Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.67□□□□□ -1.98
CLDN2P57739 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.67□□□□□ -1.98
CLDN2P57739 RNU6-692P-201ENST00000384496 107 ntBASIC2.67□□□□□ -1.98
CLDN2P57739 Y_RNA.529-201ENST00000384586 119 ntBASIC2.67□□□□□ -1.98
CLDN2P57739 BTF3L4P2-201ENST00000392798 346 ntBASIC2.67□□□□□ -1.98
CLDN2P57739 RNU2-23P-201ENST00000410545 195 ntBASIC2.67□□□□□ -1.98
CLDN2P57739 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.67□□□□□ -1.98
CLDN2P57739 AC138623.1-201ENST00000418060 216 ntBASIC2.67□□□□□ -1.98
CLDN2P57739 MICF-203ENST00000432679 129 ntBASIC2.67□□□□□ -1.98
CLDN2P57739 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.67□□□□□ -1.98
CLDN2P57739 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.67□□□□□ -1.98
CLDN2P57739 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CLDN2P57739 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.67□□□□□ -1.98
CLDN2P57739 RPL36AP48-201ENST00000485521 314 ntBASIC2.67□□□□□ -1.98
CLDN2P57739 RNU6-277P-201ENST00000516272 106 ntBASIC2.67□□□□□ -1.98
CLDN2P57739 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.67□□□□□ -1.98
CLDN2P57739 RAB11AP2-201ENST00000545905 639 ntBASIC2.67□□□□□ -1.98
CLDN2P57739 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.67□□□□□ -1.98
CLDN2P57739 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.67□□□□□ -1.98
CLDN2P57739 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.67□□□□□ -1.98
CLDN2P57739 AL117336.2-201ENST00000602435 335 ntBASIC2.67□□□□□ -1.98
CLDN2P57739 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.67□□□□□ -1.98
CLDN2P57739 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.67□□□□□ -1.98
CLDN2P57739 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CLDN2P57739 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CLDN2P57739 AC138915.1-201ENST00000565427 1685 ntBASIC2.66□□□□□ -1.98
CLDN2P57739 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CLDN2P57739 RNU6-486P-201ENST00000363116 107 ntBASIC2.66□□□□□ -1.98
CLDN2P57739 Y_RNA.384-201ENST00000383909 102 ntBASIC2.66□□□□□ -1.98
CLDN2P57739 Y_RNA.387-201ENST00000383918 102 ntBASIC2.66□□□□□ -1.98
CLDN2P57739 RNU6-601P-201ENST00000384540 107 ntBASIC2.66□□□□□ -1.98
CLDN2P57739 MIR544A-201ENST00000384855 91 ntBASIC2.66□□□□□ -1.98
CLDN2P57739 AL133475.1-201ENST00000404414 305 ntBASIC2.66□□□□□ -1.98
CLDN2P57739 AL451074.5-201ENST00000415894 435 ntBASIC2.66□□□□□ -1.98
CLDN2P57739 CYCSP48-201ENST00000417124 323 ntBASIC2.66□□□□□ -1.98
CLDN2P57739 Z98742.2-201ENST00000431564 187 ntBASIC2.66□□□□□ -1.98
CLDN2P57739 AC244505.4-201ENST00000434905 287 ntBASIC2.66□□□□□ -1.98
CLDN2P57739 RPS29P6-201ENST00000438196 145 ntBASIC2.66□□□□□ -1.98
CLDN2P57739 SSXP5-201ENST00000443473 287 ntBASIC2.66□□□□□ -1.98
CLDN2P57739 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.66□□□□□ -1.98
CLDN2P57739 SNORD5.1-201ENST00000458800 75 ntBASIC2.66□□□□□ -1.98
CLDN2P57739 RN7SL429P-201ENST00000479090 223 ntBASIC2.66□□□□□ -1.98
CLDN2P57739 RN7SL489P-201ENST00000486185 223 ntBASIC2.66□□□□□ -1.98
CLDN2P57739 RN7SL327P-201ENST00000488659 223 ntBASIC2.66□□□□□ -1.98
CLDN2P57739 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.66□□□□□ -1.98
CLDN2P57739 PTP4A1P4-201ENST00000512479 322 ntBASIC2.66□□□□□ -1.98
CLDN2P57739 ACA59.1-201ENST00000515966 143 ntBASIC2.66□□□□□ -1.98
CLDN2P57739 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.66□□□□□ -1.98
CLDN2P57739 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.66□□□□□ -1.98
CLDN2P57739 AC115990.1-201ENST00000526957 301 ntBASIC2.66□□□□□ -1.98
CLDN2P57739 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.66□□□□□ -1.98
CLDN2P57739 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.66□□□□□ -1.98
CLDN2P57739 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.66□□□□□ -1.98
CLDN2P57739 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.66□□□□□ -1.98
CLDN2P57739 AC078795.3-201ENST00000602913 472 ntBASIC2.66□□□□□ -1.98
CLDN2P57739 MIR6817-201ENST00000615588 66 ntBASIC2.66□□□□□ -1.98
CLDN2P57739 RN7SL853P-201ENST00000617250 223 ntBASIC2.66□□□□□ -1.98
CLDN2P57739 AC104985.2-201ENST00000620598 500 ntBASIC2.66□□□□□ -1.98
CLDN2P57739 AC092608.2-201ENST00000624427 218 ntBASIC2.66□□□□□ -1.98
CLDN2P57739 AC243829.7-201ENST00000633081 225 ntBASIC2.66□□□□□ -1.98
CLDN2P57739 MIR7157-201ENST00000635801 60 ntBASIC2.66□□□□□ -1.98
CLDN2P57739 MIR7515-201ENST00000637837 67 ntBASIC2.66□□□□□ -1.98
CLDN2P57739 MIR1302-1-201ENST00000637932 143 ntBASIC2.66□□□□□ -1.98
CLDN2P57739 AC008264.2-201ENST00000610193 3731 ntBASIC2.66□□□□□ -1.98
CLDN2P57739 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
CLDN2P57739 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CLDN2P57739 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
CLDN2P57739 MIR26A1-201ENST00000362205 77 ntBASIC2.65□□□□□ -1.99
CLDN2P57739 RNA5SP68-201ENST00000363885 119 ntBASIC2.65□□□□□ -1.99
CLDN2P57739 RNU6-1141P-201ENST00000364520 107 ntBASIC2.65□□□□□ -1.99
CLDN2P57739 RNU6-596P-201ENST00000365395 98 ntBASIC2.65□□□□□ -1.99
CLDN2P57739 U8.8-201ENST00000365399 135 ntBASIC2.65□□□□□ -1.99
CLDN2P57739 AC097463.2-201ENST00000421074 142 ntBASIC2.65□□□□□ -1.99
CLDN2P57739 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.65□□□□□ -1.99
CLDN2P57739 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.65□□□□□ -1.99
CLDN2P57739 AL133396.1-201ENST00000432048 687 ntBASIC2.65□□□□□ -1.99
CLDN2P57739 AC009969.1-201ENST00000438726 172 ntBASIC2.65□□□□□ -1.99
CLDN2P57739 AC009296.1-201ENST00000443146 155 ntBASIC2.65□□□□□ -1.99
CLDN2P57739 RPL39P29-201ENST00000447779 157 ntBASIC2.65□□□□□ -1.99
CLDN2P57739 RPS29P27-201ENST00000463711 170 ntBASIC2.65□□□□□ -1.99
CLDN2P57739 MTND4P17-201ENST00000470444 350 ntBASIC2.65□□□□□ -1.99
CLDN2P57739 AC092185.1-201ENST00000491371 97 ntBASIC2.65□□□□□ -1.99
CLDN2P57739 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.65□□□□□ -1.99
CLDN2P57739 AC096725.1-201ENST00000514266 313 ntBASIC2.65□□□□□ -1.99
CLDN2P57739 RNA5SP148-201ENST00000516527 94 ntBASIC2.65□□□□□ -1.99
CLDN2P57739 RNA5SP380-201ENST00000517190 98 ntBASIC2.65□□□□□ -1.99
CLDN2P57739 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.65□□□□□ -1.99
CLDN2P57739 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.65□□□□□ -1.99
CLDN2P57739 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.65□□□□□ -1.99
CLDN2P57739 AC016727.1-205ENST00000605437 569 ntBASIC2.65□□□□□ -1.99
CLDN2P57739 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CLDN2P57739 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CLDN2P57739 AC108206.1-201ENST00000570186 4159 ntBASIC2.65□□□□□ -1.99
CLDN2P57739 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.65□□□□□ -1.99
CLDN2P57739 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CLDN2P57739 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CLDN2P57739 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.65□□□□□ -1.99
CLDN2P57739 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
CLDN2P57739 Z75746.1-201ENST00000440243 2080 ntBASIC2.64□□□□□ -1.99
CLDN2P57739 SNORD32A-201ENST00000364805 84 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 228.6 ms