Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 HMGB3P17-201ENST00000504195 649 ntBASIC1.72□□□□□ -2.13
CNTNAP1P78357 Y_RNA.687-201ENST00000516558 91 ntBASIC1.72□□□□□ -2.13
CNTNAP1P78357 SNORA43.2-201ENST00000516652 128 ntBASIC1.72□□□□□ -2.13
CNTNAP1P78357 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.72□□□□□ -2.13
CNTNAP1P78357 AC106038.2-201ENST00000520706 568 ntBASIC1.72□□□□□ -2.13
CNTNAP1P78357 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.72□□□□□ -2.13
CNTNAP1P78357 AP005435.4-201ENST00000529514 284 ntBASIC1.72□□□□□ -2.13
CNTNAP1P78357 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.72□□□□□ -2.13
CNTNAP1P78357 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.72□□□□□ -2.13
CNTNAP1P78357 SNRPGP17-201ENST00000603780 214 ntBASIC1.72□□□□□ -2.13
CNTNAP1P78357 AC022202.1-201ENST00000613515 211 ntBASIC1.72□□□□□ -2.13
CNTNAP1P78357 RMST_4.1-201ENST00000616886 107 ntBASIC1.72□□□□□ -2.13
CNTNAP1P78357 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.72□□□□□ -2.13
CNTNAP1P78357 RNU6-179P-201ENST00000363350 107 ntBASIC1.71□□□□□ -2.14
CNTNAP1P78357 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.71□□□□□ -2.14
CNTNAP1P78357 SNORD116-20-201ENST00000384529 92 ntBASIC1.71□□□□□ -2.14
CNTNAP1P78357 RNY1P4-201ENST00000384595 115 ntBASIC1.71□□□□□ -2.14
CNTNAP1P78357 CBX3P9-201ENST00000402326 552 ntBASIC1.71□□□□□ -2.14
CNTNAP1P78357 AL512604.1-201ENST00000404812 257 ntBASIC1.71□□□□□ -2.14
CNTNAP1P78357 MIR1304-201ENST00000408243 91 ntBASIC1.71□□□□□ -2.14
CNTNAP1P78357 AC074117.2-201ENST00000417130 397 ntBASIC1.71□□□□□ -2.14
CNTNAP1P78357 MTND6P13-201ENST00000443510 523 ntBASIC1.71□□□□□ -2.14
CNTNAP1P78357 RAP1BP2-201ENST00000478270 544 ntBASIC1.71□□□□□ -2.14
CNTNAP1P78357 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CNTNAP1P78357 RN7SKP256-201ENST00000517201 314 ntBASIC1.71□□□□□ -2.14
CNTNAP1P78357 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CNTNAP1P78357 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.71□□□□□ -2.14
CNTNAP1P78357 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.71□□□□□ -2.14
CNTNAP1P78357 MIR5692A1-201ENST00000580523 69 ntBASIC1.71□□□□□ -2.14
CNTNAP1P78357 AC012065.4-201ENST00000602445 679 ntBASIC1.71□□□□□ -2.14
CNTNAP1P78357 AL096840.1-201ENST00000603287 93 ntBASIC1.71□□□□□ -2.14
CNTNAP1P78357 AC019226.2-201ENST00000625973 424 ntBASIC1.71□□□□□ -2.14
CNTNAP1P78357 FARSBP1-201ENST00000435808 1778 ntBASIC1.71□□□□□ -2.14
CNTNAP1P78357 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CNTNAP1P78357 RNU6-1210P-201ENST00000363775 107 ntBASIC1.7□□□□□ -2.14
CNTNAP1P78357 RNU6-169P-201ENST00000365336 107 ntBASIC1.7□□□□□ -2.14
CNTNAP1P78357 AL031577.2-201ENST00000404133 280 ntBASIC1.7□□□□□ -2.14
CNTNAP1P78357 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.7□□□□□ -2.14
CNTNAP1P78357 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.7□□□□□ -2.14
CNTNAP1P78357 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.7□□□□□ -2.14
CNTNAP1P78357 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.7□□□□□ -2.14
CNTNAP1P78357 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.7□□□□□ -2.14
CNTNAP1P78357 MTND1P30-201ENST00000441241 901 ntBASIC1.7□□□□□ -2.14
CNTNAP1P78357 HMGB1P35-201ENST00000503360 598 ntBASIC1.7□□□□□ -2.14
CNTNAP1P78357 RBBP4P6-201ENST00000508098 202 ntBASIC1.7□□□□□ -2.14
CNTNAP1P78357 RNA5SP61-201ENST00000516453 100 ntBASIC1.7□□□□□ -2.14
CNTNAP1P78357 SCARNA24.1-201ENST00000516465 137 ntBASIC1.7□□□□□ -2.14
CNTNAP1P78357 RN7SKP287-201ENST00000516546 266 ntBASIC1.7□□□□□ -2.14
CNTNAP1P78357 RNU2-46P-201ENST00000517038 113 ntBASIC1.7□□□□□ -2.14
CNTNAP1P78357 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.7□□□□□ -2.14
CNTNAP1P78357 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.7□□□□□ -2.14
CNTNAP1P78357 AP003072.2-201ENST00000527756 676 ntBASIC1.7□□□□□ -2.14
CNTNAP1P78357 AC010928.2-201ENST00000588017 287 ntBASIC1.7□□□□□ -2.14
CNTNAP1P78357 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.7□□□□□ -2.14
CNTNAP1P78357 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.7□□□□□ -2.14
CNTNAP1P78357 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.69□□□□□ -2.14
CNTNAP1P78357 MTND5P17-201ENST00000418405 1603 ntBASIC1.69□□□□□ -2.14
CNTNAP1P78357 Y_RNA.68-201ENST00000362881 102 ntBASIC1.69□□□□□ -2.14
CNTNAP1P78357 RNU6-553P-201ENST00000364047 96 ntBASIC1.69□□□□□ -2.14
CNTNAP1P78357 U3.13-201ENST00000364804 214 ntBASIC1.69□□□□□ -2.14
CNTNAP1P78357 RNU6-1080P-201ENST00000383982 107 ntBASIC1.69□□□□□ -2.14
CNTNAP1P78357 MIR518A2-201ENST00000384966 87 ntBASIC1.69□□□□□ -2.14
CNTNAP1P78357 RNU1-139P-201ENST00000391307 165 ntBASIC1.69□□□□□ -2.14
CNTNAP1P78357 RNA5SP450-201ENST00000411206 102 ntBASIC1.69□□□□□ -2.14
CNTNAP1P78357 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.69□□□□□ -2.14
CNTNAP1P78357 USP9YP18-201ENST00000425912 695 ntBASIC1.69□□□□□ -2.14
CNTNAP1P78357 MTND5P25-201ENST00000430499 799 ntBASIC1.69□□□□□ -2.14
CNTNAP1P78357 IFNA20P-201ENST00000436840 528 ntBASIC1.69□□□□□ -2.14
CNTNAP1P78357 RPL23AP3-201ENST00000453844 468 ntBASIC1.69□□□□□ -2.14
CNTNAP1P78357 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.69□□□□□ -2.14
CNTNAP1P78357 AC116562.3-201ENST00000506136 177 ntBASIC1.69□□□□□ -2.14
CNTNAP1P78357 Vault.3-201ENST00000516676 95 ntBASIC1.69□□□□□ -2.14
CNTNAP1P78357 RNU6-232P-201ENST00000517144 64 ntBASIC1.69□□□□□ -2.14
CNTNAP1P78357 RNU6-667P-201ENST00000517186 102 ntBASIC1.69□□□□□ -2.14
CNTNAP1P78357 AC068587.5-201ENST00000528506 175 ntBASIC1.69□□□□□ -2.14
CNTNAP1P78357 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.69□□□□□ -2.14
CNTNAP1P78357 AP000763.2-201ENST00000540641 163 ntBASIC1.69□□□□□ -2.14
CNTNAP1P78357 ZNF321P-202ENST00000550843 495 ntBASIC1.69□□□□□ -2.14
CNTNAP1P78357 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.69□□□□□ -2.14
CNTNAP1P78357 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.69□□□□□ -2.14
CNTNAP1P78357 MIR3682-201ENST00000581338 84 ntBASIC1.69□□□□□ -2.14
CNTNAP1P78357 AC005771.1-201ENST00000585581 349 ntBASIC1.69□□□□□ -2.14
CNTNAP1P78357 AC093424.1-201ENST00000604999 338 ntBASIC1.69□□□□□ -2.14
CNTNAP1P78357 AL627230.6-201ENST00000611129 280 ntBASIC1.69□□□□□ -2.14
CNTNAP1P78357 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.69□□□□□ -2.14
CNTNAP1P78357 RMST_7.1-201ENST00000621935 268 ntBASIC1.69□□□□□ -2.14
CNTNAP1P78357 AC093648.1-201ENST00000623546 606 ntBASIC1.69□□□□□ -2.14
CNTNAP1P78357 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CNTNAP1P78357 RNA5SP363-201ENST00000365072 115 ntBASIC1.68□□□□□ -2.14
CNTNAP1P78357 RNU6-611P-201ENST00000384276 104 ntBASIC1.68□□□□□ -2.14
CNTNAP1P78357 RNU6-1274P-201ENST00000384557 107 ntBASIC1.68□□□□□ -2.14
CNTNAP1P78357 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.68□□□□□ -2.14
CNTNAP1P78357 RNU2-48P-201ENST00000410694 191 ntBASIC1.68□□□□□ -2.14
CNTNAP1P78357 RNA5SP111-201ENST00000411386 101 ntBASIC1.68□□□□□ -2.14
CNTNAP1P78357 OR9R1P-201ENST00000412200 877 ntBASIC1.68□□□□□ -2.14
CNTNAP1P78357 RPL31P63-201ENST00000422565 375 ntBASIC1.68□□□□□ -2.14
CNTNAP1P78357 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.68□□□□□ -2.14
CNTNAP1P78357 MTATP6P16-201ENST00000434543 526 ntBASIC1.68□□□□□ -2.14
CNTNAP1P78357 AC104850.1-201ENST00000435940 476 ntBASIC1.68□□□□□ -2.14
CNTNAP1P78357 AC073614.1-201ENST00000438690 650 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms