Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
VBP1P61758 RNU4-15P-201ENST00000362613 141 ntBASIC0.5□□□□□ -2.33
VBP1P61758 RNA5SP361-201ENST00000362686 118 ntBASIC0.5□□□□□ -2.33
VBP1P61758 RNA5SP126-201ENST00000365092 109 ntBASIC0.5□□□□□ -2.33
VBP1P61758 RNA5SP259-201ENST00000365541 109 ntBASIC0.5□□□□□ -2.33
VBP1P61758 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
VBP1P61758 Y_RNA.578-201ENST00000390903 88 ntBASIC0.5□□□□□ -2.33
VBP1P61758 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.5□□□□□ -2.33
VBP1P61758 MTCO3P29-201ENST00000432119 779 ntBASIC0.5□□□□□ -2.33
VBP1P61758 ART2BP-201ENST00000453501 499 ntBASIC0.5□□□□□ -2.33
VBP1P61758 SNRPFP4-201ENST00000456366 242 ntBASIC0.5□□□□□ -2.33
VBP1P61758 ATP5EP1-201ENST00000510257 156 ntBASIC0.5□□□□□ -2.33
VBP1P61758 RNU4-54P-201ENST00000516428 129 ntBASIC0.5□□□□□ -2.33
VBP1P61758 RN7SKP49-201ENST00000516675 260 ntBASIC0.5□□□□□ -2.33
VBP1P61758 AC026616.1-201ENST00000523157 525 ntBASIC0.5□□□□□ -2.33
VBP1P61758 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.5□□□□□ -2.33
VBP1P61758 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.5□□□□□ -2.33
VBP1P61758 MIR3146-201ENST00000580367 79 ntBASIC0.5□□□□□ -2.33
VBP1P61758 AC022432.1-201ENST00000595739 310 ntBASIC0.5□□□□□ -2.33
VBP1P61758 BNIP3P8-201ENST00000597863 560 ntBASIC0.5□□□□□ -2.33
VBP1P61758 AC068790.6-201ENST00000602558 258 ntBASIC0.5□□□□□ -2.33
VBP1P61758 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
VBP1P61758 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.5□□□□□ -2.33
VBP1P61758 SNORA4.2-201ENST00000365313 147 ntBASIC0.49□□□□□ -2.33
VBP1P61758 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.49□□□□□ -2.33
VBP1P61758 BTF3L4P1-201ENST00000413813 468 ntBASIC0.49□□□□□ -2.33
VBP1P61758 AL627311.1-201ENST00000431514 115 ntBASIC0.49□□□□□ -2.33
VBP1P61758 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.49□□□□□ -2.33
VBP1P61758 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.49□□□□□ -2.33
VBP1P61758 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC0.49□□□□□ -2.33
VBP1P61758 AC021146.8-201ENST00000507455 733 ntBASIC0.49□□□□□ -2.33
VBP1P61758 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
VBP1P61758 AC112206.3-201ENST00000514578 389 ntBASIC0.49□□□□□ -2.33
VBP1P61758 RN7SKP265-201ENST00000516448 223 ntBASIC0.49□□□□□ -2.33
VBP1P61758 RNU6-677P-201ENST00000516914 101 ntBASIC0.49□□□□□ -2.33
VBP1P61758 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.49□□□□□ -2.33
VBP1P61758 AL442163.3-201ENST00000554110 156 ntBASIC0.49□□□□□ -2.33
VBP1P61758 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.49□□□□□ -2.33
VBP1P61758 VN1R82P-201ENST00000601481 356 ntBASIC0.49□□□□□ -2.33
VBP1P61758 AC104073.3-201ENST00000610942 955 ntBASIC0.49□□□□□ -2.33
VBP1P61758 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.49□□□□□ -2.33
VBP1P61758 AC009541.1-201ENST00000438279 2662 ntBASIC0.49□□□□□ -2.33
VBP1P61758 AC092104.1-201ENST00000497346 1441 ntBASIC0.48□□□□□ -2.33
VBP1P61758 AL391994.1-201ENST00000254724 282 ntBASIC0.48□□□□□ -2.33
VBP1P61758 MIR378A-201ENST00000362177 66 ntBASIC0.48□□□□□ -2.33
VBP1P61758 RNU6-224P-201ENST00000384055 107 ntBASIC0.48□□□□□ -2.33
VBP1P61758 RNU6-910P-201ENST00000390844 107 ntBASIC0.48□□□□□ -2.33
VBP1P61758 RPS3AP36-201ENST00000398190 775 ntBASIC0.48□□□□□ -2.33
VBP1P61758 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.48□□□□□ -2.33
VBP1P61758 COX6CP10-201ENST00000416832 224 ntBASIC0.48□□□□□ -2.33
VBP1P61758 MTND4P15-201ENST00000437913 1033 ntBASIC0.48□□□□□ -2.33
VBP1P61758 AC092473.1-201ENST00000441098 221 ntBASIC0.48□□□□□ -2.33
VBP1P61758 AC073910.1-201ENST00000445047 438 ntBASIC0.48□□□□□ -2.33
VBP1P61758 ATP5J2P3-201ENST00000451550 258 ntBASIC0.48□□□□□ -2.33
VBP1P61758 AC108059.3-201ENST00000456388 214 ntBASIC0.48□□□□□ -2.33
VBP1P61758 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.48□□□□□ -2.33
VBP1P61758 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.48□□□□□ -2.33
VBP1P61758 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC0.48□□□□□ -2.33
VBP1P61758 SNORA31.2-201ENST00000516019 134 ntBASIC0.48□□□□□ -2.33
VBP1P61758 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.48□□□□□ -2.33
VBP1P61758 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.48□□□□□ -2.33
VBP1P61758 DEFB108E-201ENST00000524692 240 ntBASIC0.48□□□□□ -2.33
VBP1P61758 AL121579.1-201ENST00000555129 305 ntBASIC0.48□□□□□ -2.33
VBP1P61758 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.48□□□□□ -2.33
VBP1P61758 MTND3P13-201ENST00000574391 343 ntBASIC0.48□□□□□ -2.33
VBP1P61758 AC091135.1-201ENST00000585943 307 ntBASIC0.48□□□□□ -2.33
VBP1P61758 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC0.48□□□□□ -2.33
VBP1P61758 AC068620.3-201ENST00000602749 560 ntBASIC0.48□□□□□ -2.33
VBP1P61758 AC092574.1-201ENST00000609771 420 ntBASIC0.48□□□□□ -2.33
VBP1P61758 AC083806.3-201ENST00000614016 455 ntBASIC0.48□□□□□ -2.33
VBP1P61758 AL354696.1-201ENST00000614652 497 ntBASIC0.48□□□□□ -2.33
VBP1P61758 AC068880.4-201ENST00000623082 495 ntBASIC0.48□□□□□ -2.33
VBP1P61758 AL133216.2-202ENST00000634512 349 ntBASIC0.48□□□□□ -2.33
VBP1P61758 AC018630.2-201ENST00000534866 2403 ntBASIC0.47□□□□□ -2.33
VBP1P61758 AC068700.1-201ENST00000565862 3754 ntBASIC0.47□□□□□ -2.33
VBP1P61758 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.47□□□□□ -2.33
VBP1P61758 MIR412-201ENST00000362142 91 ntBASIC0.47□□□□□ -2.33
VBP1P61758 Y_RNA.124-201ENST00000363339 93 ntBASIC0.47□□□□□ -2.33
VBP1P61758 SNORD18A-201ENST00000363753 72 ntBASIC0.47□□□□□ -2.33
VBP1P61758 RNU6-384P-201ENST00000364900 104 ntBASIC0.47□□□□□ -2.33
VBP1P61758 RNU6-946P-201ENST00000383878 107 ntBASIC0.47□□□□□ -2.33
VBP1P61758 MTCO3P41-201ENST00000414801 328 ntBASIC0.47□□□□□ -2.33
VBP1P61758 USP9YP21-201ENST00000420603 432 ntBASIC0.47□□□□□ -2.33
VBP1P61758 AC002429.1-201ENST00000437672 148 ntBASIC0.47□□□□□ -2.33
VBP1P61758 RNU6-113P-201ENST00000516653 101 ntBASIC0.47□□□□□ -2.33
VBP1P61758 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.47□□□□□ -2.33
VBP1P61758 MIR3945-201ENST00000581853 98 ntBASIC0.47□□□□□ -2.33
VBP1P61758 AP001004.1-201ENST00000582468 324 ntBASIC0.47□□□□□ -2.33
VBP1P61758 DEFB131E-202ENST00000602581 683 ntBASIC0.47□□□□□ -2.33
VBP1P61758 AL022154.1-201ENST00000604698 785 ntBASIC0.47□□□□□ -2.33
VBP1P61758 BNIP3P10-201ENST00000605360 577 ntBASIC0.47□□□□□ -2.33
VBP1P61758 AC012467.1-201ENST00000607740 256 ntBASIC0.47□□□□□ -2.33
VBP1P61758 AC131159.1-201ENST00000621854 213 ntBASIC0.47□□□□□ -2.33
VBP1P61758 AL138955.1-201ENST00000622881 1040 ntBASIC0.47□□□□□ -2.33
VBP1P61758 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.47□□□□□ -2.33
VBP1P61758 AC023934.1-201ENST00000574529 2389 ntBASIC0.47□□□□□ -2.33
VBP1P61758 RNU6-1080P-201ENST00000383982 107 ntBASIC0.46□□□□□ -2.34
VBP1P61758 RNU6-482P-201ENST00000391068 107 ntBASIC0.46□□□□□ -2.34
VBP1P61758 MTND4P3-201ENST00000417829 541 ntBASIC0.46□□□□□ -2.34
VBP1P61758 RAB28P5-201ENST00000427490 651 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms