Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.21□□□□□ -2.06
PEX3P56589 POLHP1-201ENST00000411806 470 ntBASIC2.21□□□□□ -2.06
PEX3P56589 HMGB3P2-201ENST00000411913 584 ntBASIC2.21□□□□□ -2.06
PEX3P56589 OR9R1P-201ENST00000412200 877 ntBASIC2.21□□□□□ -2.06
PEX3P56589 AL117339.3-201ENST00000418733 162 ntBASIC2.21□□□□□ -2.06
PEX3P56589 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.21□□□□□ -2.06
PEX3P56589 RPL23AP7-203ENST00000449021 469 ntBASIC2.21□□□□□ -2.06
PEX3P56589 RNU6-189P-201ENST00000516120 101 ntBASIC2.21□□□□□ -2.06
PEX3P56589 RNU6-1038P-201ENST00000516516 104 ntBASIC2.21□□□□□ -2.06
PEX3P56589 RNU6-1069P-201ENST00000516612 133 ntBASIC2.21□□□□□ -2.06
PEX3P56589 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.21□□□□□ -2.06
PEX3P56589 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.21□□□□□ -2.06
PEX3P56589 MIR4298-201ENST00000584380 73 ntBASIC2.21□□□□□ -2.06
PEX3P56589 AC010525.2-201ENST00000590920 195 ntBASIC2.21□□□□□ -2.06
PEX3P56589 SNRPGP19-201ENST00000603826 189 ntBASIC2.21□□□□□ -2.06
PEX3P56589 AC092807.2-201ENST00000609367 243 ntBASIC2.21□□□□□ -2.06
PEX3P56589 DISC2.1-201ENST00000612827 205 ntBASIC2.21□□□□□ -2.06
PEX3P56589 AL359854.1-201ENST00000614203 1594 ntBASIC2.21□□□□□ -2.06
PEX3P56589 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.21□□□□□ -2.06
PEX3P56589 RBBP8P1-201ENST00000449447 1844 ntBASIC2.21□□□□□ -2.06
PEX3P56589 AL596028.1-201ENST00000326971 197 ntBASIC2.2□□□□□ -2.06
PEX3P56589 SNORD114-1-201ENST00000362705 72 ntBASIC2.2□□□□□ -2.06
PEX3P56589 Y_RNA.89-201ENST00000363031 102 ntBASIC2.2□□□□□ -2.06
PEX3P56589 RNU4-66P-201ENST00000365199 138 ntBASIC2.2□□□□□ -2.06
PEX3P56589 MIR147B-201ENST00000390185 80 ntBASIC2.2□□□□□ -2.06
PEX3P56589 RNA5SP219-201ENST00000390940 113 ntBASIC2.2□□□□□ -2.06
PEX3P56589 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PEX3P56589 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.2□□□□□ -2.06
PEX3P56589 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.2□□□□□ -2.06
PEX3P56589 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.2□□□□□ -2.06
PEX3P56589 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PEX3P56589 AL121601.2-201ENST00000438019 707 ntBASIC2.2□□□□□ -2.06
PEX3P56589 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.2□□□□□ -2.06
PEX3P56589 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.2□□□□□ -2.06
PEX3P56589 FGF7P6-202ENST00000451282 293 ntBASIC2.2□□□□□ -2.06
PEX3P56589 AC025033.1-201ENST00000463883 194 ntBASIC2.2□□□□□ -2.06
PEX3P56589 RPL21P99-201ENST00000480369 423 ntBASIC2.2□□□□□ -2.06
PEX3P56589 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.2□□□□□ -2.06
PEX3P56589 Y_RNA.665-201ENST00000516177 98 ntBASIC2.2□□□□□ -2.06
PEX3P56589 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.2□□□□□ -2.06
PEX3P56589 COX6CP5-201ENST00000527162 228 ntBASIC2.2□□□□□ -2.06
PEX3P56589 CYCSP27-201ENST00000527643 293 ntBASIC2.2□□□□□ -2.06
PEX3P56589 MIR5089-201ENST00000580047 84 ntBASIC2.2□□□□□ -2.06
PEX3P56589 AC009314.1-201ENST00000603871 304 ntBASIC2.2□□□□□ -2.06
PEX3P56589 AC104458.1-201ENST00000608243 463 ntBASIC2.2□□□□□ -2.06
PEX3P56589 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.2□□□□□ -2.06
PEX3P56589 MIR3529-201ENST00000637713 78 ntBASIC2.2□□□□□ -2.06
PEX3P56589 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
PEX3P56589 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.2□□□□□ -2.06
PEX3P56589 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.2□□□□□ -2.06
PEX3P56589 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
PEX3P56589 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
PEX3P56589 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
PEX3P56589 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.19□□□□□ -2.06
PEX3P56589 RNU6-37P-201ENST00000362692 107 ntBASIC2.19□□□□□ -2.06
PEX3P56589 RNU6-11P-201ENST00000364234 107 ntBASIC2.19□□□□□ -2.06
PEX3P56589 RNU4-12P-201ENST00000365233 139 ntBASIC2.19□□□□□ -2.06
PEX3P56589 RNU6-25P-201ENST00000383873 107 ntBASIC2.19□□□□□ -2.06
PEX3P56589 RNU6-1-201ENST00000383898 107 ntBASIC2.19□□□□□ -2.06
PEX3P56589 RNU6-48P-201ENST00000384161 107 ntBASIC2.19□□□□□ -2.06
PEX3P56589 RNU6-36P-201ENST00000384172 107 ntBASIC2.19□□□□□ -2.06
PEX3P56589 RNU6-4P-201ENST00000384205 107 ntBASIC2.19□□□□□ -2.06
PEX3P56589 RNU6-5P-201ENST00000384238 107 ntBASIC2.19□□□□□ -2.06
PEX3P56589 RNU6-3P-201ENST00000384314 107 ntBASIC2.19□□□□□ -2.06
PEX3P56589 RNU6-16P-201ENST00000384385 107 ntBASIC2.19□□□□□ -2.06
PEX3P56589 SNORD116-20-201ENST00000384529 92 ntBASIC2.19□□□□□ -2.06
PEX3P56589 RNU6-15P-201ENST00000384534 107 ntBASIC2.19□□□□□ -2.06
PEX3P56589 RNU6-2-201ENST00000384627 107 ntBASIC2.19□□□□□ -2.06
PEX3P56589 RNU6-29P-201ENST00000384637 107 ntBASIC2.19□□□□□ -2.06
PEX3P56589 RNU6-9-201ENST00000384776 107 ntBASIC2.19□□□□□ -2.06
PEX3P56589 RNU6-33P-201ENST00000384793 107 ntBASIC2.19□□□□□ -2.06
PEX3P56589 RNU6-220P-201ENST00000390919 107 ntBASIC2.19□□□□□ -2.06
PEX3P56589 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.19□□□□□ -2.06
PEX3P56589 Y_RNA.619-201ENST00000410951 90 ntBASIC2.19□□□□□ -2.06
PEX3P56589 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.19□□□□□ -2.06
PEX3P56589 AC074117.2-201ENST00000417130 397 ntBASIC2.19□□□□□ -2.06
PEX3P56589 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.19□□□□□ -2.06
PEX3P56589 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.19□□□□□ -2.06
PEX3P56589 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.19□□□□□ -2.06
PEX3P56589 RPL30P4-201ENST00000429309 333 ntBASIC2.19□□□□□ -2.06
PEX3P56589 ERLEC1P1-201ENST00000433806 578 ntBASIC2.19□□□□□ -2.06
PEX3P56589 HMGB1P31-201ENST00000437242 427 ntBASIC2.19□□□□□ -2.06
PEX3P56589 AC007969.2-201ENST00000441891 191 ntBASIC2.19□□□□□ -2.06
PEX3P56589 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.19□□□□□ -2.06
PEX3P56589 RNU7-66P-201ENST00000459469 62 ntBASIC2.19□□□□□ -2.06
PEX3P56589 AC079140.5-201ENST00000507882 310 ntBASIC2.19□□□□□ -2.06
PEX3P56589 AC009127.3-201ENST00000570531 403 ntBASIC2.19□□□□□ -2.06
PEX3P56589 AC090897.2-201ENST00000581715 130 ntBASIC2.19□□□□□ -2.06
PEX3P56589 MIR3117-201ENST00000584034 78 ntBASIC2.19□□□□□ -2.06
PEX3P56589 MIR3616-201ENST00000584070 92 ntBASIC2.19□□□□□ -2.06
PEX3P56589 AC002984.1-201ENST00000591692 448 ntBASIC2.19□□□□□ -2.06
PEX3P56589 AC092747.3-201ENST00000603769 301 ntBASIC2.19□□□□□ -2.06
PEX3P56589 AC021646.1-201ENST00000605469 484 ntBASIC2.19□□□□□ -2.06
PEX3P56589 RNU6-6P-201ENST00000606623 107 ntBASIC2.19□□□□□ -2.06
PEX3P56589 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.19□□□□□ -2.06
PEX3P56589 MIR7157-201ENST00000635801 60 ntBASIC2.19□□□□□ -2.06
PEX3P56589 AC024614.3-201ENST00000637860 256 ntBASIC2.19□□□□□ -2.06
PEX3P56589 MTND5P30-201ENST00000452896 1731 ntBASIC2.19□□□□□ -2.06
PEX3P56589 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
PEX3P56589 RNU6-105P-201ENST00000363909 104 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms