Protein–RNA interactions for Protein: Q12770

SCAP, Sterol regulatory element-binding protein cleavage-activating protein, humanhuman

Predictions only

Length 1,279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPQ12770 HMGB1P24-202ENST00000615653 685 ntBASIC3.36□□□□□ -1.87
SCAPQ12770 MIR8062-201ENST00000621515 85 ntBASIC3.36□□□□□ -1.87
SCAPQ12770 U6.104-201ENST00000637979 90 ntBASIC3.36□□□□□ -1.87
SCAPQ12770 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.36□□□□□ -1.87
SCAPQ12770 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SCAPQ12770 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
SCAPQ12770 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
SCAPQ12770 AC010680.1-201ENST00000590024 3590 ntBASIC3.35□□□□□ -1.87
SCAPQ12770 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SCAPQ12770 MIR449A-201ENST00000362113 91 ntBASIC3.35□□□□□ -1.87
SCAPQ12770 Y_RNA.288-201ENST00000364854 92 ntBASIC3.35□□□□□ -1.87
SCAPQ12770 MIR628-201ENST00000385229 95 ntBASIC3.35□□□□□ -1.87
SCAPQ12770 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.35□□□□□ -1.87
SCAPQ12770 NDUFS5P4-201ENST00000412983 318 ntBASIC3.35□□□□□ -1.87
SCAPQ12770 AL117339.3-201ENST00000418733 162 ntBASIC3.35□□□□□ -1.87
SCAPQ12770 AC092423.1-201ENST00000430165 186 ntBASIC3.35□□□□□ -1.87
SCAPQ12770 AL353705.1-201ENST00000433468 480 ntBASIC3.35□□□□□ -1.87
SCAPQ12770 DYNLT3P2-201ENST00000442517 295 ntBASIC3.35□□□□□ -1.87
SCAPQ12770 AL078601.1-201ENST00000444542 271 ntBASIC3.35□□□□□ -1.87
SCAPQ12770 Z75741.1-201ENST00000446793 314 ntBASIC3.35□□□□□ -1.87
SCAPQ12770 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SCAPQ12770 AC104564.1-201ENST00000493028 407 ntBASIC3.35□□□□□ -1.87
SCAPQ12770 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.35□□□□□ -1.87
SCAPQ12770 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.35□□□□□ -1.87
SCAPQ12770 RNU6-1143P-201ENST00000516125 104 ntBASIC3.35□□□□□ -1.87
SCAPQ12770 RNU6-572P-201ENST00000516724 80 ntBASIC3.35□□□□□ -1.87
SCAPQ12770 SNORD59.2-201ENST00000516873 68 ntBASIC3.35□□□□□ -1.87
SCAPQ12770 AC091144.1-201ENST00000519573 138 ntBASIC3.35□□□□□ -1.87
SCAPQ12770 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.35□□□□□ -1.87
SCAPQ12770 MIR3945-201ENST00000581853 98 ntBASIC3.35□□□□□ -1.87
SCAPQ12770 RPS29P30-201ENST00000600975 111 ntBASIC3.35□□□□□ -1.87
SCAPQ12770 AL158827.2-201ENST00000602494 330 ntBASIC3.35□□□□□ -1.87
SCAPQ12770 AL162713.1-201ENST00000604480 262 ntBASIC3.35□□□□□ -1.87
SCAPQ12770 AL033523.1-201ENST00000605153 153 ntBASIC3.35□□□□□ -1.87
SCAPQ12770 AL691447.3-201ENST00000635020 330 ntBASIC3.35□□□□□ -1.87
SCAPQ12770 U6.99-201ENST00000637524 83 ntBASIC3.35□□□□□ -1.87
SCAPQ12770 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SCAPQ12770 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.35□□□□□ -1.87
SCAPQ12770 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SCAPQ12770 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
SCAPQ12770 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
SCAPQ12770 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SCAPQ12770 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.35□□□□□ -1.87
SCAPQ12770 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SCAPQ12770 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SCAPQ12770 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.34□□□□□ -1.87
SCAPQ12770 AL355596.1-201ENST00000565399 3996 ntBASIC3.34□□□□□ -1.87
SCAPQ12770 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.34□□□□□ -1.87
SCAPQ12770 MIR422A-201ENST00000362286 90 ntBASIC3.34□□□□□ -1.87
SCAPQ12770 SNORA14A-201ENST00000364773 135 ntBASIC3.34□□□□□ -1.87
SCAPQ12770 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SCAPQ12770 AL357075.1-201ENST00000404107 726 ntBASIC3.34□□□□□ -1.87
SCAPQ12770 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.34□□□□□ -1.87
SCAPQ12770 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.34□□□□□ -1.87
SCAPQ12770 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.34□□□□□ -1.87
SCAPQ12770 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SCAPQ12770 AL714022.1-201ENST00000439897 151 ntBASIC3.34□□□□□ -1.87
SCAPQ12770 Z98949.2-201ENST00000440996 144 ntBASIC3.34□□□□□ -1.87
SCAPQ12770 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SCAPQ12770 CHEK2P4-201ENST00000450340 246 ntBASIC3.34□□□□□ -1.87
SCAPQ12770 PCNPP5-201ENST00000452246 481 ntBASIC3.34□□□□□ -1.87
SCAPQ12770 AL031183.1-201ENST00000457667 207 ntBASIC3.34□□□□□ -1.87
SCAPQ12770 AC092798.1-201ENST00000458542 409 ntBASIC3.34□□□□□ -1.87
SCAPQ12770 RNU7-169P-201ENST00000459456 61 ntBASIC3.34□□□□□ -1.87
SCAPQ12770 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.34□□□□□ -1.87
SCAPQ12770 RPS4XP22-201ENST00000480755 780 ntBASIC3.34□□□□□ -1.87
SCAPQ12770 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.34□□□□□ -1.87
SCAPQ12770 RNU6-911P-201ENST00000516523 104 ntBASIC3.34□□□□□ -1.87
SCAPQ12770 MIR5696-201ENST00000578474 85 ntBASIC3.34□□□□□ -1.87
SCAPQ12770 MTND4LP5-201ENST00000605152 292 ntBASIC3.34□□□□□ -1.87
SCAPQ12770 AC011373.1-201ENST00000607270 237 ntBASIC3.34□□□□□ -1.87
SCAPQ12770 MIR1244-1-201ENST00000612829 85 ntBASIC3.34□□□□□ -1.87
SCAPQ12770 AL442067.1-201ENST00000613261 223 ntBASIC3.34□□□□□ -1.87
SCAPQ12770 MIR1244-3-201ENST00000635744 85 ntBASIC3.34□□□□□ -1.87
SCAPQ12770 MIR1244-2-201ENST00000636449 85 ntBASIC3.34□□□□□ -1.87
SCAPQ12770 MIR1244-4-202ENST00000636813 85 ntBASIC3.34□□□□□ -1.87
SCAPQ12770 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.87
SCAPQ12770 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
SCAPQ12770 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
SCAPQ12770 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SCAPQ12770 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
SCAPQ12770 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
SCAPQ12770 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.33□□□□□ -1.88
SCAPQ12770 ZNF72P-201ENST00000425869 1908 ntBASIC3.33□□□□□ -1.88
SCAPQ12770 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
SCAPQ12770 RNU6-595P-201ENST00000363944 107 ntBASIC3.33□□□□□ -1.88
SCAPQ12770 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.33□□□□□ -1.88
SCAPQ12770 SNORA51.11-201ENST00000384442 131 ntBASIC3.33□□□□□ -1.88
SCAPQ12770 Y_RNA.512-201ENST00000384518 102 ntBASIC3.33□□□□□ -1.88
SCAPQ12770 RNU6-658P-201ENST00000384606 106 ntBASIC3.33□□□□□ -1.88
SCAPQ12770 SNORA69.1-201ENST00000390904 137 ntBASIC3.33□□□□□ -1.88
SCAPQ12770 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.33□□□□□ -1.88
SCAPQ12770 RPL21P1-201ENST00000399532 476 ntBASIC3.33□□□□□ -1.88
SCAPQ12770 AL139095.1-201ENST00000404326 391 ntBASIC3.33□□□□□ -1.88
SCAPQ12770 AC009310.1-201ENST00000414414 451 ntBASIC3.33□□□□□ -1.88
SCAPQ12770 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.33□□□□□ -1.88
SCAPQ12770 OR2AQ1P-201ENST00000451972 200 ntBASIC3.33□□□□□ -1.88
SCAPQ12770 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.33□□□□□ -1.88
SCAPQ12770 RNU6-377P-201ENST00000515965 102 ntBASIC3.33□□□□□ -1.88
SCAPQ12770 RNU1-143P-201ENST00000516296 146 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms