Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 AP001148.1-201ENST00000624124 2359 ntBASIC3.68□□□□□ -1.82
HERVK_113P62684 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
HERVK_113P62684 RNU6-105P-201ENST00000363909 104 ntBASIC3.68□□□□□ -1.82
HERVK_113P62684 Y_RNA.526-201ENST00000384572 110 ntBASIC3.68□□□□□ -1.82
HERVK_113P62684 Y_RNA.556-201ENST00000384677 113 ntBASIC3.68□□□□□ -1.82
HERVK_113P62684 RPL26P27-201ENST00000414397 437 ntBASIC3.68□□□□□ -1.82
HERVK_113P62684 AL356968.1-201ENST00000416622 474 ntBASIC3.68□□□□□ -1.82
HERVK_113P62684 AL591043.1-201ENST00000432461 424 ntBASIC3.68□□□□□ -1.82
HERVK_113P62684 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.68□□□□□ -1.82
HERVK_113P62684 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.68□□□□□ -1.82
HERVK_113P62684 RNU7-87P-201ENST00000459343 62 ntBASIC3.68□□□□□ -1.82
HERVK_113P62684 RPL30P10-201ENST00000488148 337 ntBASIC3.68□□□□□ -1.82
HERVK_113P62684 AC093852.1-201ENST00000503587 266 ntBASIC3.68□□□□□ -1.82
HERVK_113P62684 RNU6-397P-201ENST00000516226 104 ntBASIC3.68□□□□□ -1.82
HERVK_113P62684 AL110115.1-201ENST00000614396 364 ntBASIC3.68□□□□□ -1.82
HERVK_113P62684 U2.21-201ENST00000637295 81 ntBASIC3.68□□□□□ -1.82
HERVK_113P62684 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.68□□□□□ -1.82
HERVK_113P62684 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.68□□□□□ -1.82
HERVK_113P62684 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HERVK_113P62684 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HERVK_113P62684 AF117829.1-206ENST00000621883 3802 ntBASIC3.67□□□□□ -1.82
HERVK_113P62684 SRP72P2-201ENST00000344851 1979 ntBASIC3.67□□□□□ -1.82
HERVK_113P62684 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.67□□□□□ -1.82
HERVK_113P62684 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
HERVK_113P62684 AC009541.1-201ENST00000438279 2662 ntBASIC3.67□□□□□ -1.82
HERVK_113P62684 SNORA5B-201ENST00000363786 132 ntBASIC3.67□□□□□ -1.82
HERVK_113P62684 RNU6-1318P-201ENST00000365389 103 ntBASIC3.67□□□□□ -1.82
HERVK_113P62684 SNORA63.7-201ENST00000365579 123 ntBASIC3.67□□□□□ -1.82
HERVK_113P62684 RNU6-784P-201ENST00000384330 106 ntBASIC3.67□□□□□ -1.82
HERVK_113P62684 MTCO3P19-201ENST00000415864 321 ntBASIC3.67□□□□□ -1.82
HERVK_113P62684 AC098831.1-201ENST00000440661 216 ntBASIC3.67□□□□□ -1.82
HERVK_113P62684 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.67□□□□□ -1.82
HERVK_113P62684 RNA5SP310-201ENST00000459084 116 ntBASIC3.67□□□□□ -1.82
HERVK_113P62684 RN7SKP210-201ENST00000459176 261 ntBASIC3.67□□□□□ -1.82
HERVK_113P62684 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.67□□□□□ -1.82
HERVK_113P62684 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.67□□□□□ -1.82
HERVK_113P62684 AC010265.1-201ENST00000513509 211 ntBASIC3.67□□□□□ -1.82
HERVK_113P62684 RNY3P15-201ENST00000516297 97 ntBASIC3.67□□□□□ -1.82
HERVK_113P62684 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.67□□□□□ -1.82
HERVK_113P62684 AC024153.1-201ENST00000603103 365 ntBASIC3.67□□□□□ -1.82
HERVK_113P62684 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.67□□□□□ -1.82
HERVK_113P62684 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.67□□□□□ -1.82
HERVK_113P62684 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.67□□□□□ -1.82
HERVK_113P62684 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.67□□□□□ -1.82
HERVK_113P62684 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
HERVK_113P62684 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HERVK_113P62684 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HERVK_113P62684 AC022336.2-201ENST00000568966 2538 ntBASIC3.66□□□□□ -1.82
HERVK_113P62684 SNORD56.3-201ENST00000363507 71 ntBASIC3.66□□□□□ -1.82
HERVK_113P62684 RNU4-50P-201ENST00000364361 141 ntBASIC3.66□□□□□ -1.82
HERVK_113P62684 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.66□□□□□ -1.82
HERVK_113P62684 SNORA54-201ENST00000384281 123 ntBASIC3.66□□□□□ -1.82
HERVK_113P62684 Y_RNA.476-201ENST00000384347 108 ntBASIC3.66□□□□□ -1.82
HERVK_113P62684 Y_RNA.551-201ENST00000384661 102 ntBASIC3.66□□□□□ -1.82
HERVK_113P62684 MIR518D-201ENST00000385014 87 ntBASIC3.66□□□□□ -1.82
HERVK_113P62684 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HERVK_113P62684 AL591034.1-201ENST00000407447 340 ntBASIC3.66□□□□□ -1.82
HERVK_113P62684 Y_RNA.592-201ENST00000410274 109 ntBASIC3.66□□□□□ -1.82
HERVK_113P62684 RPL23AP22-201ENST00000437556 453 ntBASIC3.66□□□□□ -1.82
HERVK_113P62684 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HERVK_113P62684 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.66□□□□□ -1.82
HERVK_113P62684 RNU1-143P-201ENST00000516296 146 ntBASIC3.66□□□□□ -1.82
HERVK_113P62684 SNORA64.4-201ENST00000516632 81 ntBASIC3.66□□□□□ -1.82
HERVK_113P62684 RN7SKP272-201ENST00000516988 232 ntBASIC3.66□□□□□ -1.82
HERVK_113P62684 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.66□□□□□ -1.82
HERVK_113P62684 AL390123.1-201ENST00000603216 237 ntBASIC3.66□□□□□ -1.82
HERVK_113P62684 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.66□□□□□ -1.82
HERVK_113P62684 U1.23-201ENST00000610293 146 ntBASIC3.66□□□□□ -1.82
HERVK_113P62684 uc_338.25-201ENST00000613756 156 ntBASIC3.66□□□□□ -1.82
HERVK_113P62684 RNU1-68P-201ENST00000615382 146 ntBASIC3.66□□□□□ -1.82
HERVK_113P62684 U1.39-201ENST00000621562 146 ntBASIC3.66□□□□□ -1.82
HERVK_113P62684 MIR7153-201ENST00000637758 57 ntBASIC3.66□□□□□ -1.82
HERVK_113P62684 AC241585.2-209ENST00000638217 143 ntBASIC3.66□□□□□ -1.82
HERVK_113P62684 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.66□□□□□ -1.82
HERVK_113P62684 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HERVK_113P62684 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
HERVK_113P62684 AC090740.1-201ENST00000623193 2262 ntBASIC3.65□□□□□ -1.82
HERVK_113P62684 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
HERVK_113P62684 AL035425.3-201ENST00000564206 4996 ntBASIC3.65□□□□□ -1.82
HERVK_113P62684 RNU6-874P-201ENST00000362390 105 ntBASIC3.65□□□□□ -1.83
HERVK_113P62684 RNU6-858P-201ENST00000362436 107 ntBASIC3.65□□□□□ -1.83
HERVK_113P62684 RNA5SP295-201ENST00000362655 121 ntBASIC3.65□□□□□ -1.83
HERVK_113P62684 Y_RNA.396-201ENST00000383949 103 ntBASIC3.65□□□□□ -1.83
HERVK_113P62684 Y_RNA.405-201ENST00000383979 100 ntBASIC3.65□□□□□ -1.83
HERVK_113P62684 Y_RNA.451-201ENST00000384200 100 ntBASIC3.65□□□□□ -1.83
HERVK_113P62684 SNORD116-20-201ENST00000384529 92 ntBASIC3.65□□□□□ -1.83
HERVK_113P62684 Y_RNA.524-201ENST00000384564 100 ntBASIC3.65□□□□□ -1.83
HERVK_113P62684 Y_RNA.561-201ENST00000384694 100 ntBASIC3.65□□□□□ -1.83
HERVK_113P62684 SNORA12.2-201ENST00000391040 156 ntBASIC3.65□□□□□ -1.83
HERVK_113P62684 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.65□□□□□ -1.83
HERVK_113P62684 RPL21P1-201ENST00000399532 476 ntBASIC3.65□□□□□ -1.83
HERVK_113P62684 MIR888-201ENST00000401186 77 ntBASIC3.65□□□□□ -1.83
HERVK_113P62684 AL031121.1-201ENST00000406553 254 ntBASIC3.65□□□□□ -1.83
HERVK_113P62684 RNU6-1245P-201ENST00000411130 106 ntBASIC3.65□□□□□ -1.83
HERVK_113P62684 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HERVK_113P62684 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.65□□□□□ -1.83
HERVK_113P62684 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.65□□□□□ -1.83
HERVK_113P62684 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.65□□□□□ -1.83
HERVK_113P62684 RPS29P20-201ENST00000489592 171 ntBASIC3.65□□□□□ -1.83
HERVK_113P62684 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms