Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC0.98□□□□□ -2.25
SKP1P63208 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.98□□□□□ -2.25
SKP1P63208 AL606834.3-201ENST00000602615 496 ntBASIC0.98□□□□□ -2.25
SKP1P63208 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.98□□□□□ -2.25
SKP1P63208 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.98□□□□□ -2.25
SKP1P63208 AL356596.1-201ENST00000624230 379 ntBASIC0.98□□□□□ -2.25
SKP1P63208 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
SKP1P63208 RNU6-384P-201ENST00000364900 104 ntBASIC0.97□□□□□ -2.25
SKP1P63208 RNU6-53P-201ENST00000365367 106 ntBASIC0.97□□□□□ -2.25
SKP1P63208 RNU6-26P-201ENST00000383985 107 ntBASIC0.97□□□□□ -2.25
SKP1P63208 RNU6-968P-201ENST00000384076 107 ntBASIC0.97□□□□□ -2.25
SKP1P63208 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.97□□□□□ -2.25
SKP1P63208 AL163195.1-201ENST00000496941 348 ntBASIC0.97□□□□□ -2.25
SKP1P63208 AC022447.4-201ENST00000504053 364 ntBASIC0.97□□□□□ -2.25
SKP1P63208 MTCO3P9-201ENST00000506989 781 ntBASIC0.97□□□□□ -2.25
SKP1P63208 UBL5P1-201ENST00000507979 193 ntBASIC0.97□□□□□ -2.25
SKP1P63208 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.97□□□□□ -2.25
SKP1P63208 RNU5A-4P-201ENST00000516588 111 ntBASIC0.97□□□□□ -2.25
SKP1P63208 AL512310.8-201ENST00000550183 120 ntBASIC0.97□□□□□ -2.25
SKP1P63208 AC090578.1-201ENST00000604955 591 ntBASIC0.97□□□□□ -2.25
SKP1P63208 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.97□□□□□ -2.25
SKP1P63208 AC108747.1-201ENST00000609508 535 ntBASIC0.97□□□□□ -2.25
SKP1P63208 RMST_7.1-201ENST00000621935 268 ntBASIC0.97□□□□□ -2.25
SKP1P63208 OR4G3P-201ENST00000633500 913 ntBASIC0.97□□□□□ -2.25
SKP1P63208 MIR340-201ENST00000362125 95 ntBASIC0.96□□□□□ -2.26
SKP1P63208 Y_RNA.46-201ENST00000362695 102 ntBASIC0.96□□□□□ -2.26
SKP1P63208 SNORA4.1-201ENST00000364263 144 ntBASIC0.96□□□□□ -2.26
SKP1P63208 MIR548B-201ENST00000385247 97 ntBASIC0.96□□□□□ -2.26
SKP1P63208 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.96□□□□□ -2.26
SKP1P63208 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.96□□□□□ -2.26
SKP1P63208 SNX2P2-201ENST00000424553 323 ntBASIC0.96□□□□□ -2.26
SKP1P63208 AC245047.4-201ENST00000433189 144 ntBASIC0.96□□□□□ -2.26
SKP1P63208 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.96□□□□□ -2.26
SKP1P63208 AL592221.1-201ENST00000605266 382 ntBASIC0.96□□□□□ -2.26
SKP1P63208 SNORD114-21-201ENST00000606412 72 ntBASIC0.96□□□□□ -2.26
SKP1P63208 AC004492.1-201ENST00000607036 742 ntBASIC0.96□□□□□ -2.26
SKP1P63208 AC027335.2-201ENST00000624030 375 ntBASIC0.96□□□□□ -2.26
SKP1P63208 AC009033.1-201ENST00000624279 431 ntBASIC0.96□□□□□ -2.26
SKP1P63208 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.95□□□□□ -2.26
SKP1P63208 SNORA63D-201ENST00000364359 132 ntBASIC0.95□□□□□ -2.26
SKP1P63208 RNU4-38P-201ENST00000364472 129 ntBASIC0.95□□□□□ -2.26
SKP1P63208 RNU6-1179P-201ENST00000384667 107 ntBASIC0.95□□□□□ -2.26
SKP1P63208 MIR513A1-201ENST00000385138 129 ntBASIC0.95□□□□□ -2.26
SKP1P63208 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.95□□□□□ -2.26
SKP1P63208 AC244505.5-201ENST00000443639 207 ntBASIC0.95□□□□□ -2.26
SKP1P63208 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.95□□□□□ -2.26
SKP1P63208 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC0.95□□□□□ -2.26
SKP1P63208 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.95□□□□□ -2.26
SKP1P63208 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.95□□□□□ -2.26
SKP1P63208 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.95□□□□□ -2.26
SKP1P63208 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.95□□□□□ -2.26
SKP1P63208 MIR4781-201ENST00000585250 76 ntBASIC0.95□□□□□ -2.26
SKP1P63208 AL034555.1-201ENST00000604816 211 ntBASIC0.95□□□□□ -2.26
SKP1P63208 MIR6857-201ENST00000613267 93 ntBASIC0.95□□□□□ -2.26
SKP1P63208 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.95□□□□□ -2.26
SKP1P63208 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.95□□□□□ -2.26
SKP1P63208 RNU4-15P-201ENST00000362613 141 ntBASIC0.94□□□□□ -2.26
SKP1P63208 RNU6-78P-201ENST00000362897 107 ntBASIC0.94□□□□□ -2.26
SKP1P63208 RNU6-433P-201ENST00000363216 104 ntBASIC0.94□□□□□ -2.26
SKP1P63208 RNU6-1019P-201ENST00000364424 107 ntBASIC0.94□□□□□ -2.26
SKP1P63208 RNU6-1187P-201ENST00000364771 110 ntBASIC0.94□□□□□ -2.26
SKP1P63208 MIR194-1-201ENST00000384892 85 ntBASIC0.94□□□□□ -2.26
SKP1P63208 RNU6-1176P-201ENST00000390955 107 ntBASIC0.94□□□□□ -2.26
SKP1P63208 PIGPP2-201ENST00000411569 458 ntBASIC0.94□□□□□ -2.26
SKP1P63208 MTCO3P41-201ENST00000414801 328 ntBASIC0.94□□□□□ -2.26
SKP1P63208 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.94□□□□□ -2.26
SKP1P63208 AL353777.1-201ENST00000425552 326 ntBASIC0.94□□□□□ -2.26
SKP1P63208 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.94□□□□□ -2.26
SKP1P63208 MTND1P32-201ENST00000433043 938 ntBASIC0.94□□□□□ -2.26
SKP1P63208 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.94□□□□□ -2.26
SKP1P63208 AC132479.1-201ENST00000449160 144 ntBASIC0.94□□□□□ -2.26
SKP1P63208 MIR449C-201ENST00000516047 92 ntBASIC0.94□□□□□ -2.26
SKP1P63208 RNU6-201P-201ENST00000517100 61 ntBASIC0.94□□□□□ -2.26
SKP1P63208 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC0.94□□□□□ -2.26
SKP1P63208 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.94□□□□□ -2.26
SKP1P63208 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.94□□□□□ -2.26
SKP1P63208 MZT1P2-201ENST00000604387 248 ntBASIC0.94□□□□□ -2.26
SKP1P63208 AC103810.9-201ENST00000606688 112 ntBASIC0.94□□□□□ -2.26
SKP1P63208 AC026585.1-201ENST00000619582 524 ntBASIC0.94□□□□□ -2.26
SKP1P63208 AL138955.1-201ENST00000622881 1040 ntBASIC0.94□□□□□ -2.26
SKP1P63208 AL445523.1-201ENST00000451184 1362 ntBASIC0.94□□□□□ -2.26
SKP1P63208 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.94□□□□□ -2.26
SKP1P63208 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
SKP1P63208 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
SKP1P63208 RNU6-1285P-201ENST00000363480 105 ntBASIC0.93□□□□□ -2.26
SKP1P63208 RNU6-1080P-201ENST00000383982 107 ntBASIC0.93□□□□□ -2.26
SKP1P63208 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
SKP1P63208 MTATP6P20-201ENST00000414147 562 ntBASIC0.93□□□□□ -2.26
SKP1P63208 AC019070.1-201ENST00000415008 1024 ntBASIC0.93□□□□□ -2.26
SKP1P63208 MTCO1P21-201ENST00000416634 589 ntBASIC0.93□□□□□ -2.26
SKP1P63208 RPL22P18-201ENST00000417197 377 ntBASIC0.93□□□□□ -2.26
SKP1P63208 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.93□□□□□ -2.26
SKP1P63208 AC069257.2-201ENST00000441819 155 ntBASIC0.93□□□□□ -2.26
SKP1P63208 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.93□□□□□ -2.26
SKP1P63208 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.93□□□□□ -2.26
SKP1P63208 RPL31P3-201ENST00000458430 332 ntBASIC0.93□□□□□ -2.26
SKP1P63208 RPL39P28-201ENST00000465655 155 ntBASIC0.93□□□□□ -2.26
SKP1P63208 AC145146.1-201ENST00000496370 254 ntBASIC0.93□□□□□ -2.26
SKP1P63208 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.93□□□□□ -2.26
SKP1P63208 RNU7-51P-201ENST00000516560 62 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms