Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.29□□□□□ -1.88
PER3P56645 MAPK10-322ENST00000641485 4530 ntBASIC3.29□□□□□ -1.88
PER3P56645 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PER3P56645 AC058791.1-201ENST00000608412 3198 ntBASIC3.28□□□□□ -1.88
PER3P56645 RNU6-487P-201ENST00000365430 104 ntBASIC3.28□□□□□ -1.88
PER3P56645 SNORD14.1-201ENST00000365609 90 ntBASIC3.28□□□□□ -1.88
PER3P56645 Y_RNA.424-201ENST00000384063 103 ntBASIC3.28□□□□□ -1.88
PER3P56645 SNORA48.2-201ENST00000390926 124 ntBASIC3.28□□□□□ -1.88
PER3P56645 MIR190B-201ENST00000401119 79 ntBASIC3.28□□□□□ -1.88
PER3P56645 MTCYBP2-201ENST00000407745 171 ntBASIC3.28□□□□□ -1.88
PER3P56645 RNU6-1140P-201ENST00000410517 106 ntBASIC3.28□□□□□ -1.88
PER3P56645 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.28□□□□□ -1.88
PER3P56645 IPO7P1-201ENST00000442031 636 ntBASIC3.28□□□□□ -1.88
PER3P56645 RN7SL442P-201ENST00000473804 320 ntBASIC3.28□□□□□ -1.88
PER3P56645 TRBV12-2-201ENST00000489763 344 ntBASIC3.28□□□□□ -1.88
PER3P56645 RN7SKP209-201ENST00000516888 304 ntBASIC3.28□□□□□ -1.88
PER3P56645 AC040926.1-201ENST00000530195 238 ntBASIC3.28□□□□□ -1.88
PER3P56645 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.28□□□□□ -1.88
PER3P56645 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.28□□□□□ -1.88
PER3P56645 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.28□□□□□ -1.88
PER3P56645 Z98751.3-201ENST00000604447 521 ntBASIC3.28□□□□□ -1.88
PER3P56645 AC124312.5-201ENST00000604451 268 ntBASIC3.28□□□□□ -1.88
PER3P56645 AL356157.2-201ENST00000605122 111 ntBASIC3.28□□□□□ -1.88
PER3P56645 RNU1-30P-201ENST00000606575 163 ntBASIC3.28□□□□□ -1.88
PER3P56645 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.28□□□□□ -1.88
PER3P56645 SCARNA4-201ENST00000629045 128 ntBASIC3.28□□□□□ -1.88
PER3P56645 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PER3P56645 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.28□□□□□ -1.88
PER3P56645 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.28□□□□□ -1.88
PER3P56645 AL513302.2-201ENST00000562313 1842 ntBASIC3.28□□□□□ -1.88
PER3P56645 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PER3P56645 PWAR6-201ENST00000552334 4618 ntBASIC3.28□□□□□ -1.89
PER3P56645 AC010889.1-201ENST00000566193 2666 ntBASIC3.27□□□□□ -1.89
PER3P56645 AL365361.1-201ENST00000566942 3481 ntBASIC3.27□□□□□ -1.89
PER3P56645 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.27□□□□□ -1.89
PER3P56645 AP000560.1-201ENST00000624150 1937 ntBASIC3.27□□□□□ -1.89
PER3P56645 AC004944.1-201ENST00000517807 3059 ntBASIC3.27□□□□□ -1.89
PER3P56645 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PER3P56645 Y_RNA.47-201ENST00000362697 108 ntBASIC3.27□□□□□ -1.89
PER3P56645 RNU5B-2P-201ENST00000363036 113 ntBASIC3.27□□□□□ -1.89
PER3P56645 RNU4-9P-201ENST00000364951 139 ntBASIC3.27□□□□□ -1.89
PER3P56645 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.27□□□□□ -1.89
PER3P56645 AP002088.1-201ENST00000382740 395 ntBASIC3.27□□□□□ -1.89
PER3P56645 SNORA29-201ENST00000384183 140 ntBASIC3.27□□□□□ -1.89
PER3P56645 RNU6-708P-201ENST00000384217 107 ntBASIC3.27□□□□□ -1.89
PER3P56645 MIR128-1-201ENST00000384921 82 ntBASIC3.27□□□□□ -1.89
PER3P56645 SAR1AP2-201ENST00000392696 594 ntBASIC3.27□□□□□ -1.89
PER3P56645 DPH3P2-201ENST00000422618 250 ntBASIC3.27□□□□□ -1.89
PER3P56645 PTGES3P4-201ENST00000426243 356 ntBASIC3.27□□□□□ -1.89
PER3P56645 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.27□□□□□ -1.89
PER3P56645 AC004383.1-201ENST00000438135 289 ntBASIC3.27□□□□□ -1.89
PER3P56645 RPL21P2-201ENST00000440049 481 ntBASIC3.27□□□□□ -1.89
PER3P56645 snoU13.30-201ENST00000458951 104 ntBASIC3.27□□□□□ -1.89
PER3P56645 RPS27P29-201ENST00000463110 252 ntBASIC3.27□□□□□ -1.89
PER3P56645 RPS26P21-201ENST00000475397 348 ntBASIC3.27□□□□□ -1.89
PER3P56645 AC104564.1-201ENST00000493028 407 ntBASIC3.27□□□□□ -1.89
PER3P56645 AC093852.1-201ENST00000503587 266 ntBASIC3.27□□□□□ -1.89
PER3P56645 RNU5F-8P-201ENST00000515941 111 ntBASIC3.27□□□□□ -1.89
PER3P56645 RNU2-27P-201ENST00000516185 142 ntBASIC3.27□□□□□ -1.89
PER3P56645 RNU6-911P-201ENST00000516523 104 ntBASIC3.27□□□□□ -1.89
PER3P56645 SNORA31.21-201ENST00000517180 77 ntBASIC3.27□□□□□ -1.89
PER3P56645 IGHV3-76-201ENST00000522465 295 ntBASIC3.27□□□□□ -1.89
PER3P56645 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.27□□□□□ -1.89
PER3P56645 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.27□□□□□ -1.89
PER3P56645 TGIF1P1-201ENST00000558095 802 ntBASIC3.27□□□□□ -1.89
PER3P56645 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.27□□□□□ -1.89
PER3P56645 AL021879.1-201ENST00000611756 288 ntBASIC3.27□□□□□ -1.89
PER3P56645 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.27□□□□□ -1.89
PER3P56645 AL138825.1-201ENST00000618587 192 ntBASIC3.27□□□□□ -1.89
PER3P56645 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
PER3P56645 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.27□□□□□ -1.89
PER3P56645 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.26□□□□□ -1.89
PER3P56645 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.26□□□□□ -1.89
PER3P56645 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PER3P56645 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.26□□□□□ -1.89
PER3P56645 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PER3P56645 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
PER3P56645 AC233263.6-201ENST00000631132 1963 ntBASIC3.26□□□□□ -1.89
PER3P56645 SNORD9-201ENST00000362566 104 ntBASIC3.26□□□□□ -1.89
PER3P56645 RNU6-1141P-201ENST00000364520 107 ntBASIC3.26□□□□□ -1.89
PER3P56645 RNU6-805P-201ENST00000365643 106 ntBASIC3.26□□□□□ -1.89
PER3P56645 Y_RNA.380-201ENST00000365663 111 ntBASIC3.26□□□□□ -1.89
PER3P56645 SNORA36A-201ENST00000384221 132 ntBASIC3.26□□□□□ -1.89
PER3P56645 RNU6-196P-201ENST00000384315 107 ntBASIC3.26□□□□□ -1.89
PER3P56645 MIR490-201ENST00000384865 128 ntBASIC3.26□□□□□ -1.89
PER3P56645 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
PER3P56645 RNU6-750P-201ENST00000390946 107 ntBASIC3.26□□□□□ -1.89
PER3P56645 MIR1252-201ENST00000408861 65 ntBASIC3.26□□□□□ -1.89
PER3P56645 RNA5SP390-201ENST00000410191 113 ntBASIC3.26□□□□□ -1.89
PER3P56645 RNA5SP293-201ENST00000410527 113 ntBASIC3.26□□□□□ -1.89
PER3P56645 EIF1AXP1-201ENST00000419267 435 ntBASIC3.26□□□□□ -1.89
PER3P56645 AC009296.1-201ENST00000443146 155 ntBASIC3.26□□□□□ -1.89
PER3P56645 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.26□□□□□ -1.89
PER3P56645 U8.22-201ENST00000459141 133 ntBASIC3.26□□□□□ -1.89
PER3P56645 SNRPGP7-201ENST00000469016 106 ntBASIC3.26□□□□□ -1.89
PER3P56645 RPL30P12-201ENST00000474666 353 ntBASIC3.26□□□□□ -1.89
PER3P56645 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.26□□□□□ -1.89
PER3P56645 AC110794.1-201ENST00000505816 425 ntBASIC3.26□□□□□ -1.89
PER3P56645 RNU7-175P-201ENST00000515915 61 ntBASIC3.26□□□□□ -1.89
PER3P56645 Y_RNA.715-201ENST00000517082 110 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms