Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 MTCO3P29-201ENST00000432119 779 ntBASIC3.44□□□□□ -1.86
ATP13A4Q4VNC1 GPM6BP3-201ENST00000442797 145 ntBASIC3.44□□□□□ -1.86
ATP13A4Q4VNC1 SCARNA20.6-201ENST00000517251 106 ntBASIC3.44□□□□□ -1.86
ATP13A4Q4VNC1 AC115990.1-201ENST00000526957 301 ntBASIC3.44□□□□□ -1.86
ATP13A4Q4VNC1 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.44□□□□□ -1.86
ATP13A4Q4VNC1 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.44□□□□□ -1.86
ATP13A4Q4VNC1 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.44□□□□□ -1.86
ATP13A4Q4VNC1 MIR5571-201ENST00000577998 113 ntBASIC3.44□□□□□ -1.86
ATP13A4Q4VNC1 MIR4680-201ENST00000580906 66 ntBASIC3.44□□□□□ -1.86
ATP13A4Q4VNC1 RPL23AP88-201ENST00000605759 454 ntBASIC3.44□□□□□ -1.86
ATP13A4Q4VNC1 uc_338.1-201ENST00000612113 180 ntBASIC3.44□□□□□ -1.86
ATP13A4Q4VNC1 AL606534.2-204ENST00000635008 178 ntBASIC3.44□□□□□ -1.86
ATP13A4Q4VNC1 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
ATP13A4Q4VNC1 AP000560.1-201ENST00000624150 1937 ntBASIC3.44□□□□□ -1.86
ATP13A4Q4VNC1 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.44□□□□□ -1.86
ATP13A4Q4VNC1 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.44□□□□□ -1.86
ATP13A4Q4VNC1 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.44□□□□□ -1.86
ATP13A4Q4VNC1 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
ATP13A4Q4VNC1 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.43□□□□□ -1.86
ATP13A4Q4VNC1 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.43□□□□□ -1.86
ATP13A4Q4VNC1 SNORD114-19-201ENST00000363072 75 ntBASIC3.43□□□□□ -1.86
ATP13A4Q4VNC1 Y_RNA.145-201ENST00000363527 102 ntBASIC3.43□□□□□ -1.86
ATP13A4Q4VNC1 RNU4-42P-201ENST00000364738 142 ntBASIC3.43□□□□□ -1.86
ATP13A4Q4VNC1 Y_RNA.405-201ENST00000383979 100 ntBASIC3.43□□□□□ -1.86
ATP13A4Q4VNC1 Y_RNA.451-201ENST00000384200 100 ntBASIC3.43□□□□□ -1.86
ATP13A4Q4VNC1 Y_RNA.524-201ENST00000384564 100 ntBASIC3.43□□□□□ -1.86
ATP13A4Q4VNC1 Y_RNA.561-201ENST00000384694 100 ntBASIC3.43□□□□□ -1.86
ATP13A4Q4VNC1 TRIAP1P1-201ENST00000427062 225 ntBASIC3.43□□□□□ -1.86
ATP13A4Q4VNC1 YME1L1P1-201ENST00000429435 297 ntBASIC3.43□□□□□ -1.86
ATP13A4Q4VNC1 AC008155.2-201ENST00000464337 397 ntBASIC3.43□□□□□ -1.86
ATP13A4Q4VNC1 RAC1P5-201ENST00000512182 576 ntBASIC3.43□□□□□ -1.86
ATP13A4Q4VNC1 RNU1-143P-201ENST00000516296 146 ntBASIC3.43□□□□□ -1.86
ATP13A4Q4VNC1 AC144568.1-201ENST00000520139 137 ntBASIC3.43□□□□□ -1.86
ATP13A4Q4VNC1 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.43□□□□□ -1.86
ATP13A4Q4VNC1 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.43□□□□□ -1.86
ATP13A4Q4VNC1 U3.45-201ENST00000607547 219 ntBASIC3.43□□□□□ -1.86
ATP13A4Q4VNC1 AC100812.1-201ENST00000607622 580 ntBASIC3.43□□□□□ -1.86
ATP13A4Q4VNC1 AC069200.1-201ENST00000609511 323 ntBASIC3.43□□□□□ -1.86
ATP13A4Q4VNC1 U1.23-201ENST00000610293 146 ntBASIC3.43□□□□□ -1.86
ATP13A4Q4VNC1 AC019176.2-201ENST00000611579 315 ntBASIC3.43□□□□□ -1.86
ATP13A4Q4VNC1 AL359198.2-201ENST00000611836 194 ntBASIC3.43□□□□□ -1.86
ATP13A4Q4VNC1 RNU1-68P-201ENST00000615382 146 ntBASIC3.43□□□□□ -1.86
ATP13A4Q4VNC1 AL159153.1-201ENST00000619688 317 ntBASIC3.43□□□□□ -1.86
ATP13A4Q4VNC1 UCA1.1-201ENST00000620952 75 ntBASIC3.43□□□□□ -1.86
ATP13A4Q4VNC1 U1.39-201ENST00000621562 146 ntBASIC3.43□□□□□ -1.86
ATP13A4Q4VNC1 AC002064.3-201ENST00000623448 346 ntBASIC3.43□□□□□ -1.86
ATP13A4Q4VNC1 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.43□□□□□ -1.86
ATP13A4Q4VNC1 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.43□□□□□ -1.86
ATP13A4Q4VNC1 AC005592.1-201ENST00000566527 1640 ntBASIC3.43□□□□□ -1.86
ATP13A4Q4VNC1 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
ATP13A4Q4VNC1 AL353743.1-202ENST00000431724 1695 ntBASIC3.43□□□□□ -1.86
ATP13A4Q4VNC1 ZNF826P-207ENST00000622273 1910 ntBASIC3.42□□□□□ -1.86
ATP13A4Q4VNC1 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
ATP13A4Q4VNC1 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.42□□□□□ -1.86
ATP13A4Q4VNC1 SNORA63.1-201ENST00000362493 131 ntBASIC3.42□□□□□ -1.86
ATP13A4Q4VNC1 MIR190B-201ENST00000401119 79 ntBASIC3.42□□□□□ -1.86
ATP13A4Q4VNC1 CYCSP48-201ENST00000417124 323 ntBASIC3.42□□□□□ -1.86
ATP13A4Q4VNC1 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.42□□□□□ -1.86
ATP13A4Q4VNC1 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.42□□□□□ -1.86
ATP13A4Q4VNC1 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.42□□□□□ -1.86
ATP13A4Q4VNC1 Z82188.1-201ENST00000436709 154 ntBASIC3.42□□□□□ -1.86
ATP13A4Q4VNC1 AC009296.1-201ENST00000443146 155 ntBASIC3.42□□□□□ -1.86
ATP13A4Q4VNC1 AC006539.3-201ENST00000454258 129 ntBASIC3.42□□□□□ -1.86
ATP13A4Q4VNC1 AL353752.1-201ENST00000454946 260 ntBASIC3.42□□□□□ -1.86
ATP13A4Q4VNC1 snoU13.30-201ENST00000458951 104 ntBASIC3.42□□□□□ -1.86
ATP13A4Q4VNC1 AF186996.7-201ENST00000492781 209 ntBASIC3.42□□□□□ -1.86
ATP13A4Q4VNC1 RNU6-475P-201ENST00000516073 104 ntBASIC3.42□□□□□ -1.86
ATP13A4Q4VNC1 AC093331.1-201ENST00000521474 169 ntBASIC3.42□□□□□ -1.86
ATP13A4Q4VNC1 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.42□□□□□ -1.86
ATP13A4Q4VNC1 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ATP13A4Q4VNC1 AC021231.3-201ENST00000558497 370 ntBASIC3.42□□□□□ -1.86
ATP13A4Q4VNC1 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.42□□□□□ -1.86
ATP13A4Q4VNC1 MIR3944-201ENST00000581277 108 ntBASIC3.42□□□□□ -1.86
ATP13A4Q4VNC1 AC010928.2-201ENST00000588017 287 ntBASIC3.42□□□□□ -1.86
ATP13A4Q4VNC1 AL137843.1-201ENST00000605078 385 ntBASIC3.42□□□□□ -1.86
ATP13A4Q4VNC1 SNORD58B-201ENST00000607313 66 ntBASIC3.42□□□□□ -1.86
ATP13A4Q4VNC1 AC087588.2-201ENST00000617667 426 ntBASIC3.42□□□□□ -1.86
ATP13A4Q4VNC1 AL138825.1-201ENST00000618587 192 ntBASIC3.42□□□□□ -1.86
ATP13A4Q4VNC1 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.42□□□□□ -1.86
ATP13A4Q4VNC1 MIR4272-201ENST00000635924 64 ntBASIC3.42□□□□□ -1.86
ATP13A4Q4VNC1 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.42□□□□□ -1.86
ATP13A4Q4VNC1 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.42□□□□□ -1.86
ATP13A4Q4VNC1 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ATP13A4Q4VNC1 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ATP13A4Q4VNC1 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ATP13A4Q4VNC1 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
ATP13A4Q4VNC1 RNU5B-2P-201ENST00000363036 113 ntBASIC3.41□□□□□ -1.86
ATP13A4Q4VNC1 U3.13-201ENST00000364804 214 ntBASIC3.41□□□□□ -1.86
ATP13A4Q4VNC1 SNORA26.3-201ENST00000391119 136 ntBASIC3.41□□□□□ -1.86
ATP13A4Q4VNC1 Y_RNA.605-201ENST00000410577 105 ntBASIC3.41□□□□□ -1.86
ATP13A4Q4VNC1 RNA5SP229-201ENST00000410809 99 ntBASIC3.41□□□□□ -1.86
ATP13A4Q4VNC1 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.41□□□□□ -1.86
ATP13A4Q4VNC1 CST9LP2-201ENST00000437612 320 ntBASIC3.41□□□□□ -1.86
ATP13A4Q4VNC1 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.41□□□□□ -1.86
ATP13A4Q4VNC1 RN7SL601P-201ENST00000471221 293 ntBASIC3.41□□□□□ -1.86
ATP13A4Q4VNC1 AC006445.1-201ENST00000491925 405 ntBASIC3.41□□□□□ -1.86
ATP13A4Q4VNC1 AC015911.1-201ENST00000495111 156 ntBASIC3.41□□□□□ -1.86
ATP13A4Q4VNC1 AC021146.2-201ENST00000504736 556 ntBASIC3.41□□□□□ -1.86
ATP13A4Q4VNC1 SNORA64.4-201ENST00000516632 81 ntBASIC3.41□□□□□ -1.86
ATP13A4Q4VNC1 Y_RNA.706-201ENST00000516933 99 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms