Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.5□□□□□ -1.85
GFRA1P56159 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.5□□□□□ -1.85
GFRA1P56159 AC010095.1-201ENST00000443543 144 ntBASIC3.5□□□□□ -1.85
GFRA1P56159 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.5□□□□□ -1.85
GFRA1P56159 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.5□□□□□ -1.85
GFRA1P56159 AC073901.1-201ENST00000462471 408 ntBASIC3.5□□□□□ -1.85
GFRA1P56159 SEPT14P8-201ENST00000508026 178 ntBASIC3.5□□□□□ -1.85
GFRA1P56159 SNORA40.9-201ENST00000515895 93 ntBASIC3.5□□□□□ -1.85
GFRA1P56159 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.5□□□□□ -1.85
GFRA1P56159 Y_RNA.683-201ENST00000516508 93 ntBASIC3.5□□□□□ -1.85
GFRA1P56159 CYCSP23-201ENST00000519781 313 ntBASIC3.5□□□□□ -1.85
GFRA1P56159 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.5□□□□□ -1.85
GFRA1P56159 AK6P2-201ENST00000549020 471 ntBASIC3.5□□□□□ -1.85
GFRA1P56159 AC034105.4-201ENST00000568304 277 ntBASIC3.5□□□□□ -1.85
GFRA1P56159 AC025946.2-201ENST00000603398 234 ntBASIC3.5□□□□□ -1.85
GFRA1P56159 AC012603.1-201ENST00000606424 528 ntBASIC3.5□□□□□ -1.85
GFRA1P56159 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
GFRA1P56159 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
GFRA1P56159 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.5□□□□□ -1.85
GFRA1P56159 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.5□□□□□ -1.85
GFRA1P56159 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
GFRA1P56159 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
GFRA1P56159 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
GFRA1P56159 LINC02471-203ENST00000641941 4752 ntBASIC3.5□□□□□ -1.85
GFRA1P56159 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.49□□□□□ -1.85
GFRA1P56159 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.49□□□□□ -1.85
GFRA1P56159 HSPA8P1-201ENST00000425843 1833 ntBASIC3.49□□□□□ -1.85
GFRA1P56159 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
GFRA1P56159 Y_RNA.16-201ENST00000362421 102 ntBASIC3.49□□□□□ -1.85
GFRA1P56159 Y_RNA.40-201ENST00000362645 93 ntBASIC3.49□□□□□ -1.85
GFRA1P56159 Y_RNA.179-201ENST00000363844 90 ntBASIC3.49□□□□□ -1.85
GFRA1P56159 CBX3P9-201ENST00000402326 552 ntBASIC3.49□□□□□ -1.85
GFRA1P56159 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.49□□□□□ -1.85
GFRA1P56159 AL390729.2-201ENST00000416137 156 ntBASIC3.49□□□□□ -1.85
GFRA1P56159 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.49□□□□□ -1.85
GFRA1P56159 AC112771.1-201ENST00000463581 102 ntBASIC3.49□□□□□ -1.85
GFRA1P56159 AC117440.1-201ENST00000474107 571 ntBASIC3.49□□□□□ -1.85
GFRA1P56159 RPL26P26-201ENST00000480251 434 ntBASIC3.49□□□□□ -1.85
GFRA1P56159 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.49□□□□□ -1.85
GFRA1P56159 RNU7-110P-201ENST00000516891 62 ntBASIC3.49□□□□□ -1.85
GFRA1P56159 SCARNA14-201ENST00000516903 136 ntBASIC3.49□□□□□ -1.85
GFRA1P56159 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.49□□□□□ -1.85
GFRA1P56159 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.49□□□□□ -1.85
GFRA1P56159 AC087499.8-201ENST00000578406 226 ntBASIC3.49□□□□□ -1.85
GFRA1P56159 SNRPGP20-201ENST00000604477 205 ntBASIC3.49□□□□□ -1.85
GFRA1P56159 AL591424.2-201ENST00000617023 128 ntBASIC3.49□□□□□ -1.85
GFRA1P56159 AC034229.5-201ENST00000624258 185 ntBASIC3.49□□□□□ -1.85
GFRA1P56159 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.49□□□□□ -1.85
GFRA1P56159 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
GFRA1P56159 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.49□□□□□ -1.85
GFRA1P56159 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.49□□□□□ -1.85
GFRA1P56159 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
GFRA1P56159 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
GFRA1P56159 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
GFRA1P56159 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
GFRA1P56159 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
GFRA1P56159 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.48□□□□□ -1.85
GFRA1P56159 Y_RNA.54-201ENST00000362766 105 ntBASIC3.48□□□□□ -1.85
GFRA1P56159 RNU6-655P-201ENST00000362858 107 ntBASIC3.48□□□□□ -1.85
GFRA1P56159 RNU6-1210P-201ENST00000363775 107 ntBASIC3.48□□□□□ -1.85
GFRA1P56159 RNU6-102P-201ENST00000384485 104 ntBASIC3.48□□□□□ -1.85
GFRA1P56159 RNU1-57P-201ENST00000384491 166 ntBASIC3.48□□□□□ -1.85
GFRA1P56159 MIR186-201ENST00000384988 86 ntBASIC3.48□□□□□ -1.85
GFRA1P56159 SNORA53-201ENST00000391141 249 ntBASIC3.48□□□□□ -1.85
GFRA1P56159 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.48□□□□□ -1.85
GFRA1P56159 SETP5-201ENST00000437270 562 ntBASIC3.48□□□□□ -1.85
GFRA1P56159 AC007395.1-201ENST00000451333 677 ntBASIC3.48□□□□□ -1.85
GFRA1P56159 RPL23AP62-201ENST00000463396 453 ntBASIC3.48□□□□□ -1.85
GFRA1P56159 RN7SL542P-201ENST00000467147 294 ntBASIC3.48□□□□□ -1.85
GFRA1P56159 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.48□□□□□ -1.85
GFRA1P56159 RPL36AP48-201ENST00000485521 314 ntBASIC3.48□□□□□ -1.85
GFRA1P56159 HMGB3P17-201ENST00000504195 649 ntBASIC3.48□□□□□ -1.85
GFRA1P56159 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.48□□□□□ -1.85
GFRA1P56159 SCARNA24.2-201ENST00000516968 130 ntBASIC3.48□□□□□ -1.85
GFRA1P56159 RNU6-111P-201ENST00000517179 105 ntBASIC3.48□□□□□ -1.85
GFRA1P56159 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.48□□□□□ -1.85
GFRA1P56159 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.48□□□□□ -1.85
GFRA1P56159 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.48□□□□□ -1.85
GFRA1P56159 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.48□□□□□ -1.85
GFRA1P56159 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.48□□□□□ -1.85
GFRA1P56159 AC037487.3-201ENST00000606668 112 ntBASIC3.48□□□□□ -1.85
GFRA1P56159 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.48□□□□□ -1.85
GFRA1P56159 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
GFRA1P56159 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
GFRA1P56159 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.48□□□□□ -1.85
GFRA1P56159 AP001486.2-201ENST00000561652 5113 ntBASIC3.48□□□□□ -1.85
GFRA1P56159 MTND5P35-201ENST00000557537 1720 ntBASIC3.47□□□□□ -1.85
GFRA1P56159 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
GFRA1P56159 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.47□□□□□ -1.85
GFRA1P56159 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
GFRA1P56159 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.47□□□□□ -1.85
GFRA1P56159 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
GFRA1P56159 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
GFRA1P56159 RNU6-626P-201ENST00000363354 107 ntBASIC3.47□□□□□ -1.85
GFRA1P56159 Y_RNA.230-201ENST00000364348 109 ntBASIC3.47□□□□□ -1.85
GFRA1P56159 SNORA14A-201ENST00000364773 135 ntBASIC3.47□□□□□ -1.85
GFRA1P56159 RNU6-20P-201ENST00000384106 107 ntBASIC3.47□□□□□ -1.85
GFRA1P56159 RNU6-793P-201ENST00000384233 104 ntBASIC3.47□□□□□ -1.85
GFRA1P56159 MIR554-201ENST00000384874 96 ntBASIC3.47□□□□□ -1.85
GFRA1P56159 AL603910.2-201ENST00000407268 136 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms