Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 RNU6-552P-201ENST00000362869 119 ntBASIC2.03□□□□□ -2.08
SRP54P61011 RNU6-944P-201ENST00000364023 107 ntBASIC2.03□□□□□ -2.08
SRP54P61011 U3.13-201ENST00000364804 214 ntBASIC2.03□□□□□ -2.08
SRP54P61011 RNA5SP138-201ENST00000365098 114 ntBASIC2.03□□□□□ -2.08
SRP54P61011 MIR518A2-201ENST00000384966 87 ntBASIC2.03□□□□□ -2.08
SRP54P61011 RNU6-903P-201ENST00000391270 109 ntBASIC2.03□□□□□ -2.08
SRP54P61011 AC073464.1-201ENST00000429823 534 ntBASIC2.03□□□□□ -2.08
SRP54P61011 RPS15AP10-201ENST00000432472 382 ntBASIC2.03□□□□□ -2.08
SRP54P61011 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.03□□□□□ -2.08
SRP54P61011 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.03□□□□□ -2.08
SRP54P61011 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.03□□□□□ -2.08
SRP54P61011 AL122001.1-201ENST00000457027 370 ntBASIC2.03□□□□□ -2.08
SRP54P61011 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.03□□□□□ -2.08
SRP54P61011 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.03□□□□□ -2.08
SRP54P61011 AC104435.1-201ENST00000483483 166 ntBASIC2.03□□□□□ -2.08
SRP54P61011 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.03□□□□□ -2.08
SRP54P61011 AGGF1P4-201ENST00000568249 801 ntBASIC2.03□□□□□ -2.08
SRP54P61011 AC008752.3-201ENST00000588113 712 ntBASIC2.03□□□□□ -2.08
SRP54P61011 RSL24D1P11-201ENST00000591045 491 ntBASIC2.03□□□□□ -2.08
SRP54P61011 AC110760.3-201ENST00000598794 467 ntBASIC2.03□□□□□ -2.08
SRP54P61011 AC025811.1-201ENST00000604312 472 ntBASIC2.03□□□□□ -2.08
SRP54P61011 AC123912.5-201ENST00000605470 343 ntBASIC2.03□□□□□ -2.08
SRP54P61011 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.03□□□□□ -2.08
SRP54P61011 Y_RNA.783-201ENST00000613546 102 ntBASIC2.03□□□□□ -2.08
SRP54P61011 AC008555.8-201ENST00000623602 2168 ntBASIC2.02□□□□□ -2.09
SRP54P61011 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SRP54P61011 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
SRP54P61011 RNU6-1285P-201ENST00000363480 105 ntBASIC2.02□□□□□ -2.09
SRP54P61011 MIR29C-201ENST00000385231 88 ntBASIC2.02□□□□□ -2.09
SRP54P61011 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.02□□□□□ -2.09
SRP54P61011 RNU2-2P-201ENST00000410396 191 ntBASIC2.02□□□□□ -2.09
SRP54P61011 AL590556.1-201ENST00000423231 483 ntBASIC2.02□□□□□ -2.09
SRP54P61011 CBX3P6-201ENST00000430257 527 ntBASIC2.02□□□□□ -2.09
SRP54P61011 AC243964.1-201ENST00000441814 261 ntBASIC2.02□□□□□ -2.09
SRP54P61011 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.02□□□□□ -2.09
SRP54P61011 RNU7-63P-201ENST00000459054 62 ntBASIC2.02□□□□□ -2.09
SRP54P61011 HMGB1P29-201ENST00000505659 499 ntBASIC2.02□□□□□ -2.09
SRP54P61011 AC010424.1-201ENST00000506336 297 ntBASIC2.02□□□□□ -2.09
SRP54P61011 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.02□□□□□ -2.09
SRP54P61011 AC069113.1-201ENST00000517763 267 ntBASIC2.02□□□□□ -2.09
SRP54P61011 AC022880.1-201ENST00000534017 973 ntBASIC2.02□□□□□ -2.09
SRP54P61011 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.02□□□□□ -2.09
SRP54P61011 MIR4524B-201ENST00000581569 115 ntBASIC2.02□□□□□ -2.09
SRP54P61011 AC008749.1-201ENST00000597650 306 ntBASIC2.02□□□□□ -2.09
SRP54P61011 AC002044.1-201ENST00000606707 158 ntBASIC2.02□□□□□ -2.09
SRP54P61011 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.02□□□□□ -2.09
SRP54P61011 U2.15-201ENST00000611544 191 ntBASIC2.02□□□□□ -2.09
SRP54P61011 U2.16-201ENST00000613119 191 ntBASIC2.02□□□□□ -2.09
SRP54P61011 U2.12-201ENST00000613778 191 ntBASIC2.02□□□□□ -2.09
SRP54P61011 U2.20-201ENST00000613956 192 ntBASIC2.02□□□□□ -2.09
SRP54P61011 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SRP54P61011 U2.9-201ENST00000615427 191 ntBASIC2.02□□□□□ -2.09
SRP54P61011 U2.11-201ENST00000616345 191 ntBASIC2.02□□□□□ -2.09
SRP54P61011 U2.2-201ENST00000616535 191 ntBASIC2.02□□□□□ -2.09
SRP54P61011 U2.3-201ENST00000617785 191 ntBASIC2.02□□□□□ -2.09
SRP54P61011 U2.19-201ENST00000618602 191 ntBASIC2.02□□□□□ -2.09
SRP54P61011 RNU2-1-201ENST00000618664 191 ntBASIC2.02□□□□□ -2.09
SRP54P61011 U2.6-201ENST00000619225 191 ntBASIC2.02□□□□□ -2.09
SRP54P61011 U2.5-201ENST00000619465 191 ntBASIC2.02□□□□□ -2.09
SRP54P61011 U2.10-201ENST00000620268 191 ntBASIC2.02□□□□□ -2.09
SRP54P61011 AL162373.1-201ENST00000620433 407 ntBASIC2.02□□□□□ -2.09
SRP54P61011 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.02□□□□□ -2.09
SRP54P61011 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SRP54P61011 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
SRP54P61011 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
SRP54P61011 RNU6-266P-201ENST00000364225 107 ntBASIC2.01□□□□□ -2.09
SRP54P61011 RNU6-336P-201ENST00000364891 107 ntBASIC2.01□□□□□ -2.09
SRP54P61011 RNA5SP450-201ENST00000411206 102 ntBASIC2.01□□□□□ -2.09
SRP54P61011 AL117339.3-201ENST00000418733 162 ntBASIC2.01□□□□□ -2.09
SRP54P61011 MTCO1P19-201ENST00000443487 500 ntBASIC2.01□□□□□ -2.09
SRP54P61011 AC245102.2-201ENST00000448956 180 ntBASIC2.01□□□□□ -2.09
SRP54P61011 RPL31P3-201ENST00000458430 332 ntBASIC2.01□□□□□ -2.09
SRP54P61011 RNU6-717P-201ENST00000459076 104 ntBASIC2.01□□□□□ -2.09
SRP54P61011 RNU7-167P-201ENST00000459160 62 ntBASIC2.01□□□□□ -2.09
SRP54P61011 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.01□□□□□ -2.09
SRP54P61011 AC022447.4-201ENST00000504053 364 ntBASIC2.01□□□□□ -2.09
SRP54P61011 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
SRP54P61011 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.01□□□□□ -2.09
SRP54P61011 Y_RNA.688-201ENST00000516565 95 ntBASIC2.01□□□□□ -2.09
SRP54P61011 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.01□□□□□ -2.09
SRP54P61011 ANP32BP3-201ENST00000559213 706 ntBASIC2.01□□□□□ -2.09
SRP54P61011 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.01□□□□□ -2.09
SRP54P61011 MTATP6P3-201ENST00000581686 676 ntBASIC2.01□□□□□ -2.09
SRP54P61011 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.01□□□□□ -2.09
SRP54P61011 AC009318.2-201ENST00000610917 651 ntBASIC2.01□□□□□ -2.09
SRP54P61011 SDR42E1P4-201ENST00000620894 481 ntBASIC2.01□□□□□ -2.09
SRP54P61011 YWHAEP7-203ENST00000622054 312 ntBASIC2.01□□□□□ -2.09
SRP54P61011 AC091932.3-201ENST00000624223 323 ntBASIC2.01□□□□□ -2.09
SRP54P61011 AC241585.2-209ENST00000638217 143 ntBASIC2.01□□□□□ -2.09
SRP54P61011 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.01□□□□□ -2.09
SRP54P61011 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.01□□□□□ -2.09
SRP54P61011 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
SRP54P61011 AP000560.1-201ENST00000624150 1937 ntBASIC2□□□□□ -2.09
SRP54P61011 RNU6-1141P-201ENST00000364520 107 ntBASIC2□□□□□ -2.09
SRP54P61011 RPS29P13-201ENST00000402041 169 ntBASIC2□□□□□ -2.09
SRP54P61011 AL512604.1-201ENST00000404812 257 ntBASIC2□□□□□ -2.09
SRP54P61011 RNA5SP338-201ENST00000410495 85 ntBASIC2□□□□□ -2.09
SRP54P61011 RNU6-293P-201ENST00000411259 106 ntBASIC2□□□□□ -2.09
SRP54P61011 AL139156.1-201ENST00000412785 841 ntBASIC2□□□□□ -2.09
SRP54P61011 SRIP3-201ENST00000413200 219 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms