Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC020895.1-201ENST00000595362 272 ntBASIC3.69□□□□□ -1.82
YBX1P67809 AC244505.7-201ENST00000599675 272 ntBASIC3.69□□□□□ -1.82
YBX1P67809 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.69□□□□□ -1.82
YBX1P67809 AC084757.4-201ENST00000616350 526 ntBASIC3.69□□□□□ -1.82
YBX1P67809 CR392039.5-201ENST00000623201 510 ntBASIC3.69□□□□□ -1.82
YBX1P67809 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.69□□□□□ -1.82
YBX1P67809 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
YBX1P67809 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
YBX1P67809 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
YBX1P67809 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
YBX1P67809 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
YBX1P67809 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.68□□□□□ -1.82
YBX1P67809 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
YBX1P67809 AL672296.1-201ENST00000427780 2158 ntBASIC3.68□□□□□ -1.82
YBX1P67809 RNA5SP502-201ENST00000362694 119 ntBASIC3.68□□□□□ -1.82
YBX1P67809 RNA5SP97-201ENST00000365006 84 ntBASIC3.68□□□□□ -1.82
YBX1P67809 Y_RNA.308-201ENST00000365043 101 ntBASIC3.68□□□□□ -1.82
YBX1P67809 Y_RNA.319-201ENST00000365138 92 ntBASIC3.68□□□□□ -1.82
YBX1P67809 Y_RNA.446-201ENST00000384178 104 ntBASIC3.68□□□□□ -1.82
YBX1P67809 RNU6-281P-201ENST00000384212 103 ntBASIC3.68□□□□□ -1.82
YBX1P67809 U8.11-201ENST00000384699 133 ntBASIC3.68□□□□□ -1.82
YBX1P67809 U8.12-201ENST00000384701 133 ntBASIC3.68□□□□□ -1.82
YBX1P67809 Y_RNA.570-201ENST00000384750 101 ntBASIC3.68□□□□□ -1.82
YBX1P67809 MIR10B-201ENST00000385011 110 ntBASIC3.68□□□□□ -1.82
YBX1P67809 SNORA46.1-201ENST00000391069 153 ntBASIC3.68□□□□□ -1.82
YBX1P67809 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
YBX1P67809 RNU6-1001P-201ENST00000411265 100 ntBASIC3.68□□□□□ -1.82
YBX1P67809 SETP5-201ENST00000437270 562 ntBASIC3.68□□□□□ -1.82
YBX1P67809 POLR2KP2-201ENST00000438155 177 ntBASIC3.68□□□□□ -1.82
YBX1P67809 MRPS10P1-201ENST00000448483 130 ntBASIC3.68□□□□□ -1.82
YBX1P67809 AC007395.1-201ENST00000451333 677 ntBASIC3.68□□□□□ -1.82
YBX1P67809 U8.18-201ENST00000459285 133 ntBASIC3.68□□□□□ -1.82
YBX1P67809 SNRPGP7-201ENST00000469016 106 ntBASIC3.68□□□□□ -1.82
YBX1P67809 RPS4XP13-201ENST00000483219 789 ntBASIC3.68□□□□□ -1.82
YBX1P67809 RNU6-1183P-201ENST00000517054 60 ntBASIC3.68□□□□□ -1.82
YBX1P67809 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.68□□□□□ -1.82
YBX1P67809 MIR3690-201ENST00000580266 75 ntBASIC3.68□□□□□ -1.82
YBX1P67809 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.68□□□□□ -1.82
YBX1P67809 AC004825.2-201ENST00000616634 455 ntBASIC3.68□□□□□ -1.82
YBX1P67809 AL365265.1-201ENST00000621045 234 ntBASIC3.68□□□□□ -1.82
YBX1P67809 AC039056.2-201ENST00000622261 511 ntBASIC3.68□□□□□ -1.82
YBX1P67809 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
YBX1P67809 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
YBX1P67809 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
YBX1P67809 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
YBX1P67809 AC008568.2-201ENST00000623862 2313 ntBASIC3.67□□□□□ -1.82
YBX1P67809 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
YBX1P67809 UBE2WP1-201ENST00000362030 340 ntBASIC3.67□□□□□ -1.82
YBX1P67809 Y_RNA.111-201ENST00000363248 100 ntBASIC3.67□□□□□ -1.82
YBX1P67809 Y_RNA.331-201ENST00000365267 102 ntBASIC3.67□□□□□ -1.82
YBX1P67809 RNU6-898P-201ENST00000365627 104 ntBASIC3.67□□□□□ -1.82
YBX1P67809 RNU6-658P-201ENST00000384606 106 ntBASIC3.67□□□□□ -1.82
YBX1P67809 HLFP1-201ENST00000402375 499 ntBASIC3.67□□□□□ -1.82
YBX1P67809 RNA5SP129-201ENST00000410276 118 ntBASIC3.67□□□□□ -1.82
YBX1P67809 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.67□□□□□ -1.82
YBX1P67809 AL445584.1-201ENST00000431451 330 ntBASIC3.67□□□□□ -1.82
YBX1P67809 Z82210.1-201ENST00000440037 231 ntBASIC3.67□□□□□ -1.82
YBX1P67809 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.67□□□□□ -1.82
YBX1P67809 RPL23AP3-201ENST00000453844 468 ntBASIC3.67□□□□□ -1.82
YBX1P67809 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.67□□□□□ -1.82
YBX1P67809 RNU6-1219P-201ENST00000516143 112 ntBASIC3.67□□□□□ -1.82
YBX1P67809 SNORA74D-201ENST00000516404 141 ntBASIC3.67□□□□□ -1.82
YBX1P67809 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.67□□□□□ -1.82
YBX1P67809 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.67□□□□□ -1.82
YBX1P67809 SNORA51-201ENST00000606420 132 ntBASIC3.67□□□□□ -1.82
YBX1P67809 AC005828.6-201ENST00000606610 232 ntBASIC3.67□□□□□ -1.82
YBX1P67809 AC073349.3-201ENST00000617616 186 ntBASIC3.67□□□□□ -1.82
YBX1P67809 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.67□□□□□ -1.82
YBX1P67809 AC024581.2-201ENST00000619986 252 ntBASIC3.67□□□□□ -1.82
YBX1P67809 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.67□□□□□ -1.82
YBX1P67809 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
YBX1P67809 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
YBX1P67809 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
YBX1P67809 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
YBX1P67809 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
YBX1P67809 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
YBX1P67809 RNU6-961P-201ENST00000363893 105 ntBASIC3.66□□□□□ -1.82
YBX1P67809 RNU6-81P-201ENST00000365608 104 ntBASIC3.66□□□□□ -1.82
YBX1P67809 Z98749.2-208ENST00000381646 500 ntBASIC3.66□□□□□ -1.82
YBX1P67809 RNU6-140P-201ENST00000384566 108 ntBASIC3.66□□□□□ -1.82
YBX1P67809 MIR325-201ENST00000385260 98 ntBASIC3.66□□□□□ -1.82
YBX1P67809 HSPE1P26-201ENST00000405341 275 ntBASIC3.66□□□□□ -1.82
YBX1P67809 SNORA3.3-201ENST00000408712 125 ntBASIC3.66□□□□□ -1.82
YBX1P67809 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.66□□□□□ -1.82
YBX1P67809 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.66□□□□□ -1.82
YBX1P67809 SNORA59A-201ENST00000459326 152 ntBASIC3.66□□□□□ -1.82
YBX1P67809 RNA5SP309-201ENST00000516670 106 ntBASIC3.66□□□□□ -1.82
YBX1P67809 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.66□□□□□ -1.82
YBX1P67809 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
YBX1P67809 AL391261.3-201ENST00000557194 520 ntBASIC3.66□□□□□ -1.82
YBX1P67809 KLKP1-201ENST00000595979 403 ntBASIC3.66□□□□□ -1.82
YBX1P67809 AC007179.3-201ENST00000604976 235 ntBASIC3.66□□□□□ -1.82
YBX1P67809 SNORA62.6-201ENST00000606322 83 ntBASIC3.66□□□□□ -1.82
YBX1P67809 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
YBX1P67809 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
YBX1P67809 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
YBX1P67809 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.65□□□□□ -1.82
YBX1P67809 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.65□□□□□ -1.82
YBX1P67809 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.65□□□□□ -1.82
YBX1P67809 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms