Protein–RNA interactions for Protein: Q16610

ECM1, Extracellular matrix protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1Q16610 RNA5SP208-201ENST00000516156 78 ntBASIC4.31□□□□□ -1.72
ECM1Q16610 RNU7-110P-201ENST00000516891 62 ntBASIC4.31□□□□□ -1.72
ECM1Q16610 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.31□□□□□ -1.72
ECM1Q16610 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC4.31□□□□□ -1.72
ECM1Q16610 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC4.31□□□□□ -1.72
ECM1Q16610 AL162713.1-201ENST00000604480 262 ntBASIC4.31□□□□□ -1.72
ECM1Q16610 AC011921.3-201ENST00000605540 361 ntBASIC4.31□□□□□ -1.72
ECM1Q16610 AL354798.1-201ENST00000622505 329 ntBASIC4.31□□□□□ -1.72
ECM1Q16610 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ECM1Q16610 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ECM1Q16610 IPO8P1-201ENST00000455509 3109 ntBASIC4.31□□□□□ -1.72
ECM1Q16610 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ECM1Q16610 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
ECM1Q16610 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
ECM1Q16610 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
ECM1Q16610 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.3□□□□□ -1.72
ECM1Q16610 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
ECM1Q16610 RNU6-1145P-201ENST00000384246 107 ntBASIC4.3□□□□□ -1.72
ECM1Q16610 RNU6-804P-201ENST00000384286 107 ntBASIC4.3□□□□□ -1.72
ECM1Q16610 RN7SKP51-201ENST00000410781 304 ntBASIC4.3□□□□□ -1.72
ECM1Q16610 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.3□□□□□ -1.72
ECM1Q16610 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.3□□□□□ -1.72
ECM1Q16610 AC112220.1-201ENST00000434628 355 ntBASIC4.3□□□□□ -1.72
ECM1Q16610 AC005002.2-201ENST00000438228 269 ntBASIC4.3□□□□□ -1.72
ECM1Q16610 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.3□□□□□ -1.72
ECM1Q16610 AC091021.1-201ENST00000468051 388 ntBASIC4.3□□□□□ -1.72
ECM1Q16610 SCARNA24.2-201ENST00000516968 130 ntBASIC4.3□□□□□ -1.72
ECM1Q16610 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.3□□□□□ -1.72
ECM1Q16610 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.3□□□□□ -1.72
ECM1Q16610 AC027176.1-201ENST00000560204 514 ntBASIC4.3□□□□□ -1.72
ECM1Q16610 AC025281.1-201ENST00000567026 265 ntBASIC4.3□□□□□ -1.72
ECM1Q16610 MIR4286-201ENST00000580651 93 ntBASIC4.3□□□□□ -1.72
ECM1Q16610 Z83818.1-201ENST00000603584 150 ntBASIC4.3□□□□□ -1.72
ECM1Q16610 AC091152.3-201ENST00000604227 325 ntBASIC4.3□□□□□ -1.72
ECM1Q16610 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.3□□□□□ -1.72
ECM1Q16610 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
ECM1Q16610 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ECM1Q16610 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ECM1Q16610 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
ECM1Q16610 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ECM1Q16610 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
ECM1Q16610 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ECM1Q16610 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ECM1Q16610 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
ECM1Q16610 OTUD4P1-201ENST00000237841 3067 ntBASIC4.29□□□□□ -1.72
ECM1Q16610 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
ECM1Q16610 RNU6-1010P-201ENST00000362757 107 ntBASIC4.29□□□□□ -1.72
ECM1Q16610 Y_RNA.76-201ENST00000362931 109 ntBASIC4.29□□□□□ -1.72
ECM1Q16610 RNU6-626P-201ENST00000363354 107 ntBASIC4.29□□□□□ -1.72
ECM1Q16610 RNU6-514P-201ENST00000384208 107 ntBASIC4.29□□□□□ -1.72
ECM1Q16610 U3.39-201ENST00000408569 239 ntBASIC4.29□□□□□ -1.72
ECM1Q16610 MTCO1P5-201ENST00000433573 344 ntBASIC4.29□□□□□ -1.72
ECM1Q16610 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.29□□□□□ -1.72
ECM1Q16610 AC146944.2-203ENST00000502493 354 ntBASIC4.29□□□□□ -1.72
ECM1Q16610 AC020593.1-201ENST00000507399 299 ntBASIC4.29□□□□□ -1.72
ECM1Q16610 AC139495.1-202ENST00000513164 354 ntBASIC4.29□□□□□ -1.72
ECM1Q16610 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.29□□□□□ -1.72
ECM1Q16610 AC074133.1-201ENST00000515696 183 ntBASIC4.29□□□□□ -1.72
ECM1Q16610 RNU2-31P-201ENST00000516954 155 ntBASIC4.29□□□□□ -1.72
ECM1Q16610 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.29□□□□□ -1.72
ECM1Q16610 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.29□□□□□ -1.72
ECM1Q16610 AC022695.1-201ENST00000522089 237 ntBASIC4.29□□□□□ -1.72
ECM1Q16610 AC024220.1-201ENST00000603675 484 ntBASIC4.29□□□□□ -1.72
ECM1Q16610 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.29□□□□□ -1.72
ECM1Q16610 U6.106-201ENST00000636360 105 ntBASIC4.29□□□□□ -1.72
ECM1Q16610 SNORD98-201ENST00000636377 67 ntBASIC4.29□□□□□ -1.72
ECM1Q16610 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ECM1Q16610 AC018555.1-201ENST00000567548 1980 ntBASIC4.29□□□□□ -1.72
ECM1Q16610 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
ECM1Q16610 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.29□□□□□ -1.72
ECM1Q16610 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ECM1Q16610 AC010889.1-201ENST00000566193 2666 ntBASIC4.28□□□□□ -1.72
ECM1Q16610 AC010680.1-201ENST00000590024 3590 ntBASIC4.28□□□□□ -1.72
ECM1Q16610 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ECM1Q16610 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ECM1Q16610 RNU1-105P-201ENST00000363470 161 ntBASIC4.28□□□□□ -1.72
ECM1Q16610 Y_RNA.179-201ENST00000363844 90 ntBASIC4.28□□□□□ -1.72
ECM1Q16610 RNU6-153P-201ENST00000364422 104 ntBASIC4.28□□□□□ -1.72
ECM1Q16610 RNU1-64P-201ENST00000365443 163 ntBASIC4.28□□□□□ -1.72
ECM1Q16610 RNU6-47P-201ENST00000383866 107 ntBASIC4.28□□□□□ -1.72
ECM1Q16610 RNU6-1310P-201ENST00000384153 107 ntBASIC4.28□□□□□ -1.72
ECM1Q16610 Y_RNA.541-201ENST00000384640 113 ntBASIC4.28□□□□□ -1.72
ECM1Q16610 MIR329-1-201ENST00000385028 80 ntBASIC4.28□□□□□ -1.72
ECM1Q16610 AP000567.1-201ENST00000406413 156 ntBASIC4.28□□□□□ -1.72
ECM1Q16610 BMS1P22-201ENST00000414726 313 ntBASIC4.28□□□□□ -1.72
ECM1Q16610 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.28□□□□□ -1.72
ECM1Q16610 AL139247.1-201ENST00000422768 325 ntBASIC4.28□□□□□ -1.72
ECM1Q16610 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.28□□□□□ -1.72
ECM1Q16610 AC073901.1-201ENST00000462471 408 ntBASIC4.28□□□□□ -1.72
ECM1Q16610 AC007215.1-201ENST00000464893 276 ntBASIC4.28□□□□□ -1.72
ECM1Q16610 AC109925.1-201ENST00000478069 331 ntBASIC4.28□□□□□ -1.72
ECM1Q16610 AC090525.1-201ENST00000479116 478 ntBASIC4.28□□□□□ -1.72
ECM1Q16610 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.28□□□□□ -1.72
ECM1Q16610 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.28□□□□□ -1.72
ECM1Q16610 AC106785.1-201ENST00000565935 262 ntBASIC4.28□□□□□ -1.72
ECM1Q16610 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ECM1Q16610 AC087499.8-201ENST00000578406 226 ntBASIC4.28□□□□□ -1.72
ECM1Q16610 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.28□□□□□ -1.72
ECM1Q16610 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.28□□□□□ -1.72
ECM1Q16610 RPS15AP11-201ENST00000594193 385 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms