Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PRPF40BQ6NWY9 AC007656.2-201ENST00000624902 4547 ntBASIC4.38□□□□□ -1.71
PRPF40BQ6NWY9 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PRPF40BQ6NWY9 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
PRPF40BQ6NWY9 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.38□□□□□ -1.71
PRPF40BQ6NWY9 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PRPF40BQ6NWY9 Y_RNA.16-201ENST00000362421 102 ntBASIC4.38□□□□□ -1.71
PRPF40BQ6NWY9 SNORD113-8-201ENST00000363497 74 ntBASIC4.38□□□□□ -1.71
PRPF40BQ6NWY9 Y_RNA.277-201ENST00000364754 102 ntBASIC4.38□□□□□ -1.71
PRPF40BQ6NWY9 Z98749.2-208ENST00000381646 500 ntBASIC4.38□□□□□ -1.71
PRPF40BQ6NWY9 RNU6-1286P-201ENST00000383871 107 ntBASIC4.38□□□□□ -1.71
PRPF40BQ6NWY9 RNU6-926P-201ENST00000384075 107 ntBASIC4.38□□□□□ -1.71
PRPF40BQ6NWY9 RNU6-217P-201ENST00000384164 104 ntBASIC4.38□□□□□ -1.71
PRPF40BQ6NWY9 Y_RNA.462-201ENST00000384268 102 ntBASIC4.38□□□□□ -1.71
PRPF40BQ6NWY9 Y_RNA.510-201ENST00000384511 114 ntBASIC4.38□□□□□ -1.71
PRPF40BQ6NWY9 SNORD116-20-201ENST00000384529 92 ntBASIC4.38□□□□□ -1.71
PRPF40BQ6NWY9 MIR153-2-201ENST00000385225 87 ntBASIC4.38□□□□□ -1.71
PRPF40BQ6NWY9 Y_RNA.581-201ENST00000391017 97 ntBASIC4.38□□□□□ -1.71
PRPF40BQ6NWY9 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.38□□□□□ -1.71
PRPF40BQ6NWY9 RPS23P5-201ENST00000495419 428 ntBASIC4.38□□□□□ -1.71
PRPF40BQ6NWY9 RNU2-58P-201ENST00000516403 183 ntBASIC4.38□□□□□ -1.71
PRPF40BQ6NWY9 RNU6-1012P-201ENST00000516606 109 ntBASIC4.38□□□□□ -1.71
PRPF40BQ6NWY9 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.38□□□□□ -1.71
PRPF40BQ6NWY9 AL137100.2-201ENST00000555786 315 ntBASIC4.38□□□□□ -1.71
PRPF40BQ6NWY9 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.38□□□□□ -1.71
PRPF40BQ6NWY9 MIR5680-201ENST00000577577 84 ntBASIC4.38□□□□□ -1.71
PRPF40BQ6NWY9 AC010928.2-201ENST00000588017 287 ntBASIC4.38□□□□□ -1.71
PRPF40BQ6NWY9 RPL23AP88-201ENST00000605759 454 ntBASIC4.38□□□□□ -1.71
PRPF40BQ6NWY9 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
PRPF40BQ6NWY9 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PRPF40BQ6NWY9 AC090740.1-201ENST00000623193 2262 ntBASIC4.37□□□□□ -1.71
PRPF40BQ6NWY9 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PRPF40BQ6NWY9 RNU6-283P-201ENST00000364788 107 ntBASIC4.37□□□□□ -1.71
PRPF40BQ6NWY9 Y_RNA.297-201ENST00000364950 91 ntBASIC4.37□□□□□ -1.71
PRPF40BQ6NWY9 RNU1-73P-201ENST00000383971 164 ntBASIC4.37□□□□□ -1.71
PRPF40BQ6NWY9 RNU6-17P-201ENST00000384245 107 ntBASIC4.37□□□□□ -1.71
PRPF40BQ6NWY9 RNU6-937P-201ENST00000384325 106 ntBASIC4.37□□□□□ -1.71
PRPF40BQ6NWY9 RNU6-18P-201ENST00000384527 107 ntBASIC4.37□□□□□ -1.71
PRPF40BQ6NWY9 RNU6-541P-201ENST00000384709 110 ntBASIC4.37□□□□□ -1.71
PRPF40BQ6NWY9 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC4.37□□□□□ -1.71
PRPF40BQ6NWY9 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.37□□□□□ -1.71
PRPF40BQ6NWY9 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PRPF40BQ6NWY9 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.37□□□□□ -1.71
PRPF40BQ6NWY9 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PRPF40BQ6NWY9 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PRPF40BQ6NWY9 SRP72P2-201ENST00000344851 1979 ntBASIC4.36□□□□□ -1.71
PRPF40BQ6NWY9 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
PRPF40BQ6NWY9 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.36□□□□□ -1.71
PRPF40BQ6NWY9 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PRPF40BQ6NWY9 RNU6-858P-201ENST00000362436 107 ntBASIC4.36□□□□□ -1.71
PRPF40BQ6NWY9 SNORD115-32-201ENST00000364079 82 ntBASIC4.36□□□□□ -1.71
PRPF40BQ6NWY9 RNU1-140P-201ENST00000365040 165 ntBASIC4.36□□□□□ -1.71
PRPF40BQ6NWY9 RNU6-142P-201ENST00000384019 107 ntBASIC4.36□□□□□ -1.71
PRPF40BQ6NWY9 Y_RNA.541-201ENST00000384640 113 ntBASIC4.36□□□□□ -1.71
PRPF40BQ6NWY9 AL138878.1-201ENST00000405131 347 ntBASIC4.36□□□□□ -1.71
PRPF40BQ6NWY9 MIR548M-201ENST00000408260 86 ntBASIC4.36□□□□□ -1.71
PRPF40BQ6NWY9 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.36□□□□□ -1.71
PRPF40BQ6NWY9 RPS15AP7-201ENST00000439294 405 ntBASIC4.36□□□□□ -1.71
PRPF40BQ6NWY9 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.36□□□□□ -1.71
PRPF40BQ6NWY9 HMGB3P8-201ENST00000449709 577 ntBASIC4.36□□□□□ -1.71
PRPF40BQ6NWY9 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.36□□□□□ -1.71
PRPF40BQ6NWY9 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.36□□□□□ -1.71
PRPF40BQ6NWY9 AC087477.1-201ENST00000465747 340 ntBASIC4.36□□□□□ -1.71
PRPF40BQ6NWY9 RPL23AP14-201ENST00000468281 468 ntBASIC4.36□□□□□ -1.71
PRPF40BQ6NWY9 SNRPGP7-201ENST00000469016 106 ntBASIC4.36□□□□□ -1.71
PRPF40BQ6NWY9 IGKV2-26-201ENST00000518305 343 ntBASIC4.36□□□□□ -1.71
PRPF40BQ6NWY9 AC022080.3-201ENST00000544433 482 ntBASIC4.36□□□□□ -1.71
PRPF40BQ6NWY9 AC026470.2-201ENST00000561492 181 ntBASIC4.36□□□□□ -1.71
PRPF40BQ6NWY9 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PRPF40BQ6NWY9 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.36□□□□□ -1.71
PRPF40BQ6NWY9 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PRPF40BQ6NWY9 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.36□□□□□ -1.71
PRPF40BQ6NWY9 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
PRPF40BQ6NWY9 SNORD56.1-201ENST00000362913 68 ntBASIC4.35□□□□□ -1.71
PRPF40BQ6NWY9 RNU6-884P-201ENST00000363889 107 ntBASIC4.35□□□□□ -1.71
PRPF40BQ6NWY9 Y_RNA.270-201ENST00000364693 104 ntBASIC4.35□□□□□ -1.71
PRPF40BQ6NWY9 Y_RNA.555-201ENST00000384673 110 ntBASIC4.35□□□□□ -1.71
PRPF40BQ6NWY9 MIR518D-201ENST00000385014 87 ntBASIC4.35□□□□□ -1.71
PRPF40BQ6NWY9 RNA5SP239-201ENST00000410218 129 ntBASIC4.35□□□□□ -1.71
PRPF40BQ6NWY9 FTH1P6-201ENST00000430768 320 ntBASIC4.35□□□□□ -1.71
PRPF40BQ6NWY9 AL445305.1-201ENST00000432577 575 ntBASIC4.35□□□□□ -1.71
PRPF40BQ6NWY9 AC243964.1-201ENST00000441814 261 ntBASIC4.35□□□□□ -1.71
PRPF40BQ6NWY9 RPL30P1-201ENST00000488676 339 ntBASIC4.35□□□□□ -1.71
PRPF40BQ6NWY9 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.35□□□□□ -1.71
PRPF40BQ6NWY9 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.35□□□□□ -1.71
PRPF40BQ6NWY9 AP003355.3-201ENST00000623465 114 ntBASIC4.35□□□□□ -1.71
PRPF40BQ6NWY9 AC244205.2-202ENST00000635781 342 ntBASIC4.35□□□□□ -1.71
PRPF40BQ6NWY9 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.35□□□□□ -1.71
PRPF40BQ6NWY9 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PRPF40BQ6NWY9 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PRPF40BQ6NWY9 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.35□□□□□ -1.71
PRPF40BQ6NWY9 AL672296.1-201ENST00000427780 2158 ntBASIC4.34□□□□□ -1.71
PRPF40BQ6NWY9 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PRPF40BQ6NWY9 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
PRPF40BQ6NWY9 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PRPF40BQ6NWY9 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
PRPF40BQ6NWY9 RNU6-778P-201ENST00000363269 103 ntBASIC4.34□□□□□ -1.71
PRPF40BQ6NWY9 Y_RNA.274-201ENST00000364714 101 ntBASIC4.34□□□□□ -1.71
PRPF40BQ6NWY9 AL033519.2-201ENST00000403958 392 ntBASIC4.34□□□□□ -1.71
PRPF40BQ6NWY9 MTHFD2P2-201ENST00000407725 247 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms