Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 Y_RNA.472-201ENST00000384322 102 ntBASIC0.88□□□□□ -2.27
TPM4P67936 MIR764-201ENST00000390811 85 ntBASIC0.88□□□□□ -2.27
TPM4P67936 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.88□□□□□ -2.27
TPM4P67936 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.88□□□□□ -2.27
TPM4P67936 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.88□□□□□ -2.27
TPM4P67936 COX6CP14-201ENST00000469580 174 ntBASIC0.88□□□□□ -2.27
TPM4P67936 RNU2-10P-201ENST00000516375 211 ntBASIC0.88□□□□□ -2.27
TPM4P67936 SCARNA16.2-201ENST00000516520 172 ntBASIC0.88□□□□□ -2.27
TPM4P67936 AL021879.1-201ENST00000611756 288 ntBASIC0.88□□□□□ -2.27
TPM4P67936 AC006386.1-201ENST00000619436 415 ntBASIC0.88□□□□□ -2.27
TPM4P67936 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.88□□□□□ -2.27
TPM4P67936 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
TPM4P67936 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.87□□□□□ -2.27
TPM4P67936 RNU6-723P-201ENST00000383973 107 ntBASIC0.87□□□□□ -2.27
TPM4P67936 RNU6-331P-201ENST00000384724 107 ntBASIC0.87□□□□□ -2.27
TPM4P67936 RNU6-298P-201ENST00000390888 96 ntBASIC0.87□□□□□ -2.27
TPM4P67936 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.87□□□□□ -2.27
TPM4P67936 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.87□□□□□ -2.27
TPM4P67936 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.87□□□□□ -2.27
TPM4P67936 ATP5J2P3-201ENST00000451550 258 ntBASIC0.87□□□□□ -2.27
TPM4P67936 snoU13.27-201ENST00000459278 104 ntBASIC0.87□□□□□ -2.27
TPM4P67936 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.87□□□□□ -2.27
TPM4P67936 AC023050.2-201ENST00000544968 387 ntBASIC0.87□□□□□ -2.27
TPM4P67936 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.87□□□□□ -2.27
TPM4P67936 AL034555.1-201ENST00000604816 211 ntBASIC0.87□□□□□ -2.27
TPM4P67936 AC080078.3-201ENST00000605407 463 ntBASIC0.87□□□□□ -2.27
TPM4P67936 AC211469.2-201ENST00000605461 205 ntBASIC0.87□□□□□ -2.27
TPM4P67936 MIR3976-201ENST00000606807 139 ntBASIC0.87□□□□□ -2.27
TPM4P67936 AC108747.1-201ENST00000609508 535 ntBASIC0.87□□□□□ -2.27
TPM4P67936 AC091895.1-201ENST00000624494 256 ntBASIC0.87□□□□□ -2.27
TPM4P67936 RNU6-862P-201ENST00000362804 105 ntBASIC0.86□□□□□ -2.27
TPM4P67936 RNU6-1285P-201ENST00000363480 105 ntBASIC0.86□□□□□ -2.27
TPM4P67936 RNU6-1179P-201ENST00000384667 107 ntBASIC0.86□□□□□ -2.27
TPM4P67936 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.86□□□□□ -2.27
TPM4P67936 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC0.86□□□□□ -2.27
TPM4P67936 HSPE1P13-201ENST00000451143 297 ntBASIC0.86□□□□□ -2.27
TPM4P67936 snoU13.23-201ENST00000458863 104 ntBASIC0.86□□□□□ -2.27
TPM4P67936 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.86□□□□□ -2.27
TPM4P67936 ATP5EP1-201ENST00000510257 156 ntBASIC0.86□□□□□ -2.27
TPM4P67936 AC116353.3-201ENST00000511215 249 ntBASIC0.86□□□□□ -2.27
TPM4P67936 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.86□□□□□ -2.27
TPM4P67936 ACA64.5-201ENST00000516207 127 ntBASIC0.86□□□□□ -2.27
TPM4P67936 AC013828.2-201ENST00000532487 235 ntBASIC0.86□□□□□ -2.27
TPM4P67936 MTND4LP25-201ENST00000570218 163 ntBASIC0.86□□□□□ -2.27
TPM4P67936 DEFB131E-202ENST00000602581 683 ntBASIC0.86□□□□□ -2.27
TPM4P67936 AL451064.1-201ENST00000607718 471 ntBASIC0.86□□□□□ -2.27
TPM4P67936 AC083806.3-201ENST00000614016 455 ntBASIC0.86□□□□□ -2.27
TPM4P67936 AC131159.1-201ENST00000621854 213 ntBASIC0.86□□□□□ -2.27
TPM4P67936 RNU6-78P-201ENST00000362897 107 ntBASIC0.85□□□□□ -2.27
TPM4P67936 MIR544A-201ENST00000384855 91 ntBASIC0.85□□□□□ -2.27
TPM4P67936 RNU11-5P-201ENST00000391216 129 ntBASIC0.85□□□□□ -2.27
TPM4P67936 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.85□□□□□ -2.27
TPM4P67936 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.85□□□□□ -2.27
TPM4P67936 RPS4XP11-201ENST00000446897 772 ntBASIC0.85□□□□□ -2.27
TPM4P67936 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.85□□□□□ -2.27
TPM4P67936 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.85□□□□□ -2.27
TPM4P67936 AC022447.4-201ENST00000504053 364 ntBASIC0.85□□□□□ -2.27
TPM4P67936 MTCO3P28-201ENST00000513351 515 ntBASIC0.85□□□□□ -2.27
TPM4P67936 RN7SKP219-201ENST00000516825 296 ntBASIC0.85□□□□□ -2.27
TPM4P67936 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.85□□□□□ -2.27
TPM4P67936 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.85□□□□□ -2.27
TPM4P67936 AC008088.1-201ENST00000580993 280 ntBASIC0.85□□□□□ -2.27
TPM4P67936 BNIP3P8-201ENST00000597863 560 ntBASIC0.85□□□□□ -2.27
TPM4P67936 AC026585.1-201ENST00000619582 524 ntBASIC0.85□□□□□ -2.27
TPM4P67936 AL138955.1-201ENST00000622881 1040 ntBASIC0.85□□□□□ -2.27
TPM4P67936 AL159152.1-201ENST00000635019 2587 ntBASIC0.85□□□□□ -2.27
TPM4P67936 RNU6-438P-201ENST00000365561 103 ntBASIC0.84□□□□□ -2.27
TPM4P67936 MIR578-201ENST00000384828 96 ntBASIC0.84□□□□□ -2.27
TPM4P67936 MIR19B1-201ENST00000384829 87 ntBASIC0.84□□□□□ -2.27
TPM4P67936 MIR100-201ENST00000385259 80 ntBASIC0.84□□□□□ -2.27
TPM4P67936 ERHP2-201ENST00000402323 299 ntBASIC0.84□□□□□ -2.27
TPM4P67936 AC006461.1-201ENST00000412637 326 ntBASIC0.84□□□□□ -2.27
TPM4P67936 MTCO1P21-201ENST00000416634 589 ntBASIC0.84□□□□□ -2.27
TPM4P67936 ARL5AP1-201ENST00000418991 388 ntBASIC0.84□□□□□ -2.27
TPM4P67936 PIGFP2-201ENST00000421400 651 ntBASIC0.84□□□□□ -2.27
TPM4P67936 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.84□□□□□ -2.27
TPM4P67936 MTCO3P29-201ENST00000432119 779 ntBASIC0.84□□□□□ -2.27
TPM4P67936 MTND3P5-201ENST00000512798 333 ntBASIC0.84□□□□□ -2.27
TPM4P67936 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.84□□□□□ -2.27
TPM4P67936 MIR4698-201ENST00000577795 80 ntBASIC0.84□□□□□ -2.27
TPM4P67936 AC107304.1-201ENST00000604229 296 ntBASIC0.84□□□□□ -2.27
TPM4P67936 AC008945.2-201ENST00000606056 604 ntBASIC0.84□□□□□ -2.27
TPM4P67936 RNU6-1192P-201ENST00000612197 107 ntBASIC0.84□□□□□ -2.27
TPM4P67936 AC040896.1-201ENST00000613819 479 ntBASIC0.84□□□□□ -2.27
TPM4P67936 RNU6-489P-201ENST00000618289 107 ntBASIC0.84□□□□□ -2.27
TPM4P67936 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.84□□□□□ -2.27
TPM4P67936 AL356596.1-201ENST00000624230 379 ntBASIC0.84□□□□□ -2.27
TPM4P67936 AC068647.2-201ENST00000637380 353 ntBASIC0.84□□□□□ -2.27
TPM4P67936 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
TPM4P67936 Y_RNA.46-201ENST00000362695 102 ntBASIC0.83□□□□□ -2.28
TPM4P67936 RNY4P24-201ENST00000362735 96 ntBASIC0.83□□□□□ -2.28
TPM4P67936 SNORA32.2-201ENST00000384049 122 ntBASIC0.83□□□□□ -2.28
TPM4P67936 SNORA12.2-201ENST00000391040 156 ntBASIC0.83□□□□□ -2.28
TPM4P67936 AL356776.1-201ENST00000406574 447 ntBASIC0.83□□□□□ -2.28
TPM4P67936 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.83□□□□□ -2.28
TPM4P67936 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.83□□□□□ -2.28
TPM4P67936 AL591043.1-201ENST00000432461 424 ntBASIC0.83□□□□□ -2.28
TPM4P67936 MTND5P15-201ENST00000434246 349 ntBASIC0.83□□□□□ -2.28
TPM4P67936 AC069257.2-201ENST00000441819 155 ntBASIC0.83□□□□□ -2.28
TPM4P67936 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms