LRFN4Q6PJG9 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.76□□□□□ -1.81
LRFN4Q6PJG9 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.76□□□□□ -1.81
LRFN4Q6PJG9 RNU1-14P-201ENST00000362759 152 ntBASIC3.76□□□□□ -1.81
LRFN4Q6PJG9 SNORD114-19-201ENST00000363072 75 ntBASIC3.76□□□□□ -1.81
LRFN4Q6PJG9 RNU6-727P-201ENST00000363592 107 ntBASIC3.76□□□□□ -1.81
LRFN4Q6PJG9 RNU1-32P-201ENST00000363937 159 ntBASIC3.76□□□□□ -1.81
LRFN4Q6PJG9 RNU6-211P-201ENST00000384047 107 ntBASIC3.76□□□□□ -1.81
LRFN4Q6PJG9 RNU6-198P-201ENST00000384258 104 ntBASIC3.76□□□□□ -1.81
LRFN4Q6PJG9 MIR548I2-201ENST00000408348 149 ntBASIC3.76□□□□□ -1.81
LRFN4Q6PJG9 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.76□□□□□ -1.81
LRFN4Q6PJG9 AC096649.2-201ENST00000416186 393 ntBASIC3.76□□□□□ -1.81
LRFN4Q6PJG9 OOSP1P1-201ENST00000423265 274 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms