Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 FO393413.1-201ENST00000402892 195 ntBASIC2.69□□□□□ -1.98
USP41Q3LFD5 MIR1261-201ENST00000408659 82 ntBASIC2.69□□□□□ -1.98
USP41Q3LFD5 RNU6-1245P-201ENST00000411130 106 ntBASIC2.69□□□□□ -1.98
USP41Q3LFD5 AC138623.1-201ENST00000418060 216 ntBASIC2.69□□□□□ -1.98
USP41Q3LFD5 MTCO3P46-201ENST00000425787 232 ntBASIC2.69□□□□□ -1.98
USP41Q3LFD5 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.69□□□□□ -1.98
USP41Q3LFD5 CR769767.1-201ENST00000436337 346 ntBASIC2.69□□□□□ -1.98
USP41Q3LFD5 SNORA25.11-201ENST00000515935 105 ntBASIC2.69□□□□□ -1.98
USP41Q3LFD5 RNU1-41P-201ENST00000516161 162 ntBASIC2.69□□□□□ -1.98
USP41Q3LFD5 RNU1-48P-201ENST00000516400 162 ntBASIC2.69□□□□□ -1.98
USP41Q3LFD5 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.69□□□□□ -1.98
USP41Q3LFD5 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.69□□□□□ -1.98
USP41Q3LFD5 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.69□□□□□ -1.98
USP41Q3LFD5 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.69□□□□□ -1.98
USP41Q3LFD5 AC100830.2-201ENST00000581636 240 ntBASIC2.69□□□□□ -1.98
USP41Q3LFD5 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.69□□□□□ -1.98
USP41Q3LFD5 uc_338.14-201ENST00000613162 166 ntBASIC2.69□□□□□ -1.98
USP41Q3LFD5 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.69□□□□□ -1.98
USP41Q3LFD5 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
USP41Q3LFD5 AC026241.1-201ENST00000517873 2142 ntBASIC2.69□□□□□ -1.98
USP41Q3LFD5 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.69□□□□□ -1.98
USP41Q3LFD5 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.69□□□□□ -1.98
USP41Q3LFD5 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.68□□□□□ -1.98
USP41Q3LFD5 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
USP41Q3LFD5 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.68□□□□□ -1.98
USP41Q3LFD5 RNU6-562P-201ENST00000362731 107 ntBASIC2.68□□□□□ -1.98
USP41Q3LFD5 Y_RNA.212-201ENST00000364177 102 ntBASIC2.68□□□□□ -1.98
USP41Q3LFD5 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
USP41Q3LFD5 AL513475.1-201ENST00000406602 315 ntBASIC2.68□□□□□ -1.98
USP41Q3LFD5 RNU6-1140P-201ENST00000410517 106 ntBASIC2.68□□□□□ -1.98
USP41Q3LFD5 RNU6-293P-201ENST00000411259 106 ntBASIC2.68□□□□□ -1.98
USP41Q3LFD5 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.68□□□□□ -1.98
USP41Q3LFD5 RPS15AP10-201ENST00000432472 382 ntBASIC2.68□□□□□ -1.98
USP41Q3LFD5 FABP5P14-201ENST00000437273 393 ntBASIC2.68□□□□□ -1.98
USP41Q3LFD5 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
USP41Q3LFD5 MTATP6P23-201ENST00000440153 476 ntBASIC2.68□□□□□ -1.98
USP41Q3LFD5 MTND4P18-201ENST00000447010 465 ntBASIC2.68□□□□□ -1.98
USP41Q3LFD5 AC013470.1-201ENST00000453438 462 ntBASIC2.68□□□□□ -1.98
USP41Q3LFD5 AMD1P1-201ENST00000457220 922 ntBASIC2.68□□□□□ -1.98
USP41Q3LFD5 AC133134.1-201ENST00000466800 359 ntBASIC2.68□□□□□ -1.98
USP41Q3LFD5 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.68□□□□□ -1.98
USP41Q3LFD5 HMGN1P12-201ENST00000499125 195 ntBASIC2.68□□□□□ -1.98
USP41Q3LFD5 AIG1P1-201ENST00000503376 148 ntBASIC2.68□□□□□ -1.98
USP41Q3LFD5 AC096745.1-201ENST00000509945 370 ntBASIC2.68□□□□□ -1.98
USP41Q3LFD5 RPL39P5-202ENST00000512505 151 ntBASIC2.68□□□□□ -1.98
USP41Q3LFD5 AC008549.1-201ENST00000512900 643 ntBASIC2.68□□□□□ -1.98
USP41Q3LFD5 AC046134.1-201ENST00000514454 666 ntBASIC2.68□□□□□ -1.98
USP41Q3LFD5 RNU5B-3P-201ENST00000516601 115 ntBASIC2.68□□□□□ -1.98
USP41Q3LFD5 RNU7-30P-201ENST00000516835 62 ntBASIC2.68□□□□□ -1.98
USP41Q3LFD5 RNU6-1088P-201ENST00000516850 104 ntBASIC2.68□□□□□ -1.98
USP41Q3LFD5 SCARNA11.3-201ENST00000517276 130 ntBASIC2.68□□□□□ -1.98
USP41Q3LFD5 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.68□□□□□ -1.98
USP41Q3LFD5 AC005668.1-201ENST00000571142 476 ntBASIC2.68□□□□□ -1.98
USP41Q3LFD5 MIR4765-201ENST00000585007 77 ntBASIC2.68□□□□□ -1.98
USP41Q3LFD5 AC104984.5-201ENST00000586878 94 ntBASIC2.68□□□□□ -1.98
USP41Q3LFD5 AC009314.1-201ENST00000603871 304 ntBASIC2.68□□□□□ -1.98
USP41Q3LFD5 AC244517.12-201ENST00000623581 663 ntBASIC2.68□□□□□ -1.98
USP41Q3LFD5 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
USP41Q3LFD5 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.68□□□□□ -1.98
USP41Q3LFD5 RNA5SP289-201ENST00000362332 137 ntBASIC2.67□□□□□ -1.98
USP41Q3LFD5 Y_RNA.301-201ENST00000364990 103 ntBASIC2.67□□□□□ -1.98
USP41Q3LFD5 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
USP41Q3LFD5 DEFA7P-201ENST00000382676 285 ntBASIC2.67□□□□□ -1.98
USP41Q3LFD5 AL590632.1-201ENST00000424289 371 ntBASIC2.67□□□□□ -1.98
USP41Q3LFD5 UBE2V1P4-201ENST00000425374 344 ntBASIC2.67□□□□□ -1.98
USP41Q3LFD5 MTCO2P3-201ENST00000442543 421 ntBASIC2.67□□□□□ -1.98
USP41Q3LFD5 AC124916.1-201ENST00000444020 547 ntBASIC2.67□□□□□ -1.98
USP41Q3LFD5 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.67□□□□□ -1.98
USP41Q3LFD5 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.67□□□□□ -1.98
USP41Q3LFD5 RNU6-1037P-201ENST00000459571 107 ntBASIC2.67□□□□□ -1.98
USP41Q3LFD5 AC112771.1-201ENST00000463581 102 ntBASIC2.67□□□□□ -1.98
USP41Q3LFD5 RPL36AP48-201ENST00000485521 314 ntBASIC2.67□□□□□ -1.98
USP41Q3LFD5 RPS27P27-201ENST00000498779 255 ntBASIC2.67□□□□□ -1.98
USP41Q3LFD5 AC008526.1-201ENST00000509149 338 ntBASIC2.67□□□□□ -1.98
USP41Q3LFD5 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.67□□□□□ -1.98
USP41Q3LFD5 AC023043.2-201ENST00000589678 1026 ntBASIC2.67□□□□□ -1.98
USP41Q3LFD5 AC022306.2-201ENST00000617563 647 ntBASIC2.67□□□□□ -1.98
USP41Q3LFD5 AL133216.2-202ENST00000634512 349 ntBASIC2.67□□□□□ -1.98
USP41Q3LFD5 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.67□□□□□ -1.98
USP41Q3LFD5 AL109809.4-201ENST00000603520 2185 ntBASIC2.67□□□□□ -1.98
USP41Q3LFD5 HAUS6P2-201ENST00000433254 2404 ntBASIC2.67□□□□□ -1.98
USP41Q3LFD5 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.66□□□□□ -1.98
USP41Q3LFD5 SNORD116-11-201ENST00000383882 92 ntBASIC2.66□□□□□ -1.98
USP41Q3LFD5 MIR627-201ENST00000384979 97 ntBASIC2.66□□□□□ -1.98
USP41Q3LFD5 AL359511.1-201ENST00000402970 211 ntBASIC2.66□□□□□ -1.98
USP41Q3LFD5 SNORA3.2-201ENST00000408221 125 ntBASIC2.66□□□□□ -1.98
USP41Q3LFD5 RN7SKP32-201ENST00000410167 303 ntBASIC2.66□□□□□ -1.98
USP41Q3LFD5 RNU4-53P-201ENST00000410828 140 ntBASIC2.66□□□□□ -1.98
USP41Q3LFD5 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.66□□□□□ -1.98
USP41Q3LFD5 AL121890.1-201ENST00000435457 205 ntBASIC2.66□□□□□ -1.98
USP41Q3LFD5 AC104389.3-201ENST00000445629 235 ntBASIC2.66□□□□□ -1.98
USP41Q3LFD5 AL513124.1-201ENST00000450410 614 ntBASIC2.66□□□□□ -1.98
USP41Q3LFD5 AP001025.1-201ENST00000486139 332 ntBASIC2.66□□□□□ -1.98
USP41Q3LFD5 RN7SL636P-201ENST00000497504 294 ntBASIC2.66□□□□□ -1.98
USP41Q3LFD5 ANXA2P1-201ENST00000505539 926 ntBASIC2.66□□□□□ -1.98
USP41Q3LFD5 Y_RNA.682-201ENST00000516457 100 ntBASIC2.66□□□□□ -1.98
USP41Q3LFD5 RNU6-566P-201ENST00000516790 107 ntBASIC2.66□□□□□ -1.98
USP41Q3LFD5 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.66□□□□□ -1.98
USP41Q3LFD5 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.66□□□□□ -1.98
USP41Q3LFD5 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms