Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 AC018926.1-201ENST00000616335 435 ntBASIC0.07□□□□□ -2.4
NUP188Q5SRE5 RNU6-349P-201ENST00000362402 107 ntBASIC0.06□□□□□ -2.4
NUP188Q5SRE5 RNU6-23P-201ENST00000363283 107 ntBASIC0.06□□□□□ -2.4
NUP188Q5SRE5 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.06□□□□□ -2.4
NUP188Q5SRE5 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.06□□□□□ -2.4
NUP188Q5SRE5 SNORD79.1-201ENST00000516069 84 ntBASIC0.06□□□□□ -2.4
NUP188Q5SRE5 RN7SKP256-201ENST00000517201 314 ntBASIC0.06□□□□□ -2.4
NUP188Q5SRE5 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.06□□□□□ -2.4
NUP188Q5SRE5 LARP7P2-201ENST00000575306 125 ntBASIC0.06□□□□□ -2.4
NUP188Q5SRE5 BNIP3P31-201ENST00000604515 566 ntBASIC0.06□□□□□ -2.4
NUP188Q5SRE5 AL353765.1-201ENST00000605514 183 ntBASIC0.06□□□□□ -2.4
NUP188Q5SRE5 AP001596.2-201ENST00000608410 312 ntBASIC0.06□□□□□ -2.4
NUP188Q5SRE5 AC017083.3-201ENST00000609955 700 ntBASIC0.06□□□□□ -2.4
NUP188Q5SRE5 AC106858.1-201ENST00000637497 429 ntBASIC0.06□□□□□ -2.4
NUP188Q5SRE5 SNORD114-16-201ENST00000363044 70 ntBASIC0.05□□□□□ -2.4
NUP188Q5SRE5 SNORD114-31-201ENST00000363219 75 ntBASIC0.05□□□□□ -2.4
NUP188Q5SRE5 RNU6-1019P-201ENST00000364424 107 ntBASIC0.05□□□□□ -2.4
NUP188Q5SRE5 RNU6-891P-201ENST00000384280 111 ntBASIC0.05□□□□□ -2.4
NUP188Q5SRE5 RNU6-1176P-201ENST00000390955 107 ntBASIC0.05□□□□□ -2.4
NUP188Q5SRE5 TMSB4XP8-201ENST00000402089 135 ntBASIC0.05□□□□□ -2.4
NUP188Q5SRE5 RNA5SP266-201ENST00000410273 108 ntBASIC0.05□□□□□ -2.4
NUP188Q5SRE5 TMSB4XP6-201ENST00000415187 135 ntBASIC0.05□□□□□ -2.4
NUP188Q5SRE5 TMSB4XP1-201ENST00000424567 135 ntBASIC0.05□□□□□ -2.4
NUP188Q5SRE5 GPM6BP2-201ENST00000432046 144 ntBASIC0.05□□□□□ -2.4
NUP188Q5SRE5 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.05□□□□□ -2.4
NUP188Q5SRE5 RPL37P21-201ENST00000435890 276 ntBASIC0.05□□□□□ -2.4
NUP188Q5SRE5 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.05□□□□□ -2.4
NUP188Q5SRE5 GPM6BP1-201ENST00000446387 144 ntBASIC0.05□□□□□ -2.4
NUP188Q5SRE5 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.05□□□□□ -2.4
NUP188Q5SRE5 RNU6-390P-201ENST00000516259 103 ntBASIC0.05□□□□□ -2.4
NUP188Q5SRE5 SUMO2P16-201ENST00000519475 264 ntBASIC0.05□□□□□ -2.4
NUP188Q5SRE5 AC137800.2-201ENST00000574375 120 ntBASIC0.05□□□□□ -2.4
NUP188Q5SRE5 AC025627.3-201ENST00000582078 182 ntBASIC0.05□□□□□ -2.4
NUP188Q5SRE5 AC105148.1-201ENST00000604961 409 ntBASIC0.05□□□□□ -2.4
NUP188Q5SRE5 AC040896.1-201ENST00000613819 479 ntBASIC0.05□□□□□ -2.4
NUP188Q5SRE5 AC080188.3-201ENST00000624842 748 ntBASIC0.05□□□□□ -2.4
NUP188Q5SRE5 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.05□□□□□ -2.4
NUP188Q5SRE5 LINC02555-201ENST00000563933 1951 ntBASIC0.05□□□□□ -2.4
NUP188Q5SRE5 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.05□□□□□ -2.4
NUP188Q5SRE5 U3.9-201ENST00000363823 204 ntBASIC0.04□□□□□ -2.4
NUP188Q5SRE5 Y_RNA.552-201ENST00000384665 112 ntBASIC0.04□□□□□ -2.4
NUP188Q5SRE5 MIR604-201ENST00000384880 94 ntBASIC0.04□□□□□ -2.4
NUP188Q5SRE5 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
NUP188Q5SRE5 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.04□□□□□ -2.4
NUP188Q5SRE5 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.04□□□□□ -2.4
NUP188Q5SRE5 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.04□□□□□ -2.4
NUP188Q5SRE5 AC092170.1-201ENST00000440211 356 ntBASIC0.04□□□□□ -2.4
NUP188Q5SRE5 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.04□□□□□ -2.4
NUP188Q5SRE5 AL050341.1-201ENST00000447743 313 ntBASIC0.04□□□□□ -2.4
NUP188Q5SRE5 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.04□□□□□ -2.4
NUP188Q5SRE5 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.04□□□□□ -2.4
NUP188Q5SRE5 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.04□□□□□ -2.4
NUP188Q5SRE5 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.04□□□□□ -2.4
NUP188Q5SRE5 AC093519.1-201ENST00000566109 298 ntBASIC0.04□□□□□ -2.4
NUP188Q5SRE5 MIR4782-201ENST00000577987 79 ntBASIC0.04□□□□□ -2.4
NUP188Q5SRE5 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC0.04□□□□□ -2.4
NUP188Q5SRE5 AL360219.1-201ENST00000610230 366 ntBASIC0.04□□□□□ -2.4
NUP188Q5SRE5 SGO1P1-201ENST00000603525 1447 ntBASIC0.04□□□□□ -2.4
NUP188Q5SRE5 RNA5SP111-201ENST00000411386 101 ntBASIC0.04□□□□□ -2.4
NUP188Q5SRE5 MTND1P21-201ENST00000412991 285 ntBASIC0.04□□□□□ -2.4
NUP188Q5SRE5 RPS3AP1-201ENST00000413190 320 ntBASIC0.04□□□□□ -2.4
NUP188Q5SRE5 AL031313.1-201ENST00000448435 256 ntBASIC0.04□□□□□ -2.4
NUP188Q5SRE5 RPS26P45-201ENST00000471748 340 ntBASIC0.04□□□□□ -2.4
NUP188Q5SRE5 AC022493.2-201ENST00000506122 481 ntBASIC0.04□□□□□ -2.4
NUP188Q5SRE5 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.04□□□□□ -2.4
NUP188Q5SRE5 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.04□□□□□ -2.4
NUP188Q5SRE5 RNU6-1183P-201ENST00000517054 60 ntBASIC0.04□□□□□ -2.4
NUP188Q5SRE5 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.04□□□□□ -2.4
NUP188Q5SRE5 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC0.04□□□□□ -2.4
NUP188Q5SRE5 Z98751.3-201ENST00000604447 521 ntBASIC0.04□□□□□ -2.4
NUP188Q5SRE5 AC092106.3-201ENST00000611308 722 ntBASIC0.04□□□□□ -2.4
NUP188Q5SRE5 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
NUP188Q5SRE5 RNU6-223P-201ENST00000362830 107 ntBASIC0.03□□□□□ -2.4
NUP188Q5SRE5 RNU6-1210P-201ENST00000363775 107 ntBASIC0.03□□□□□ -2.4
NUP188Q5SRE5 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
NUP188Q5SRE5 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
NUP188Q5SRE5 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC0.03□□□□□ -2.4
NUP188Q5SRE5 OR6C5P-201ENST00000452388 923 ntBASIC0.03□□□□□ -2.4
NUP188Q5SRE5 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.03□□□□□ -2.4
NUP188Q5SRE5 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.03□□□□□ -2.4
NUP188Q5SRE5 AL356057.1-201ENST00000533798 831 ntBASIC0.03□□□□□ -2.4
NUP188Q5SRE5 AC018630.3-201ENST00000542637 96 ntBASIC0.03□□□□□ -2.4
NUP188Q5SRE5 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.03□□□□□ -2.4
NUP188Q5SRE5 AC007363.1-201ENST00000604736 620 ntBASIC0.03□□□□□ -2.4
NUP188Q5SRE5 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.03□□□□□ -2.4
NUP188Q5SRE5 MIR1248-201ENST00000629190 106 ntBASIC0.03□□□□□ -2.4
NUP188Q5SRE5 AC010615.1-201ENST00000594254 1764 ntBASIC0.03□□□□□ -2.41
NUP188Q5SRE5 Y_RNA.124-201ENST00000363339 93 ntBASIC0.02□□□□□ -2.41
NUP188Q5SRE5 RNU6-898P-201ENST00000365627 104 ntBASIC0.02□□□□□ -2.41
NUP188Q5SRE5 RNU6-39P-201ENST00000384344 107 ntBASIC0.02□□□□□ -2.41
NUP188Q5SRE5 TRIM60P5Y-201ENST00000413946 574 ntBASIC0.02□□□□□ -2.41
NUP188Q5SRE5 RAB28P5-201ENST00000427490 651 ntBASIC0.02□□□□□ -2.41
NUP188Q5SRE5 RPS29P8-201ENST00000445109 171 ntBASIC0.02□□□□□ -2.41
NUP188Q5SRE5 AC233266.1-201ENST00000454518 96 ntBASIC0.02□□□□□ -2.41
NUP188Q5SRE5 snoU13.27-201ENST00000459278 104 ntBASIC0.02□□□□□ -2.41
NUP188Q5SRE5 AC011005.2-201ENST00000487324 359 ntBASIC0.02□□□□□ -2.41
NUP188Q5SRE5 AC024589.1-201ENST00000512207 263 ntBASIC0.02□□□□□ -2.41
NUP188Q5SRE5 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.02□□□□□ -2.41
NUP188Q5SRE5 AL442163.3-201ENST00000554110 156 ntBASIC0.02□□□□□ -2.41
NUP188Q5SRE5 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms