Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.9□□□□□ -1.95
PMS2P54278 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
PMS2P54278 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.89□□□□□ -1.95
PMS2P54278 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
PMS2P54278 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PMS2P54278 SNORA63-201ENST00000363450 132 ntBASIC2.89□□□□□ -1.95
PMS2P54278 Y_RNA.197-201ENST00000364004 102 ntBASIC2.89□□□□□ -1.95
PMS2P54278 SNORD56-201ENST00000413522 71 ntBASIC2.89□□□□□ -1.95
PMS2P54278 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.89□□□□□ -1.95
PMS2P54278 OSTCP8-201ENST00000445117 448 ntBASIC2.89□□□□□ -1.95
PMS2P54278 AC013470.1-201ENST00000453438 462 ntBASIC2.89□□□□□ -1.95
PMS2P54278 Y_RNA.653-201ENST00000459091 95 ntBASIC2.89□□□□□ -1.95
PMS2P54278 MTCYBP40-201ENST00000509390 1135 ntBASIC2.89□□□□□ -1.95
PMS2P54278 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.89□□□□□ -1.95
PMS2P54278 RNU1-54P-201ENST00000517181 120 ntBASIC2.89□□□□□ -1.95
PMS2P54278 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PMS2P54278 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.89□□□□□ -1.95
PMS2P54278 AL121821.2-201ENST00000556081 394 ntBASIC2.89□□□□□ -1.95
PMS2P54278 SNRPGP17-201ENST00000603780 214 ntBASIC2.89□□□□□ -1.95
PMS2P54278 KPNA2P1-201ENST00000458289 1591 ntBASIC2.88□□□□□ -1.95
PMS2P54278 CDC27P3-201ENST00000635418 1910 ntBASIC2.88□□□□□ -1.95
PMS2P54278 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PMS2P54278 Y_RNA.146-201ENST00000363549 102 ntBASIC2.88□□□□□ -1.95
PMS2P54278 RNU6-596P-201ENST00000365395 98 ntBASIC2.88□□□□□ -1.95
PMS2P54278 Z98749.2-208ENST00000381646 500 ntBASIC2.88□□□□□ -1.95
PMS2P54278 RNU6-474P-201ENST00000384243 107 ntBASIC2.88□□□□□ -1.95
PMS2P54278 MIR592-201ENST00000384959 97 ntBASIC2.88□□□□□ -1.95
PMS2P54278 MIR34A-201ENST00000385130 110 ntBASIC2.88□□□□□ -1.95
PMS2P54278 SNORD73A-201ENST00000386062 65 ntBASIC2.88□□□□□ -1.95
PMS2P54278 SNORA75.4-201ENST00000391278 119 ntBASIC2.88□□□□□ -1.95
PMS2P54278 AL590004.1-201ENST00000405321 300 ntBASIC2.88□□□□□ -1.95
PMS2P54278 RNU6-1050P-201ENST00000410388 107 ntBASIC2.88□□□□□ -1.95
PMS2P54278 AL030996.1-201ENST00000411430 235 ntBASIC2.88□□□□□ -1.95
PMS2P54278 AL513477.1-202ENST00000417061 214 ntBASIC2.88□□□□□ -1.95
PMS2P54278 AC022018.1-201ENST00000430685 241 ntBASIC2.88□□□□□ -1.95
PMS2P54278 AL513043.1-201ENST00000439124 535 ntBASIC2.88□□□□□ -1.95
PMS2P54278 AL161651.1-201ENST00000440882 223 ntBASIC2.88□□□□□ -1.95
PMS2P54278 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.88□□□□□ -1.95
PMS2P54278 RNU7-187P-201ENST00000458985 68 ntBASIC2.88□□□□□ -1.95
PMS2P54278 AC097473.1-201ENST00000508142 408 ntBASIC2.88□□□□□ -1.95
PMS2P54278 MRPS36P2-201ENST00000512569 299 ntBASIC2.88□□□□□ -1.95
PMS2P54278 AC093303.1-201ENST00000514549 295 ntBASIC2.88□□□□□ -1.95
PMS2P54278 Y_RNA.708-201ENST00000516950 96 ntBASIC2.88□□□□□ -1.95
PMS2P54278 AC109479.2-201ENST00000517842 174 ntBASIC2.88□□□□□ -1.95
PMS2P54278 AC026241.1-201ENST00000517873 2142 ntBASIC2.88□□□□□ -1.95
PMS2P54278 CPDP1-201ENST00000579660 283 ntBASIC2.88□□□□□ -1.95
PMS2P54278 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.88□□□□□ -1.95
PMS2P54278 AC080078.3-201ENST00000605407 463 ntBASIC2.88□□□□□ -1.95
PMS2P54278 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.88□□□□□ -1.95
PMS2P54278 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.88□□□□□ -1.95
PMS2P54278 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.88□□□□□ -1.95
PMS2P54278 MTND5P10-201ENST00000603719 1809 ntBASIC2.88□□□□□ -1.95
PMS2P54278 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PMS2P54278 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
PMS2P54278 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PMS2P54278 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
PMS2P54278 MIR26A1-201ENST00000362205 77 ntBASIC2.87□□□□□ -1.95
PMS2P54278 RNU6-310P-201ENST00000384655 107 ntBASIC2.87□□□□□ -1.95
PMS2P54278 MIR10A-201ENST00000385043 110 ntBASIC2.87□□□□□ -1.95
PMS2P54278 AL445529.1-201ENST00000398713 389 ntBASIC2.87□□□□□ -1.95
PMS2P54278 FO393413.1-201ENST00000402892 195 ntBASIC2.87□□□□□ -1.95
PMS2P54278 EEF1A1P41-201ENST00000414667 207 ntBASIC2.87□□□□□ -1.95
PMS2P54278 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.87□□□□□ -1.95
PMS2P54278 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
PMS2P54278 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.87□□□□□ -1.95
PMS2P54278 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.87□□□□□ -1.95
PMS2P54278 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
PMS2P54278 MTCO3P10-201ENST00000455912 772 ntBASIC2.87□□□□□ -1.95
PMS2P54278 RPL23AP45-201ENST00000476406 468 ntBASIC2.87□□□□□ -1.95
PMS2P54278 RN7SL429P-201ENST00000479090 223 ntBASIC2.87□□□□□ -1.95
PMS2P54278 RN7SL489P-201ENST00000486185 223 ntBASIC2.87□□□□□ -1.95
PMS2P54278 RN7SL327P-201ENST00000488659 223 ntBASIC2.87□□□□□ -1.95
PMS2P54278 RNA5SP356-201ENST00000515972 94 ntBASIC2.87□□□□□ -1.95
PMS2P54278 Y_RNA.670-201ENST00000516255 105 ntBASIC2.87□□□□□ -1.95
PMS2P54278 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.87□□□□□ -1.95
PMS2P54278 AC004486.1-201ENST00000546846 233 ntBASIC2.87□□□□□ -1.95
PMS2P54278 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.87□□□□□ -1.95
PMS2P54278 RN7SL853P-201ENST00000617250 223 ntBASIC2.87□□□□□ -1.95
PMS2P54278 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.87□□□□□ -1.95
PMS2P54278 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.87□□□□□ -1.95
PMS2P54278 AL669831.3-213ENST00000636676 183 ntBASIC2.87□□□□□ -1.95
PMS2P54278 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
PMS2P54278 RNU6-37P-201ENST00000362692 107 ntBASIC2.86□□□□□ -1.95
PMS2P54278 RNU6-11P-201ENST00000364234 107 ntBASIC2.86□□□□□ -1.95
PMS2P54278 RNU6-1280P-201ENST00000365211 107 ntBASIC2.86□□□□□ -1.95
PMS2P54278 RNU6-898P-201ENST00000365627 104 ntBASIC2.86□□□□□ -1.95
PMS2P54278 RNU6-25P-201ENST00000383873 107 ntBASIC2.86□□□□□ -1.95
PMS2P54278 RNU6-1-201ENST00000383898 107 ntBASIC2.86□□□□□ -1.95
PMS2P54278 RNU6-48P-201ENST00000384161 107 ntBASIC2.86□□□□□ -1.95
PMS2P54278 RNU6-36P-201ENST00000384172 107 ntBASIC2.86□□□□□ -1.95
PMS2P54278 RNU6-4P-201ENST00000384205 107 ntBASIC2.86□□□□□ -1.95
PMS2P54278 RNU6-5P-201ENST00000384238 107 ntBASIC2.86□□□□□ -1.95
PMS2P54278 RNU6-3P-201ENST00000384314 107 ntBASIC2.86□□□□□ -1.95
PMS2P54278 RNU6-16P-201ENST00000384385 107 ntBASIC2.86□□□□□ -1.95
PMS2P54278 RNU6-15P-201ENST00000384534 107 ntBASIC2.86□□□□□ -1.95
PMS2P54278 RNU6-2-201ENST00000384627 107 ntBASIC2.86□□□□□ -1.95
PMS2P54278 RNU6-29P-201ENST00000384637 107 ntBASIC2.86□□□□□ -1.95
PMS2P54278 RNU6-9-201ENST00000384776 107 ntBASIC2.86□□□□□ -1.95
PMS2P54278 RNU6-33P-201ENST00000384793 107 ntBASIC2.86□□□□□ -1.95
PMS2P54278 MIR518D-201ENST00000385014 87 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 190 ms