Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 MTND2P33-201ENST00000506452 1031 ntBASIC0.35□□□□□ -2.35
LSM3P62310 SUMO2P5-201ENST00000506790 245 ntBASIC0.35□□□□□ -2.35
LSM3P62310 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.35□□□□□ -2.35
LSM3P62310 RNU4-57P-201ENST00000515980 135 ntBASIC0.35□□□□□ -2.35
LSM3P62310 SNORD60.2-201ENST00000516883 86 ntBASIC0.35□□□□□ -2.35
LSM3P62310 AP003355.1-201ENST00000518956 587 ntBASIC0.35□□□□□ -2.35
LSM3P62310 OR8K2P-201ENST00000524645 927 ntBASIC0.35□□□□□ -2.35
LSM3P62310 DEFB108A-201ENST00000530110 222 ntBASIC0.35□□□□□ -2.35
LSM3P62310 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.35□□□□□ -2.35
LSM3P62310 AL512347.1-201ENST00000566420 503 ntBASIC0.35□□□□□ -2.35
LSM3P62310 AC091135.1-201ENST00000585943 307 ntBASIC0.35□□□□□ -2.35
LSM3P62310 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.35□□□□□ -2.35
LSM3P62310 BNIP3P16-201ENST00000589779 534 ntBASIC0.35□□□□□ -2.35
LSM3P62310 AC105148.1-201ENST00000604961 409 ntBASIC0.35□□□□□ -2.35
LSM3P62310 AC006270.3-201ENST00000605967 1036 ntBASIC0.35□□□□□ -2.35
LSM3P62310 MIR15A-201ENST00000607334 83 ntBASIC0.35□□□□□ -2.35
LSM3P62310 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.35□□□□□ -2.35
LSM3P62310 AC099654.8-201ENST00000637757 681 ntBASIC0.35□□□□□ -2.35
LSM3P62310 RNU4-15P-201ENST00000362613 141 ntBASIC0.34□□□□□ -2.36
LSM3P62310 RNU6-969P-201ENST00000383900 105 ntBASIC0.34□□□□□ -2.36
LSM3P62310 RNU6-17P-201ENST00000384245 107 ntBASIC0.34□□□□□ -2.36
LSM3P62310 RNU6-18P-201ENST00000384527 107 ntBASIC0.34□□□□□ -2.36
LSM3P62310 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.34□□□□□ -2.36
LSM3P62310 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.34□□□□□ -2.36
LSM3P62310 AC003071.1-201ENST00000451219 789 ntBASIC0.34□□□□□ -2.36
LSM3P62310 RNU6-953P-201ENST00000459154 107 ntBASIC0.34□□□□□ -2.36
LSM3P62310 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.34□□□□□ -2.36
LSM3P62310 SNORD79.1-201ENST00000516069 84 ntBASIC0.34□□□□□ -2.36
LSM3P62310 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.34□□□□□ -2.36
LSM3P62310 AC126177.8-201ENST00000618339 1015 ntBASIC0.34□□□□□ -2.36
LSM3P62310 AL353997.5-201ENST00000618886 171 ntBASIC0.34□□□□□ -2.36
LSM3P62310 Y_RNA.140-201ENST00000363474 103 ntBASIC0.33□□□□□ -2.36
LSM3P62310 RNU6-1335P-201ENST00000365426 107 ntBASIC0.33□□□□□ -2.36
LSM3P62310 RNU6-945P-201ENST00000383947 107 ntBASIC0.33□□□□□ -2.36
LSM3P62310 MIR1305-201ENST00000408300 86 ntBASIC0.33□□□□□ -2.36
LSM3P62310 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.33□□□□□ -2.36
LSM3P62310 COX6CP10-201ENST00000416832 224 ntBASIC0.33□□□□□ -2.36
LSM3P62310 ELOCP9-201ENST00000418624 239 ntBASIC0.33□□□□□ -2.36
LSM3P62310 AL953862.1-201ENST00000423016 168 ntBASIC0.33□□□□□ -2.36
LSM3P62310 ZNF736P7Y-201ENST00000425158 820 ntBASIC0.33□□□□□ -2.36
LSM3P62310 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.33□□□□□ -2.36
LSM3P62310 AC093899.1-201ENST00000457984 376 ntBASIC0.33□□□□□ -2.36
LSM3P62310 RNU7-34P-201ENST00000459394 64 ntBASIC0.33□□□□□ -2.36
LSM3P62310 RNA5SP255-201ENST00000516370 107 ntBASIC0.33□□□□□ -2.36
LSM3P62310 RNA5SP121-201ENST00000516537 101 ntBASIC0.33□□□□□ -2.36
LSM3P62310 RNU6-229P-201ENST00000516614 102 ntBASIC0.33□□□□□ -2.36
LSM3P62310 SNORA43.2-201ENST00000516652 128 ntBASIC0.33□□□□□ -2.36
LSM3P62310 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.33□□□□□ -2.36
LSM3P62310 MIR4709-201ENST00000577272 72 ntBASIC0.33□□□□□ -2.36
LSM3P62310 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC0.33□□□□□ -2.36
LSM3P62310 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.33□□□□□ -2.36
LSM3P62310 BNIP3P19-201ENST00000605397 577 ntBASIC0.33□□□□□ -2.36
LSM3P62310 RNU6-395P-201ENST00000365662 106 ntBASIC0.32□□□□□ -2.36
LSM3P62310 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.32□□□□□ -2.36
LSM3P62310 AF228730.1-201ENST00000397972 663 ntBASIC0.32□□□□□ -2.36
LSM3P62310 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.32□□□□□ -2.36
LSM3P62310 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.32□□□□□ -2.36
LSM3P62310 AL035398.1-201ENST00000430869 322 ntBASIC0.32□□□□□ -2.36
LSM3P62310 MTCO3P29-201ENST00000432119 779 ntBASIC0.32□□□□□ -2.36
LSM3P62310 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.32□□□□□ -2.36
LSM3P62310 AC119751.4-201ENST00000507498 357 ntBASIC0.32□□□□□ -2.36
LSM3P62310 RNU6-1041P-201ENST00000516254 102 ntBASIC0.32□□□□□ -2.36
LSM3P62310 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.32□□□□□ -2.36
LSM3P62310 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.32□□□□□ -2.36
LSM3P62310 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.32□□□□□ -2.36
LSM3P62310 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.32□□□□□ -2.36
LSM3P62310 MIR3912-201ENST00000577566 105 ntBASIC0.32□□□□□ -2.36
LSM3P62310 MIR3945-201ENST00000581853 98 ntBASIC0.32□□□□□ -2.36
LSM3P62310 AL353765.1-201ENST00000605514 183 ntBASIC0.32□□□□□ -2.36
LSM3P62310 ELL2P3-201ENST00000457883 1602 ntBASIC0.31□□□□□ -2.36
LSM3P62310 U3.8-201ENST00000363675 217 ntBASIC0.31□□□□□ -2.36
LSM3P62310 SNORA50A-201ENST00000384225 134 ntBASIC0.31□□□□□ -2.36
LSM3P62310 RPS3AP36-201ENST00000398190 775 ntBASIC0.31□□□□□ -2.36
LSM3P62310 BTF3L4P1-201ENST00000413813 468 ntBASIC0.31□□□□□ -2.36
LSM3P62310 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.31□□□□□ -2.36
LSM3P62310 ARL5AP1-201ENST00000418991 388 ntBASIC0.31□□□□□ -2.36
LSM3P62310 AC092991.1-201ENST00000477176 376 ntBASIC0.31□□□□□ -2.36
LSM3P62310 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.31□□□□□ -2.36
LSM3P62310 AC002350.1-201ENST00000490759 375 ntBASIC0.31□□□□□ -2.36
LSM3P62310 TRBVA-201ENST00000498804 316 ntBASIC0.31□□□□□ -2.36
LSM3P62310 AC034244.1-201ENST00000507687 207 ntBASIC0.31□□□□□ -2.36
LSM3P62310 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.31□□□□□ -2.36
LSM3P62310 AC112206.3-201ENST00000514578 389 ntBASIC0.31□□□□□ -2.36
LSM3P62310 SNORA31.4-201ENST00000516049 129 ntBASIC0.31□□□□□ -2.36
LSM3P62310 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.31□□□□□ -2.36
LSM3P62310 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.31□□□□□ -2.36
LSM3P62310 AC021231.3-201ENST00000558497 370 ntBASIC0.31□□□□□ -2.36
LSM3P62310 AL132657.2-201ENST00000564417 358 ntBASIC0.31□□□□□ -2.36
LSM3P62310 MIR5695-201ENST00000579717 85 ntBASIC0.31□□□□□ -2.36
LSM3P62310 MIR4742-201ENST00000581069 85 ntBASIC0.31□□□□□ -2.36
LSM3P62310 MIR3136-201ENST00000583498 78 ntBASIC0.31□□□□□ -2.36
LSM3P62310 AC068790.6-201ENST00000602558 258 ntBASIC0.31□□□□□ -2.36
LSM3P62310 AL136363.2-201ENST00000604173 851 ntBASIC0.31□□□□□ -2.36
LSM3P62310 AC099785.1-201ENST00000605697 437 ntBASIC0.31□□□□□ -2.36
LSM3P62310 AP001596.2-201ENST00000608410 312 ntBASIC0.31□□□□□ -2.36
LSM3P62310 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
LSM3P62310 AC024940.5-201ENST00000622889 474 ntBASIC0.31□□□□□ -2.36
LSM3P62310 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.31□□□□□ -2.36
LSM3P62310 AL391994.1-201ENST00000254724 282 ntBASIC0.3□□□□□ -2.36
LSM3P62310 RNU6-468P-201ENST00000384003 109 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms