Protein–RNA interactions for Protein: Q6P9F5

TRIM40, Tripartite motif-containing protein 40, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40Q6P9F5 KATNBL1P3-201ENST00000443475 909 ntBASIC1.64□□□□□ -2.15
TRIM40Q6P9F5 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.64□□□□□ -2.15
TRIM40Q6P9F5 MTND1P27-201ENST00000451117 902 ntBASIC1.64□□□□□ -2.15
TRIM40Q6P9F5 PRELID3BP1-201ENST00000457142 540 ntBASIC1.64□□□□□ -2.15
TRIM40Q6P9F5 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.64□□□□□ -2.15
TRIM40Q6P9F5 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
TRIM40Q6P9F5 LRRC34P2-201ENST00000514850 553 ntBASIC1.64□□□□□ -2.15
TRIM40Q6P9F5 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.64□□□□□ -2.15
TRIM40Q6P9F5 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.64□□□□□ -2.15
TRIM40Q6P9F5 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.64□□□□□ -2.15
TRIM40Q6P9F5 AL590229.1-201ENST00000603497 542 ntBASIC1.64□□□□□ -2.15
TRIM40Q6P9F5 RNU6-6P-201ENST00000606623 107 ntBASIC1.64□□□□□ -2.15
TRIM40Q6P9F5 AP000770.2-201ENST00000623694 100 ntBASIC1.64□□□□□ -2.15
TRIM40Q6P9F5 AC091932.3-201ENST00000624223 323 ntBASIC1.64□□□□□ -2.15
TRIM40Q6P9F5 AC009161.2-201ENST00000624626 138 ntBASIC1.64□□□□□ -2.15
TRIM40Q6P9F5 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.64□□□□□ -2.15
TRIM40Q6P9F5 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
TRIM40Q6P9F5 RNU6-606P-201ENST00000384721 111 ntBASIC1.63□□□□□ -2.15
TRIM40Q6P9F5 MIR1283-2-201ENST00000408621 87 ntBASIC1.63□□□□□ -2.15
TRIM40Q6P9F5 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.63□□□□□ -2.15
TRIM40Q6P9F5 IFNA20P-201ENST00000436840 528 ntBASIC1.63□□□□□ -2.15
TRIM40Q6P9F5 AL031667.1-201ENST00000440222 725 ntBASIC1.63□□□□□ -2.15
TRIM40Q6P9F5 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.63□□□□□ -2.15
TRIM40Q6P9F5 MTND1P18-201ENST00000448191 573 ntBASIC1.63□□□□□ -2.15
TRIM40Q6P9F5 AC245102.2-201ENST00000448956 180 ntBASIC1.63□□□□□ -2.15
TRIM40Q6P9F5 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.63□□□□□ -2.15
TRIM40Q6P9F5 PPP1R2P5-201ENST00000457256 603 ntBASIC1.63□□□□□ -2.15
TRIM40Q6P9F5 MTCO2P6-201ENST00000463134 685 ntBASIC1.63□□□□□ -2.15
TRIM40Q6P9F5 GMFBP1-201ENST00000467831 427 ntBASIC1.63□□□□□ -2.15
TRIM40Q6P9F5 MTCO3P7-201ENST00000510008 774 ntBASIC1.63□□□□□ -2.15
TRIM40Q6P9F5 RNU6-965P-201ENST00000516721 96 ntBASIC1.63□□□□□ -2.15
TRIM40Q6P9F5 RNU6-548P-201ENST00000517083 115 ntBASIC1.63□□□□□ -2.15
TRIM40Q6P9F5 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
TRIM40Q6P9F5 AP001893.2-201ENST00000526949 202 ntBASIC1.63□□□□□ -2.15
TRIM40Q6P9F5 AP002963.1-201ENST00000530590 184 ntBASIC1.63□□□□□ -2.15
TRIM40Q6P9F5 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.63□□□□□ -2.15
TRIM40Q6P9F5 AC023050.3-201ENST00000541142 333 ntBASIC1.63□□□□□ -2.15
TRIM40Q6P9F5 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.63□□□□□ -2.15
TRIM40Q6P9F5 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.63□□□□□ -2.15
TRIM40Q6P9F5 AC015712.3-201ENST00000559380 164 ntBASIC1.63□□□□□ -2.15
TRIM40Q6P9F5 AC104581.2-201ENST00000572227 430 ntBASIC1.63□□□□□ -2.15
TRIM40Q6P9F5 MIR3913-1-201ENST00000577744 102 ntBASIC1.63□□□□□ -2.15
TRIM40Q6P9F5 MIR4524B-201ENST00000581569 115 ntBASIC1.63□□□□□ -2.15
TRIM40Q6P9F5 MIR3124-201ENST00000582636 67 ntBASIC1.63□□□□□ -2.15
TRIM40Q6P9F5 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.63□□□□□ -2.15
TRIM40Q6P9F5 AC072046.2-201ENST00000618366 268 ntBASIC1.63□□□□□ -2.15
TRIM40Q6P9F5 AC099842.1-201ENST00000619919 596 ntBASIC1.63□□□□□ -2.15
TRIM40Q6P9F5 AC022418.1-201ENST00000624118 445 ntBASIC1.63□□□□□ -2.15
TRIM40Q6P9F5 AL359757.2-201ENST00000624309 274 ntBASIC1.63□□□□□ -2.15
TRIM40Q6P9F5 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
TRIM40Q6P9F5 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
TRIM40Q6P9F5 SNORD14D-201ENST00000384390 87 ntBASIC1.62□□□□□ -2.15
TRIM40Q6P9F5 RNU6-393P-201ENST00000384475 107 ntBASIC1.62□□□□□ -2.15
TRIM40Q6P9F5 Y_RNA.597-201ENST00000410463 100 ntBASIC1.62□□□□□ -2.15
TRIM40Q6P9F5 RNU6-1245P-201ENST00000411130 106 ntBASIC1.62□□□□□ -2.15
TRIM40Q6P9F5 SRIP3-201ENST00000413200 219 ntBASIC1.62□□□□□ -2.15
TRIM40Q6P9F5 AL158823.1-201ENST00000418441 478 ntBASIC1.62□□□□□ -2.15
TRIM40Q6P9F5 CYCSP49-201ENST00000420810 319 ntBASIC1.62□□□□□ -2.15
TRIM40Q6P9F5 CBX3P6-201ENST00000430257 527 ntBASIC1.62□□□□□ -2.15
TRIM40Q6P9F5 MTND2P29-201ENST00000438595 412 ntBASIC1.62□□□□□ -2.15
TRIM40Q6P9F5 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.62□□□□□ -2.15
TRIM40Q6P9F5 RPS27AP8-201ENST00000452665 445 ntBASIC1.62□□□□□ -2.15
TRIM40Q6P9F5 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.62□□□□□ -2.15
TRIM40Q6P9F5 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.62□□□□□ -2.15
TRIM40Q6P9F5 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.62□□□□□ -2.15
TRIM40Q6P9F5 AC108210.2-201ENST00000503681 201 ntBASIC1.62□□□□□ -2.15
TRIM40Q6P9F5 HMGB3P17-201ENST00000504195 649 ntBASIC1.62□□□□□ -2.15
TRIM40Q6P9F5 PTP4A1P4-201ENST00000512479 322 ntBASIC1.62□□□□□ -2.15
TRIM40Q6P9F5 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.62□□□□□ -2.15
TRIM40Q6P9F5 RNU6-377P-201ENST00000515965 102 ntBASIC1.62□□□□□ -2.15
TRIM40Q6P9F5 RNU5F-2P-201ENST00000516066 82 ntBASIC1.62□□□□□ -2.15
TRIM40Q6P9F5 RNU6-250P-201ENST00000516958 103 ntBASIC1.62□□□□□ -2.15
TRIM40Q6P9F5 AC109479.2-201ENST00000517842 174 ntBASIC1.62□□□□□ -2.15
TRIM40Q6P9F5 AC115990.1-201ENST00000526957 301 ntBASIC1.62□□□□□ -2.15
TRIM40Q6P9F5 AC243960.4-201ENST00000600532 288 ntBASIC1.62□□□□□ -2.15
TRIM40Q6P9F5 AC005034.5-201ENST00000604219 466 ntBASIC1.62□□□□□ -2.15
TRIM40Q6P9F5 AC012493.3-201ENST00000604494 112 ntBASIC1.62□□□□□ -2.15
TRIM40Q6P9F5 MIR502-201ENST00000606349 86 ntBASIC1.62□□□□□ -2.15
TRIM40Q6P9F5 AC109347.2-201ENST00000610220 349 ntBASIC1.62□□□□□ -2.15
TRIM40Q6P9F5 AL390237.1-201ENST00000404226 1415 ntBASIC1.62□□□□□ -2.15
TRIM40Q6P9F5 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
TRIM40Q6P9F5 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.61□□□□□ -2.15
TRIM40Q6P9F5 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
TRIM40Q6P9F5 RNU6-1285P-201ENST00000363480 105 ntBASIC1.61□□□□□ -2.15
TRIM40Q6P9F5 Y_RNA.480-201ENST00000384364 102 ntBASIC1.61□□□□□ -2.15
TRIM40Q6P9F5 RNU6-434P-201ENST00000384376 107 ntBASIC1.61□□□□□ -2.15
TRIM40Q6P9F5 RNU6-1127P-201ENST00000384580 107 ntBASIC1.61□□□□□ -2.15
TRIM40Q6P9F5 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
TRIM40Q6P9F5 RNA5SP465-201ENST00000391195 109 ntBASIC1.61□□□□□ -2.15
TRIM40Q6P9F5 RN7SKP142-201ENST00000411236 328 ntBASIC1.61□□□□□ -2.15
TRIM40Q6P9F5 AL030996.1-201ENST00000411430 235 ntBASIC1.61□□□□□ -2.15
TRIM40Q6P9F5 SNORD56-201ENST00000413522 71 ntBASIC1.61□□□□□ -2.15
TRIM40Q6P9F5 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
TRIM40Q6P9F5 AL590556.1-201ENST00000423231 483 ntBASIC1.61□□□□□ -2.15
TRIM40Q6P9F5 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.61□□□□□ -2.15
TRIM40Q6P9F5 BX510359.4-201ENST00000423750 193 ntBASIC1.61□□□□□ -2.15
TRIM40Q6P9F5 AC243964.1-201ENST00000441814 261 ntBASIC1.61□□□□□ -2.15
TRIM40Q6P9F5 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.61□□□□□ -2.15
TRIM40Q6P9F5 PRPS1P1-201ENST00000445305 876 ntBASIC1.61□□□□□ -2.15
TRIM40Q6P9F5 AC132479.1-201ENST00000449160 144 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms