Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 MIR95-201ENST00000385072 81 ntBASIC1.73□□□□□ -2.13
SMARCB1Q12824 SNORA16.2-201ENST00000390991 127 ntBASIC1.73□□□□□ -2.13
SMARCB1Q12824 UBE2V1P10-201ENST00000414685 269 ntBASIC1.73□□□□□ -2.13
SMARCB1Q12824 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.73□□□□□ -2.13
SMARCB1Q12824 AC108667.1-201ENST00000428618 249 ntBASIC1.73□□□□□ -2.13
SMARCB1Q12824 HMGB1P31-201ENST00000437242 427 ntBASIC1.73□□□□□ -2.13
SMARCB1Q12824 AL360221.1-201ENST00000445989 335 ntBASIC1.73□□□□□ -2.13
SMARCB1Q12824 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.73□□□□□ -2.13
SMARCB1Q12824 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.73□□□□□ -2.13
SMARCB1Q12824 AL441985.1-201ENST00000457727 251 ntBASIC1.73□□□□□ -2.13
SMARCB1Q12824 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.73□□□□□ -2.13
SMARCB1Q12824 AC006512.1-201ENST00000468816 291 ntBASIC1.73□□□□□ -2.13
SMARCB1Q12824 AC018868.1-201ENST00000491307 315 ntBASIC1.73□□□□□ -2.13
SMARCB1Q12824 MTCYBP40-201ENST00000509390 1135 ntBASIC1.73□□□□□ -2.13
SMARCB1Q12824 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.73□□□□□ -2.13
SMARCB1Q12824 RNU6-1178P-201ENST00000516674 107 ntBASIC1.73□□□□□ -2.13
SMARCB1Q12824 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.73□□□□□ -2.13
SMARCB1Q12824 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.73□□□□□ -2.13
SMARCB1Q12824 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.73□□□□□ -2.13
SMARCB1Q12824 AP002963.1-201ENST00000530590 184 ntBASIC1.73□□□□□ -2.13
SMARCB1Q12824 SNORD53B-201ENST00000577887 78 ntBASIC1.73□□□□□ -2.13
SMARCB1Q12824 MIR4299-201ENST00000577899 72 ntBASIC1.73□□□□□ -2.13
SMARCB1Q12824 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.73□□□□□ -2.13
SMARCB1Q12824 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.73□□□□□ -2.13
SMARCB1Q12824 AC008752.3-201ENST00000588113 712 ntBASIC1.73□□□□□ -2.13
SMARCB1Q12824 AC123912.5-201ENST00000605470 343 ntBASIC1.73□□□□□ -2.13
SMARCB1Q12824 AC022202.1-201ENST00000613515 211 ntBASIC1.73□□□□□ -2.13
SMARCB1Q12824 SEPT14P19-203ENST00000633205 211 ntBASIC1.73□□□□□ -2.13
SMARCB1Q12824 U6.114-201ENST00000636407 96 ntBASIC1.73□□□□□ -2.13
SMARCB1Q12824 ZNF680P1-201ENST00000436625 1469 ntBASIC1.73□□□□□ -2.13
SMARCB1Q12824 Y_RNA.140-201ENST00000363474 103 ntBASIC1.72□□□□□ -2.13
SMARCB1Q12824 RNU6-457P-201ENST00000363999 107 ntBASIC1.72□□□□□ -2.13
SMARCB1Q12824 RNU4-42P-201ENST00000364738 142 ntBASIC1.72□□□□□ -2.13
SMARCB1Q12824 Y_RNA.381-201ENST00000365666 102 ntBASIC1.72□□□□□ -2.13
SMARCB1Q12824 RNU1-57P-201ENST00000384491 166 ntBASIC1.72□□□□□ -2.13
SMARCB1Q12824 RNU6-1127P-201ENST00000384580 107 ntBASIC1.72□□□□□ -2.13
SMARCB1Q12824 RNU6-606P-201ENST00000384721 111 ntBASIC1.72□□□□□ -2.13
SMARCB1Q12824 DEFB108C-201ENST00000400154 252 ntBASIC1.72□□□□□ -2.13
SMARCB1Q12824 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.72□□□□□ -2.13
SMARCB1Q12824 EDDM3CP-201ENST00000415977 425 ntBASIC1.72□□□□□ -2.13
SMARCB1Q12824 AC074117.2-201ENST00000417130 397 ntBASIC1.72□□□□□ -2.13
SMARCB1Q12824 AL353193.1-201ENST00000421444 268 ntBASIC1.72□□□□□ -2.13
SMARCB1Q12824 RPL23AP3-201ENST00000453844 468 ntBASIC1.72□□□□□ -2.13
SMARCB1Q12824 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.72□□□□□ -2.13
SMARCB1Q12824 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.72□□□□□ -2.13
SMARCB1Q12824 AC093249.1-201ENST00000567049 203 ntBASIC1.72□□□□□ -2.13
SMARCB1Q12824 AL391840.1-201ENST00000571144 367 ntBASIC1.72□□□□□ -2.13
SMARCB1Q12824 MIR5692A1-201ENST00000580523 69 ntBASIC1.72□□□□□ -2.13
SMARCB1Q12824 AC109347.2-201ENST00000610220 349 ntBASIC1.72□□□□□ -2.13
SMARCB1Q12824 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.72□□□□□ -2.13
SMARCB1Q12824 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.72□□□□□ -2.13
SMARCB1Q12824 AC072046.2-201ENST00000618366 268 ntBASIC1.72□□□□□ -2.13
SMARCB1Q12824 Z69720.2-201ENST00000624755 279 ntBASIC1.72□□□□□ -2.13
SMARCB1Q12824 SCARNA4-202ENST00000625402 129 ntBASIC1.72□□□□□ -2.13
SMARCB1Q12824 AC090582.1-201ENST00000636321 199 ntBASIC1.72□□□□□ -2.13
SMARCB1Q12824 MIR3529-201ENST00000637713 78 ntBASIC1.72□□□□□ -2.13
SMARCB1Q12824 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.71□□□□□ -2.13
SMARCB1Q12824 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SMARCB1Q12824 RNU6-1010P-201ENST00000362757 107 ntBASIC1.71□□□□□ -2.14
SMARCB1Q12824 SNORD48-201ENST00000364953 64 ntBASIC1.71□□□□□ -2.14
SMARCB1Q12824 RNU6-487P-201ENST00000365430 104 ntBASIC1.71□□□□□ -2.14
SMARCB1Q12824 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
SMARCB1Q12824 U8.10-201ENST00000384260 133 ntBASIC1.71□□□□□ -2.14
SMARCB1Q12824 SNORD116-1-201ENST00000384335 95 ntBASIC1.71□□□□□ -2.14
SMARCB1Q12824 MIR186-201ENST00000384988 86 ntBASIC1.71□□□□□ -2.14
SMARCB1Q12824 SNORA17.3-201ENST00000391159 129 ntBASIC1.71□□□□□ -2.14
SMARCB1Q12824 CDK8P2-201ENST00000415020 547 ntBASIC1.71□□□□□ -2.14
SMARCB1Q12824 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.71□□□□□ -2.14
SMARCB1Q12824 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SMARCB1Q12824 MTCO2P19-201ENST00000427513 598 ntBASIC1.71□□□□□ -2.14
SMARCB1Q12824 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.71□□□□□ -2.14
SMARCB1Q12824 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.71□□□□□ -2.14
SMARCB1Q12824 RPL23AP6-201ENST00000446637 472 ntBASIC1.71□□□□□ -2.14
SMARCB1Q12824 PPP1R2P5-201ENST00000457256 603 ntBASIC1.71□□□□□ -2.14
SMARCB1Q12824 AC087884.1-201ENST00000469738 328 ntBASIC1.71□□□□□ -2.14
SMARCB1Q12824 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.71□□□□□ -2.14
SMARCB1Q12824 AC022880.1-201ENST00000534017 973 ntBASIC1.71□□□□□ -2.14
SMARCB1Q12824 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.71□□□□□ -2.14
SMARCB1Q12824 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.71□□□□□ -2.14
SMARCB1Q12824 AC233702.2-202ENST00000562547 291 ntBASIC1.71□□□□□ -2.14
SMARCB1Q12824 MTATP6P3-201ENST00000581686 676 ntBASIC1.71□□□□□ -2.14
SMARCB1Q12824 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.71□□□□□ -2.14
SMARCB1Q12824 AC008945.2-201ENST00000606056 604 ntBASIC1.71□□□□□ -2.14
SMARCB1Q12824 AP001596.2-201ENST00000608410 312 ntBASIC1.71□□□□□ -2.14
SMARCB1Q12824 AC026585.1-201ENST00000619582 524 ntBASIC1.71□□□□□ -2.14
SMARCB1Q12824 AC097372.5-201ENST00000623665 376 ntBASIC1.71□□□□□ -2.14
SMARCB1Q12824 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.71□□□□□ -2.14
SMARCB1Q12824 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.7□□□□□ -2.14
SMARCB1Q12824 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SMARCB1Q12824 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SMARCB1Q12824 AC138393.1-203ENST00000327086 343 ntBASIC1.7□□□□□ -2.14
SMARCB1Q12824 OR4G2P-201ENST00000328113 903 ntBASIC1.7□□□□□ -2.14
SMARCB1Q12824 SNORD56.1-201ENST00000362913 68 ntBASIC1.7□□□□□ -2.14
SMARCB1Q12824 SNORD114-19-201ENST00000363072 75 ntBASIC1.7□□□□□ -2.14
SMARCB1Q12824 RNY3P9-201ENST00000384727 106 ntBASIC1.7□□□□□ -2.14
SMARCB1Q12824 MIR517C-201ENST00000385103 95 ntBASIC1.7□□□□□ -2.14
SMARCB1Q12824 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
SMARCB1Q12824 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.7□□□□□ -2.14
SMARCB1Q12824 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.7□□□□□ -2.14
SMARCB1Q12824 MTATP6P18-201ENST00000417994 673 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms