Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 OTUD4P1-201ENST00000237841 3067 ntBASIC4.41□□□□□ -1.7
USPL1Q5W0Q7 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
USPL1Q5W0Q7 RNA5SP502-201ENST00000362694 119 ntBASIC4.41□□□□□ -1.7
USPL1Q5W0Q7 SNORD32A-201ENST00000364805 84 ntBASIC4.41□□□□□ -1.7
USPL1Q5W0Q7 RNU1-100P-201ENST00000365255 165 ntBASIC4.41□□□□□ -1.7
USPL1Q5W0Q7 RNU6-843P-201ENST00000384454 104 ntBASIC4.41□□□□□ -1.7
USPL1Q5W0Q7 SNORD116-20-201ENST00000384529 92 ntBASIC4.41□□□□□ -1.7
USPL1Q5W0Q7 RPL23AP48-201ENST00000406913 488 ntBASIC4.41□□□□□ -1.7
USPL1Q5W0Q7 PIGPP3-201ENST00000425307 415 ntBASIC4.41□□□□□ -1.7
USPL1Q5W0Q7 RPS15AP7-201ENST00000439294 405 ntBASIC4.41□□□□□ -1.7
USPL1Q5W0Q7 AL031659.1-201ENST00000447075 539 ntBASIC4.41□□□□□ -1.7
USPL1Q5W0Q7 AL139109.1-201ENST00000455491 297 ntBASIC4.41□□□□□ -1.7
USPL1Q5W0Q7 SNRPGP5-201ENST00000456003 220 ntBASIC4.41□□□□□ -1.7
USPL1Q5W0Q7 RN7SKP83-201ENST00000516512 178 ntBASIC4.41□□□□□ -1.7
USPL1Q5W0Q7 RNU6-1198P-201ENST00000516904 67 ntBASIC4.41□□□□□ -1.7
USPL1Q5W0Q7 RN7SKP272-201ENST00000516988 232 ntBASIC4.41□□□□□ -1.7
USPL1Q5W0Q7 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.41□□□□□ -1.7
USPL1Q5W0Q7 AC020914.4-201ENST00000597690 277 ntBASIC4.41□□□□□ -1.7
USPL1Q5W0Q7 AC019159.1-201ENST00000605094 187 ntBASIC4.41□□□□□ -1.7
USPL1Q5W0Q7 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.41□□□□□ -1.7
USPL1Q5W0Q7 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.41□□□□□ -1.7
USPL1Q5W0Q7 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
USPL1Q5W0Q7 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
USPL1Q5W0Q7 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
USPL1Q5W0Q7 RNU4-90P-201ENST00000362773 141 ntBASIC4.4□□□□□ -1.71
USPL1Q5W0Q7 RNU6-280P-201ENST00000364145 104 ntBASIC4.4□□□□□ -1.71
USPL1Q5W0Q7 MIR32-201ENST00000384965 70 ntBASIC4.4□□□□□ -1.71
USPL1Q5W0Q7 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.4□□□□□ -1.71
USPL1Q5W0Q7 AC074117.2-201ENST00000417130 397 ntBASIC4.4□□□□□ -1.71
USPL1Q5W0Q7 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.4□□□□□ -1.71
USPL1Q5W0Q7 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.4□□□□□ -1.71
USPL1Q5W0Q7 AC087477.1-201ENST00000465747 340 ntBASIC4.4□□□□□ -1.71
USPL1Q5W0Q7 RNU6-496P-201ENST00000516145 99 ntBASIC4.4□□□□□ -1.71
USPL1Q5W0Q7 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.4□□□□□ -1.71
USPL1Q5W0Q7 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.4□□□□□ -1.71
USPL1Q5W0Q7 AC130289.1-201ENST00000577321 73 ntBASIC4.4□□□□□ -1.71
USPL1Q5W0Q7 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.4□□□□□ -1.71
USPL1Q5W0Q7 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
USPL1Q5W0Q7 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.4□□□□□ -1.71
USPL1Q5W0Q7 AL450472.1-202ENST00000637286 180 ntBASIC4.4□□□□□ -1.71
USPL1Q5W0Q7 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.4□□□□□ -1.71
USPL1Q5W0Q7 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
USPL1Q5W0Q7 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
USPL1Q5W0Q7 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
USPL1Q5W0Q7 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
USPL1Q5W0Q7 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.4□□□□□ -1.71
USPL1Q5W0Q7 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
USPL1Q5W0Q7 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
USPL1Q5W0Q7 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.39□□□□□ -1.71
USPL1Q5W0Q7 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
USPL1Q5W0Q7 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
USPL1Q5W0Q7 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
USPL1Q5W0Q7 HAUS6P2-201ENST00000433254 2404 ntBASIC4.39□□□□□ -1.71
USPL1Q5W0Q7 RNU6-1266P-201ENST00000362794 105 ntBASIC4.39□□□□□ -1.71
USPL1Q5W0Q7 SNORD113-8-201ENST00000363497 74 ntBASIC4.39□□□□□ -1.71
USPL1Q5W0Q7 RNU6-884P-201ENST00000363889 107 ntBASIC4.39□□□□□ -1.71
USPL1Q5W0Q7 RNU6-283P-201ENST00000364788 107 ntBASIC4.39□□□□□ -1.71
USPL1Q5W0Q7 RNU6-290P-201ENST00000365212 101 ntBASIC4.39□□□□□ -1.71
USPL1Q5W0Q7 Y_RNA.541-201ENST00000384640 113 ntBASIC4.39□□□□□ -1.71
USPL1Q5W0Q7 RNU2-14P-201ENST00000411053 191 ntBASIC4.39□□□□□ -1.71
USPL1Q5W0Q7 AL138752.1-201ENST00000452964 351 ntBASIC4.39□□□□□ -1.71
USPL1Q5W0Q7 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.39□□□□□ -1.71
USPL1Q5W0Q7 KLKP1-201ENST00000595979 403 ntBASIC4.39□□□□□ -1.71
USPL1Q5W0Q7 AC010900.2-201ENST00000604508 210 ntBASIC4.39□□□□□ -1.71
USPL1Q5W0Q7 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.39□□□□□ -1.71
USPL1Q5W0Q7 FTX_2.1-201ENST00000618816 94 ntBASIC4.39□□□□□ -1.71
USPL1Q5W0Q7 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
USPL1Q5W0Q7 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.39□□□□□ -1.71
USPL1Q5W0Q7 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
USPL1Q5W0Q7 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
USPL1Q5W0Q7 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
USPL1Q5W0Q7 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.38□□□□□ -1.71
USPL1Q5W0Q7 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
USPL1Q5W0Q7 HSPA8P1-201ENST00000425843 1833 ntBASIC4.38□□□□□ -1.71
USPL1Q5W0Q7 RNU6-222P-201ENST00000362438 107 ntBASIC4.38□□□□□ -1.71
USPL1Q5W0Q7 RNU5B-2P-201ENST00000363036 113 ntBASIC4.38□□□□□ -1.71
USPL1Q5W0Q7 RNA5SP42-201ENST00000364278 115 ntBASIC4.38□□□□□ -1.71
USPL1Q5W0Q7 SNORA29-201ENST00000384183 140 ntBASIC4.38□□□□□ -1.71
USPL1Q5W0Q7 Y_RNA.500-201ENST00000384466 111 ntBASIC4.38□□□□□ -1.71
USPL1Q5W0Q7 RNU6-1035P-201ENST00000384477 107 ntBASIC4.38□□□□□ -1.71
USPL1Q5W0Q7 RNA5SP213-201ENST00000391031 106 ntBASIC4.38□□□□□ -1.71
USPL1Q5W0Q7 AL033519.2-201ENST00000403958 392 ntBASIC4.38□□□□□ -1.71
USPL1Q5W0Q7 AC007969.2-201ENST00000441891 191 ntBASIC4.38□□□□□ -1.71
USPL1Q5W0Q7 UBE2DNL-203ENST00000474922 222 ntBASIC4.38□□□□□ -1.71
USPL1Q5W0Q7 MED28P2-201ENST00000475771 317 ntBASIC4.38□□□□□ -1.71
USPL1Q5W0Q7 AF186996.7-201ENST00000492781 209 ntBASIC4.38□□□□□ -1.71
USPL1Q5W0Q7 SERF1AP1-201ENST00000514575 187 ntBASIC4.38□□□□□ -1.71
USPL1Q5W0Q7 AC011602.1-201ENST00000546484 331 ntBASIC4.38□□□□□ -1.71
USPL1Q5W0Q7 AC023824.2-201ENST00000566185 400 ntBASIC4.38□□□□□ -1.71
USPL1Q5W0Q7 MIR5571-201ENST00000577998 113 ntBASIC4.38□□□□□ -1.71
USPL1Q5W0Q7 MIR5004-201ENST00000579078 107 ntBASIC4.38□□□□□ -1.71
USPL1Q5W0Q7 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.38□□□□□ -1.71
USPL1Q5W0Q7 AL138963.2-201ENST00000605137 226 ntBASIC4.38□□□□□ -1.71
USPL1Q5W0Q7 U2.14-201ENST00000615943 113 ntBASIC4.38□□□□□ -1.71
USPL1Q5W0Q7 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.38□□□□□ -1.71
USPL1Q5W0Q7 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
USPL1Q5W0Q7 AL672296.1-201ENST00000427780 2158 ntBASIC4.38□□□□□ -1.71
USPL1Q5W0Q7 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
USPL1Q5W0Q7 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
USPL1Q5W0Q7 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms