Protein–RNA interactions for Protein: Q01831

XPC, DNA repair protein complementing XP-C cells, humanhuman

Predicted RBP Predictions only

Length 940 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPCQ01831 Z98751.3-201ENST00000604447 521 ntBASIC4.41□□□□□ -1.7
XPCQ01831 PRR13P7-201ENST00000605538 430 ntBASIC4.41□□□□□ -1.7
XPCQ01831 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.41□□□□□ -1.7
XPCQ01831 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
XPCQ01831 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.41□□□□□ -1.7
XPCQ01831 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
XPCQ01831 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
XPCQ01831 AL513302.2-201ENST00000562313 1842 ntBASIC4.4□□□□□ -1.7
XPCQ01831 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
XPCQ01831 Y_RNA.380-201ENST00000365663 111 ntBASIC4.4□□□□□ -1.71
XPCQ01831 SNORA69.1-201ENST00000390904 137 ntBASIC4.4□□□□□ -1.71
XPCQ01831 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
XPCQ01831 AL031659.1-201ENST00000447075 539 ntBASIC4.4□□□□□ -1.71
XPCQ01831 AC010655.3-201ENST00000478818 450 ntBASIC4.4□□□□□ -1.71
XPCQ01831 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.4□□□□□ -1.71
XPCQ01831 AC040926.1-201ENST00000530195 238 ntBASIC4.4□□□□□ -1.71
XPCQ01831 MIR3149-201ENST00000584629 83 ntBASIC4.4□□□□□ -1.71
XPCQ01831 AL355297.3-201ENST00000604082 446 ntBASIC4.4□□□□□ -1.71
XPCQ01831 AC024581.2-201ENST00000619986 252 ntBASIC4.4□□□□□ -1.71
XPCQ01831 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.4□□□□□ -1.71
XPCQ01831 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
XPCQ01831 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
XPCQ01831 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
XPCQ01831 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
XPCQ01831 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.39□□□□□ -1.71
XPCQ01831 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.39□□□□□ -1.71
XPCQ01831 RNU6-874P-201ENST00000362390 105 ntBASIC4.39□□□□□ -1.71
XPCQ01831 Y_RNA.452-201ENST00000384202 108 ntBASIC4.39□□□□□ -1.71
XPCQ01831 SNORA7.4-201ENST00000384249 137 ntBASIC4.39□□□□□ -1.71
XPCQ01831 SNORA12.2-201ENST00000391040 156 ntBASIC4.39□□□□□ -1.71
XPCQ01831 SAR1AP2-201ENST00000392696 594 ntBASIC4.39□□□□□ -1.71
XPCQ01831 MTCYBP2-201ENST00000407745 171 ntBASIC4.39□□□□□ -1.71
XPCQ01831 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.39□□□□□ -1.71
XPCQ01831 MTCO3P29-201ENST00000432119 779 ntBASIC4.39□□□□□ -1.71
XPCQ01831 AL513124.1-201ENST00000450410 614 ntBASIC4.39□□□□□ -1.71
XPCQ01831 AC093852.1-201ENST00000503587 266 ntBASIC4.39□□□□□ -1.71
XPCQ01831 MRPS35P2-201ENST00000508242 191 ntBASIC4.39□□□□□ -1.71
XPCQ01831 AC006199.1-201ENST00000548728 219 ntBASIC4.39□□□□□ -1.71
XPCQ01831 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.39□□□□□ -1.71
XPCQ01831 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.39□□□□□ -1.71
XPCQ01831 RMST_8.1-201ENST00000610287 165 ntBASIC4.39□□□□□ -1.71
XPCQ01831 U2.1-201ENST00000618978 145 ntBASIC4.39□□□□□ -1.71
XPCQ01831 AC022149.2-201ENST00000621061 203 ntBASIC4.39□□□□□ -1.71
XPCQ01831 AL136164.4-201ENST00000625013 2135 ntBASIC4.39□□□□□ -1.71
XPCQ01831 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.38□□□□□ -1.71
XPCQ01831 SET-203ENST00000372688 801 ntTSL 2 BASIC4.38□□□□□ -1.71
XPCQ01831 Y_RNA.574-201ENST00000384766 95 ntBASIC4.38□□□□□ -1.71
XPCQ01831 MIR591-201ENST00000385290 95 ntBASIC4.38□□□□□ -1.71
XPCQ01831 MIR1302-3-201ENST00000408128 138 ntBASIC4.38□□□□□ -1.71
XPCQ01831 MIR1252-201ENST00000408861 65 ntBASIC4.38□□□□□ -1.71
XPCQ01831 HMGN2P20-201ENST00000437531 273 ntBASIC4.38□□□□□ -1.71
XPCQ01831 AC007969.2-201ENST00000441891 191 ntBASIC4.38□□□□□ -1.71
XPCQ01831 AC108938.1-201ENST00000451204 136 ntBASIC4.38□□□□□ -1.71
XPCQ01831 AC010099.1-201ENST00000455434 375 ntBASIC4.38□□□□□ -1.71
XPCQ01831 Y_RNA.715-201ENST00000517082 110 ntBASIC4.38□□□□□ -1.71
XPCQ01831 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.38□□□□□ -1.71
XPCQ01831 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
XPCQ01831 AC104581.2-201ENST00000572227 430 ntBASIC4.38□□□□□ -1.71
XPCQ01831 7SK.7-201ENST00000603504 247 ntBASIC4.38□□□□□ -1.71
XPCQ01831 AL021879.1-201ENST00000611756 288 ntBASIC4.38□□□□□ -1.71
XPCQ01831 XIST_intron.1-201ENST00000619444 68 ntBASIC4.38□□□□□ -1.71
XPCQ01831 MIR3199-2-201ENST00000636243 86 ntBASIC4.38□□□□□ -1.71
XPCQ01831 AL136360.1-201ENST00000503377 1900 ntBASIC4.38□□□□□ -1.71
XPCQ01831 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
XPCQ01831 AC233981.2-201ENST00000611524 1614 ntBASIC4.37□□□□□ -1.71
XPCQ01831 RNU6-238P-201ENST00000363313 106 ntBASIC4.37□□□□□ -1.71
XPCQ01831 Y_RNA.405-201ENST00000383979 100 ntBASIC4.37□□□□□ -1.71
XPCQ01831 Y_RNA.451-201ENST00000384200 100 ntBASIC4.37□□□□□ -1.71
XPCQ01831 Y_RNA.524-201ENST00000384564 100 ntBASIC4.37□□□□□ -1.71
XPCQ01831 Y_RNA.561-201ENST00000384694 100 ntBASIC4.37□□□□□ -1.71
XPCQ01831 Y_RNA.592-201ENST00000410274 109 ntBASIC4.37□□□□□ -1.71
XPCQ01831 EEF1A1P41-201ENST00000414667 207 ntBASIC4.37□□□□□ -1.71
XPCQ01831 AL139132.1-201ENST00000431587 344 ntBASIC4.37□□□□□ -1.71
XPCQ01831 AL714022.1-201ENST00000439897 151 ntBASIC4.37□□□□□ -1.71
XPCQ01831 AL357552.1-201ENST00000445254 415 ntBASIC4.37□□□□□ -1.71
XPCQ01831 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.37□□□□□ -1.71
XPCQ01831 MTCO3P8-201ENST00000453691 755 ntBASIC4.37□□□□□ -1.71
XPCQ01831 RNU7-170P-201ENST00000459303 61 ntBASIC4.37□□□□□ -1.71
XPCQ01831 RNU7-175P-201ENST00000515915 61 ntBASIC4.37□□□□□ -1.71
XPCQ01831 AC131281.1-201ENST00000522984 164 ntBASIC4.37□□□□□ -1.71
XPCQ01831 AP000867.2-201ENST00000532468 320 ntBASIC4.37□□□□□ -1.71
XPCQ01831 MRPS36P4-201ENST00000534436 298 ntBASIC4.37□□□□□ -1.71
XPCQ01831 AC009163.5-201ENST00000575421 637 ntBASIC4.37□□□□□ -1.71
XPCQ01831 MIR3162-201ENST00000581818 82 ntBASIC4.37□□□□□ -1.71
XPCQ01831 AC019159.1-201ENST00000605094 187 ntBASIC4.37□□□□□ -1.71
XPCQ01831 AL138880.2-201ENST00000616214 239 ntBASIC4.37□□□□□ -1.71
XPCQ01831 AC068831.7-201ENST00000616954 363 ntBASIC4.37□□□□□ -1.71
XPCQ01831 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.37□□□□□ -1.71
XPCQ01831 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
XPCQ01831 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
XPCQ01831 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
XPCQ01831 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
XPCQ01831 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
XPCQ01831 RNU6-1109P-201ENST00000391187 107 ntBASIC4.36□□□□□ -1.71
XPCQ01831 MIR190B-201ENST00000401119 79 ntBASIC4.36□□□□□ -1.71
XPCQ01831 RNA5SP38-201ENST00000410750 119 ntBASIC4.36□□□□□ -1.71
XPCQ01831 AC006989.1-201ENST00000427212 131 ntBASIC4.36□□□□□ -1.71
XPCQ01831 AL135938.1-201ENST00000443141 297 ntBASIC4.36□□□□□ -1.71
XPCQ01831 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.36□□□□□ -1.71
XPCQ01831 MED28P2-201ENST00000475771 317 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms