Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AL078605.1-201ENST00000603529 500 ntBASIC3.81□□□□□ -1.8
CNKSR3Q6P9H4 AF117829.1-206ENST00000621883 3802 ntBASIC3.81□□□□□ -1.8
CNKSR3Q6P9H4 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CNKSR3Q6P9H4 AL353743.1-202ENST00000431724 1695 ntBASIC3.81□□□□□ -1.8
CNKSR3Q6P9H4 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.81□□□□□ -1.8
CNKSR3Q6P9H4 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.81□□□□□ -1.8
CNKSR3Q6P9H4 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 RNU6-222P-201ENST00000362438 107 ntBASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 RNU6-227P-201ENST00000362865 103 ntBASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 RNA5SP374-201ENST00000362939 125 ntBASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 SNORD50B-201ENST00000364995 70 ntBASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 UBA52P6-201ENST00000399822 382 ntBASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 AL033519.2-201ENST00000403958 392 ntBASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 RNU6-394P-201ENST00000410735 107 ntBASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 Y_RNA.623-201ENST00000411128 95 ntBASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 RN7SKP53-201ENST00000411337 315 ntBASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 RPL21P40-201ENST00000428586 483 ntBASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 AC006028.1-201ENST00000438379 402 ntBASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 HMGN2P7-201ENST00000456186 273 ntBASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 RPS26P21-201ENST00000475397 348 ntBASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 Y_RNA.662-201ENST00000516028 97 ntBASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 SNORA70.14-201ENST00000516205 110 ntBASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 RNU6-1256P-201ENST00000516539 103 ntBASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 MIR3144-201ENST00000579460 79 ntBASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 MIR4644-201ENST00000579929 84 ntBASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 MIR4513-201ENST00000581077 86 ntBASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 AL139395.1-201ENST00000603662 160 ntBASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 AL137843.1-201ENST00000605078 385 ntBASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 AL110115.1-201ENST00000614396 364 ntBASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 U6.106-201ENST00000636360 105 ntBASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 AF127577.6-201ENST00000623352 2191 ntBASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.8□□□□□ -1.8
CNKSR3Q6P9H4 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CNKSR3Q6P9H4 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CNKSR3Q6P9H4 MFSD8-233ENST00000641482 4860 ntBASIC3.79□□□□□ -1.8
CNKSR3Q6P9H4 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.79□□□□□ -1.8
CNKSR3Q6P9H4 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CNKSR3Q6P9H4 SNORD6-201ENST00000365444 73 ntBASIC3.79□□□□□ -1.8
CNKSR3Q6P9H4 MIR10A-201ENST00000385043 110 ntBASIC3.79□□□□□ -1.8
CNKSR3Q6P9H4 RNU6-918P-201ENST00000391219 106 ntBASIC3.79□□□□□ -1.8
CNKSR3Q6P9H4 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.79□□□□□ -1.8
CNKSR3Q6P9H4 PIGFP3-201ENST00000441918 722 ntBASIC3.79□□□□□ -1.8
CNKSR3Q6P9H4 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.79□□□□□ -1.8
CNKSR3Q6P9H4 FABP5P15-201ENST00000453566 214 ntBASIC3.79□□□□□ -1.8
CNKSR3Q6P9H4 ANP32BP2-201ENST00000454525 545 ntBASIC3.79□□□□□ -1.8
CNKSR3Q6P9H4 RN7SL504P-201ENST00000494496 287 ntBASIC3.79□□□□□ -1.8
CNKSR3Q6P9H4 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.79□□□□□ -1.8
CNKSR3Q6P9H4 FCF1P8-201ENST00000510322 597 ntBASIC3.79□□□□□ -1.8
CNKSR3Q6P9H4 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.79□□□□□ -1.8
CNKSR3Q6P9H4 MIR5004-201ENST00000579078 107 ntBASIC3.79□□□□□ -1.8
CNKSR3Q6P9H4 AC010928.2-201ENST00000588017 287 ntBASIC3.79□□□□□ -1.8
CNKSR3Q6P9H4 AL162424.1-201ENST00000602325 221 ntBASIC3.79□□□□□ -1.8
CNKSR3Q6P9H4 AC104465.1-201ENST00000611365 139 ntBASIC3.79□□□□□ -1.8
CNKSR3Q6P9H4 AC012531.5-201ENST00000611375 151 ntBASIC3.79□□□□□ -1.8
CNKSR3Q6P9H4 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.79□□□□□ -1.8
CNKSR3Q6P9H4 Z83843.1-201ENST00000604070 3685 ntBASIC3.79□□□□□ -1.8
CNKSR3Q6P9H4 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.79□□□□□ -1.8
CNKSR3Q6P9H4 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CNKSR3Q6P9H4 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CNKSR3Q6P9H4 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CNKSR3Q6P9H4 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CNKSR3Q6P9H4 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.78□□□□□ -1.8
CNKSR3Q6P9H4 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CNKSR3Q6P9H4 Y_RNA.8-201ENST00000362353 102 ntBASIC3.78□□□□□ -1.8
CNKSR3Q6P9H4 Y_RNA.240-201ENST00000364469 95 ntBASIC3.78□□□□□ -1.8
CNKSR3Q6P9H4 RNU6-326P-201ENST00000365480 107 ntBASIC3.78□□□□□ -1.8
CNKSR3Q6P9H4 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.78□□□□□ -1.8
CNKSR3Q6P9H4 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.78□□□□□ -1.8
CNKSR3Q6P9H4 AL627311.1-201ENST00000431514 115 ntBASIC3.78□□□□□ -1.8
CNKSR3Q6P9H4 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.78□□□□□ -1.8
CNKSR3Q6P9H4 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.78□□□□□ -1.8
CNKSR3Q6P9H4 RPL21P13-201ENST00000488305 481 ntBASIC3.78□□□□□ -1.8
CNKSR3Q6P9H4 MRPS18CP4-201ENST00000535821 231 ntBASIC3.78□□□□□ -1.8
CNKSR3Q6P9H4 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.78□□□□□ -1.8
CNKSR3Q6P9H4 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.78□□□□□ -1.8
CNKSR3Q6P9H4 MIR4282-201ENST00000583613 67 ntBASIC3.78□□□□□ -1.8
CNKSR3Q6P9H4 MIR4276-201ENST00000584832 70 ntBASIC3.78□□□□□ -1.8
CNKSR3Q6P9H4 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.78□□□□□ -1.8
CNKSR3Q6P9H4 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CNKSR3Q6P9H4 AL356274.2-201ENST00000624379 3752 ntBASIC3.78□□□□□ -1.8
CNKSR3Q6P9H4 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CNKSR3Q6P9H4 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CNKSR3Q6P9H4 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms