Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AL353193.1-201ENST00000421444 268 ntBASIC2.17□□□□□ -2.06
VCPP55072 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.17□□□□□ -2.06
VCPP55072 RNU7-63P-201ENST00000459054 62 ntBASIC2.17□□□□□ -2.06
VCPP55072 RNA5SP233-201ENST00000459153 113 ntBASIC2.17□□□□□ -2.06
VCPP55072 MED28P2-201ENST00000475771 317 ntBASIC2.17□□□□□ -2.06
VCPP55072 AL163540.1-201ENST00000485382 386 ntBASIC2.17□□□□□ -2.06
VCPP55072 RPL23AP63-201ENST00000498752 471 ntBASIC2.17□□□□□ -2.06
VCPP55072 LRRC34P2-201ENST00000514850 553 ntBASIC2.17□□□□□ -2.06
VCPP55072 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.17□□□□□ -2.06
VCPP55072 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.17□□□□□ -2.06
VCPP55072 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.17□□□□□ -2.06
VCPP55072 MIR3126-201ENST00000577443 74 ntBASIC2.17□□□□□ -2.06
VCPP55072 AC007229.1-201ENST00000590455 412 ntBASIC2.17□□□□□ -2.06
VCPP55072 AL355297.2-201ENST00000604792 129 ntBASIC2.17□□□□□ -2.06
VCPP55072 RNU6-91P-201ENST00000607774 107 ntBASIC2.17□□□□□ -2.06
VCPP55072 Y_RNA.783-201ENST00000613546 102 ntBASIC2.17□□□□□ -2.06
VCPP55072 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.17□□□□□ -2.06
VCPP55072 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.17□□□□□ -2.06
VCPP55072 AP003400.5-201ENST00000624827 617 ntBASIC2.17□□□□□ -2.06
VCPP55072 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.17□□□□□ -2.06
VCPP55072 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.17□□□□□ -2.06
VCPP55072 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.17□□□□□ -2.06
VCPP55072 KPNA2P1-201ENST00000458289 1591 ntBASIC2.16□□□□□ -2.06
VCPP55072 RNU6-393P-201ENST00000384475 107 ntBASIC2.16□□□□□ -2.06
VCPP55072 RNU6-903P-201ENST00000391270 109 ntBASIC2.16□□□□□ -2.06
VCPP55072 RAP1BP3-201ENST00000407180 549 ntBASIC2.16□□□□□ -2.06
VCPP55072 RNA5SP338-201ENST00000410495 85 ntBASIC2.16□□□□□ -2.06
VCPP55072 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.16□□□□□ -2.06
VCPP55072 AC097463.2-201ENST00000421074 142 ntBASIC2.16□□□□□ -2.06
VCPP55072 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.16□□□□□ -2.06
VCPP55072 RPL7P43-201ENST00000478876 753 ntBASIC2.16□□□□□ -2.06
VCPP55072 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.16□□□□□ -2.06
VCPP55072 MTND2P33-201ENST00000506452 1031 ntBASIC2.16□□□□□ -2.06
VCPP55072 RNA5SP490-201ENST00000517141 136 ntBASIC2.16□□□□□ -2.06
VCPP55072 RNU2-19P-201ENST00000517288 84 ntBASIC2.16□□□□□ -2.06
VCPP55072 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.16□□□□□ -2.06
VCPP55072 CR383656.8-201ENST00000549046 145 ntBASIC2.16□□□□□ -2.06
VCPP55072 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.16□□□□□ -2.06
VCPP55072 AGGF1P4-201ENST00000568249 801 ntBASIC2.16□□□□□ -2.06
VCPP55072 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.16□□□□□ -2.06
VCPP55072 AC103987.3-201ENST00000582071 292 ntBASIC2.16□□□□□ -2.06
VCPP55072 AC008749.1-201ENST00000597650 306 ntBASIC2.16□□□□□ -2.06
VCPP55072 AC012507.3-201ENST00000603556 477 ntBASIC2.16□□□□□ -2.06
VCPP55072 AC026585.1-201ENST00000619582 524 ntBASIC2.16□□□□□ -2.06
VCPP55072 SDR42E1P4-201ENST00000620894 481 ntBASIC2.16□□□□□ -2.06
VCPP55072 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.16□□□□□ -2.06
VCPP55072 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.16□□□□□ -2.06
VCPP55072 AC244517.12-201ENST00000623581 663 ntBASIC2.16□□□□□ -2.06
VCPP55072 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
VCPP55072 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
VCPP55072 RNU6-661P-201ENST00000362409 107 ntBASIC2.15□□□□□ -2.07
VCPP55072 RNU6-552P-201ENST00000362869 119 ntBASIC2.15□□□□□ -2.07
VCPP55072 RNU6-996P-201ENST00000365438 107 ntBASIC2.15□□□□□ -2.07
VCPP55072 Y_RNA.436-201ENST00000384097 102 ntBASIC2.15□□□□□ -2.07
VCPP55072 RNU6-517P-201ENST00000384362 110 ntBASIC2.15□□□□□ -2.07
VCPP55072 RNU6-1127P-201ENST00000384580 107 ntBASIC2.15□□□□□ -2.07
VCPP55072 SNORD70.1-201ENST00000391007 85 ntBASIC2.15□□□□□ -2.07
VCPP55072 RNU6-1158P-201ENST00000391167 107 ntBASIC2.15□□□□□ -2.07
VCPP55072 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.15□□□□□ -2.07
VCPP55072 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.15□□□□□ -2.07
VCPP55072 MTCYBP8-201ENST00000422855 651 ntBASIC2.15□□□□□ -2.07
VCPP55072 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.15□□□□□ -2.07
VCPP55072 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.15□□□□□ -2.07
VCPP55072 SNRPFP3-201ENST00000457792 225 ntBASIC2.15□□□□□ -2.07
VCPP55072 SCARNA18-201ENST00000459004 134 ntBASIC2.15□□□□□ -2.07
VCPP55072 SNORD13-201ENST00000459299 104 ntBASIC2.15□□□□□ -2.07
VCPP55072 AC112771.1-201ENST00000463581 102 ntBASIC2.15□□□□□ -2.07
VCPP55072 Y_RNA.670-201ENST00000516255 105 ntBASIC2.15□□□□□ -2.07
VCPP55072 RNU1-40P-201ENST00000516816 164 ntBASIC2.15□□□□□ -2.07
VCPP55072 RNU1-97P-201ENST00000516872 164 ntBASIC2.15□□□□□ -2.07
VCPP55072 AP003034.1-201ENST00000534621 422 ntBASIC2.15□□□□□ -2.07
VCPP55072 AC079598.5-201ENST00000547460 117 ntBASIC2.15□□□□□ -2.07
VCPP55072 AC110588.1-201ENST00000559699 137 ntBASIC2.15□□□□□ -2.07
VCPP55072 MTCYBP33-201ENST00000575007 1130 ntBASIC2.15□□□□□ -2.07
VCPP55072 MIR4448-201ENST00000584360 86 ntBASIC2.15□□□□□ -2.07
VCPP55072 AC078795.2-201ENST00000602835 1252 ntBASIC2.15□□□□□ -2.07
VCPP55072 AC009314.1-201ENST00000603871 304 ntBASIC2.15□□□□□ -2.07
VCPP55072 AP001596.2-201ENST00000608410 312 ntBASIC2.15□□□□□ -2.07
VCPP55072 AC017083.3-201ENST00000609955 700 ntBASIC2.15□□□□□ -2.07
VCPP55072 AL354950.2-201ENST00000617939 290 ntBASIC2.15□□□□□ -2.07
VCPP55072 MIR5739-201ENST00000619803 80 ntBASIC2.15□□□□□ -2.07
VCPP55072 MIR3529-201ENST00000637713 78 ntBASIC2.15□□□□□ -2.07
VCPP55072 MTND4P14-201ENST00000435799 1354 ntBASIC2.14□□□□□ -2.07
VCPP55072 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
VCPP55072 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.14□□□□□ -2.07
VCPP55072 RNA5SP138-201ENST00000365098 114 ntBASIC2.14□□□□□ -2.07
VCPP55072 Y_RNA.381-201ENST00000365666 102 ntBASIC2.14□□□□□ -2.07
VCPP55072 RNU6-434P-201ENST00000384376 107 ntBASIC2.14□□□□□ -2.07
VCPP55072 RNU6-843P-201ENST00000384454 104 ntBASIC2.14□□□□□ -2.07
VCPP55072 RPL21P1-201ENST00000399532 476 ntBASIC2.14□□□□□ -2.07
VCPP55072 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.14□□□□□ -2.07
VCPP55072 EDDM3CP-201ENST00000415977 425 ntBASIC2.14□□□□□ -2.07
VCPP55072 DLGAP5P1-201ENST00000430307 464 ntBASIC2.14□□□□□ -2.07
VCPP55072 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.14□□□□□ -2.07
VCPP55072 AL606489.2-201ENST00000433886 234 ntBASIC2.14□□□□□ -2.07
VCPP55072 DNAJC19P4-201ENST00000440115 345 ntBASIC2.14□□□□□ -2.07
VCPP55072 AC073415.1-201ENST00000449240 153 ntBASIC2.14□□□□□ -2.07
VCPP55072 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.14□□□□□ -2.07
VCPP55072 AC012308.1-201ENST00000451232 178 ntBASIC2.14□□□□□ -2.07
VCPP55072 AC006026.2-201ENST00000457376 180 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms