Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 MTCO3P45-201ENST00000443036 613 ntBASIC-0.7□□□□□ -2.52
CLTCL1P53675 RAC1P7-201ENST00000445367 377 ntBASIC-0.7□□□□□ -2.52
CLTCL1P53675 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC-0.7□□□□□ -2.52
CLTCL1P53675 Y_RNA.654-201ENST00000497848 106 ntBASIC-0.7□□□□□ -2.52
CLTCL1P53675 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC-0.7□□□□□ -2.52
CLTCL1P53675 AC087685.1-201ENST00000587507 141 ntBASIC-0.7□□□□□ -2.52
CLTCL1P53675 AC021506.2-201ENST00000612354 169 ntBASIC-0.7□□□□□ -2.52
CLTCL1P53675 PLD1-217ENST00000627725 174 ntTSL 5 BASIC-0.7□□□□□ -2.52
CLTCL1P53675 Y_RNA.132-201ENST00000363421 102 ntBASIC-0.71□□□□□ -2.52
CLTCL1P53675 RNY3-201ENST00000365484 102 ntBASIC-0.71□□□□□ -2.52
CLTCL1P53675 RNU6-611P-201ENST00000384276 104 ntBASIC-0.71□□□□□ -2.52
CLTCL1P53675 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC-0.71□□□□□ -2.52
CLTCL1P53675 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC-0.71□□□□□ -2.52
CLTCL1P53675 RPL18AP17-201ENST00000455326 198 ntBASIC-0.71□□□□□ -2.52
CLTCL1P53675 RNU7-90P-201ENST00000459216 62 ntBASIC-0.71□□□□□ -2.52
CLTCL1P53675 SNORA25.12-201ENST00000516202 82 ntBASIC-0.71□□□□□ -2.52
CLTCL1P53675 RNU6-1004P-201ENST00000516584 111 ntBASIC-0.71□□□□□ -2.52
CLTCL1P53675 RNU5A-4P-201ENST00000516588 111 ntBASIC-0.71□□□□□ -2.52
CLTCL1P53675 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC-0.71□□□□□ -2.52
CLTCL1P53675 AC023157.2-201ENST00000540596 141 ntBASIC-0.71□□□□□ -2.52
CLTCL1P53675 ROCK1P1-201ENST00000573767 549 ntBASIC-0.71□□□□□ -2.52
CLTCL1P53675 AL031176.1-201ENST00000604554 466 ntBASIC-0.71□□□□□ -2.52
CLTCL1P53675 NDUFA8P1-201ENST00000605525 367 ntBASIC-0.71□□□□□ -2.52
CLTCL1P53675 AC090116.1-201ENST00000615679 446 ntBASIC-0.71□□□□□ -2.52
CLTCL1P53675 RNA5SP493-201ENST00000364115 91 ntBASIC-0.71□□□□□ -2.52
CLTCL1P53675 RNY1P8-201ENST00000383970 114 ntBASIC-0.71□□□□□ -2.52
CLTCL1P53675 RNU6-163P-201ENST00000384396 106 ntBASIC-0.71□□□□□ -2.52
CLTCL1P53675 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.71□□□□□ -2.52
CLTCL1P53675 NDUFA5P10-201ENST00000432147 357 ntBASIC-0.71□□□□□ -2.52
CLTCL1P53675 ZNF736P6Y-201ENST00000447526 1213 ntBASIC-0.71□□□□□ -2.52
CLTCL1P53675 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC-0.71□□□□□ -2.52
CLTCL1P53675 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC-0.71□□□□□ -2.52
CLTCL1P53675 AL355816.2-201ENST00000610049 647 ntBASIC-0.71□□□□□ -2.52
CLTCL1P53675 SNORA18.1-201ENST00000363418 128 ntBASIC-0.72□□□□□ -2.52
CLTCL1P53675 AC007435.1-201ENST00000421086 415 ntBASIC-0.72□□□□□ -2.52
CLTCL1P53675 AC098831.1-201ENST00000440661 216 ntBASIC-0.72□□□□□ -2.52
CLTCL1P53675 AC004865.1-201ENST00000442276 1003 ntBASIC-0.72□□□□□ -2.52
CLTCL1P53675 RPS20P24-201ENST00000457473 361 ntBASIC-0.72□□□□□ -2.52
CLTCL1P53675 HMGB1P28-201ENST00000507778 552 ntBASIC-0.72□□□□□ -2.52
CLTCL1P53675 RNU5A-7P-201ENST00000515979 116 ntBASIC-0.72□□□□□ -2.52
CLTCL1P53675 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC-0.72□□□□□ -2.52
CLTCL1P53675 AC025423.2-201ENST00000537570 439 ntBASIC-0.72□□□□□ -2.52
CLTCL1P53675 LSM6P2-201ENST00000552208 177 ntBASIC-0.72□□□□□ -2.52
CLTCL1P53675 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.72□□□□□ -2.52
CLTCL1P53675 AC012213.3-201ENST00000577199 777 ntBASIC-0.72□□□□□ -2.52
CLTCL1P53675 AC117490.2-201ENST00000610042 594 ntBASIC-0.72□□□□□ -2.52
CLTCL1P53675 AP005212.4-201ENST00000614206 710 ntBASIC-0.72□□□□□ -2.52
CLTCL1P53675 ATM-228ENST00000639240 498 ntTSL 5 BASIC-0.72□□□□□ -2.52
CLTCL1P53675 RNU6-697P-201ENST00000363348 107 ntBASIC-0.73□□□□□ -2.53
CLTCL1P53675 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC-0.73□□□□□ -2.53
CLTCL1P53675 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC-0.73□□□□□ -2.53
CLTCL1P53675 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC-0.73□□□□□ -2.53
CLTCL1P53675 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.73□□□□□ -2.53
CLTCL1P53675 HIGD1AP17-201ENST00000554576 276 ntBASIC-0.73□□□□□ -2.53
CLTCL1P53675 AC005021.1-201ENST00000608730 355 ntBASIC-0.73□□□□□ -2.53
CLTCL1P53675 MIR548AZ-201ENST00000616567 95 ntBASIC-0.73□□□□□ -2.53
CLTCL1P53675 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.73□□□□□ -2.53
CLTCL1P53675 CASC19-280ENST00000642102 1351 ntBASIC-0.73□□□□□ -2.53
CLTCL1P53675 SNORD14C-201ENST00000365382 88 ntBASIC-0.74□□□□□ -2.53
CLTCL1P53675 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC-0.74□□□□□ -2.53
CLTCL1P53675 MIR135A2-201ENST00000384854 100 ntBASIC-0.74□□□□□ -2.53
CLTCL1P53675 MIR593-201ENST00000384856 100 ntBASIC-0.74□□□□□ -2.53
CLTCL1P53675 MTCO2P8-201ENST00000412213 658 ntBASIC-0.74□□□□□ -2.53
CLTCL1P53675 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.74□□□□□ -2.53
CLTCL1P53675 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC-0.74□□□□□ -2.53
CLTCL1P53675 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC-0.74□□□□□ -2.53
CLTCL1P53675 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.74□□□□□ -2.53
CLTCL1P53675 RN7SL660P-201ENST00000614852 299 ntBASIC-0.74□□□□□ -2.53
CLTCL1P53675 U6.48-201ENST00000618523 106 ntBASIC-0.74□□□□□ -2.53
CLTCL1P53675 RNU1-39P-201ENST00000383897 165 ntBASIC-0.75□□□□□ -2.53
CLTCL1P53675 RNU6-452P-201ENST00000384406 107 ntBASIC-0.75□□□□□ -2.53
CLTCL1P53675 RNU6-929P-201ENST00000384429 107 ntBASIC-0.75□□□□□ -2.53
CLTCL1P53675 RNU6-140P-201ENST00000384566 108 ntBASIC-0.75□□□□□ -2.53
CLTCL1P53675 USP9YP19-201ENST00000412165 485 ntBASIC-0.75□□□□□ -2.53
CLTCL1P53675 USP9YP13-201ENST00000417797 480 ntBASIC-0.75□□□□□ -2.53
CLTCL1P53675 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.75□□□□□ -2.53
CLTCL1P53675 AC105185.1-201ENST00000518705 535 ntBASIC-0.75□□□□□ -2.53
CLTCL1P53675 AC004987.4-201ENST00000603383 338 ntBASIC-0.75□□□□□ -2.53
CLTCL1P53675 AC012213.4-201ENST00000606457 354 ntBASIC-0.75□□□□□ -2.53
CLTCL1P53675 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.75□□□□□ -2.53
CLTCL1P53675 MIR198-201ENST00000637333 62 ntBASIC-0.75□□□□□ -2.53
CLTCL1P53675 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC-0.75□□□□□ -2.53
CLTCL1P53675 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.75□□□□□ -2.53
CLTCL1P53675 AL096829.2-201ENST00000446582 742 ntBASIC-0.75□□□□□ -2.53
CLTCL1P53675 MTND1P3-201ENST00000484956 952 ntBASIC-0.75□□□□□ -2.53
CLTCL1P53675 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.75□□□□□ -2.53
CLTCL1P53675 AC126365.2-201ENST00000580630 379 ntBASIC-0.75□□□□□ -2.53
CLTCL1P53675 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC-0.75□□□□□ -2.53
CLTCL1P53675 AC092447.9-201ENST00000603395 144 ntBASIC-0.75□□□□□ -2.53
CLTCL1P53675 AL031281.1-201ENST00000604049 488 ntBASIC-0.75□□□□□ -2.53
CLTCL1P53675 AC025588.3-201ENST00000604182 274 ntBASIC-0.75□□□□□ -2.53
CLTCL1P53675 AC011939.3-201ENST00000613686 466 ntBASIC-0.75□□□□□ -2.53
CLTCL1P53675 FTX_2.1-201ENST00000618816 94 ntBASIC-0.75□□□□□ -2.53
CLTCL1P53675 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC-0.75□□□□□ -2.53
CLTCL1P53675 AL157786.1-207ENST00000627771 695 ntBASIC-0.75□□□□□ -2.53
CLTCL1P53675 MTND1P28-201ENST00000435623 950 ntBASIC-0.76□□□□□ -2.53
CLTCL1P53675 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC-0.76□□□□□ -2.53
CLTCL1P53675 AP001324.2-201ENST00000461163 319 ntBASIC-0.76□□□□□ -2.53
CLTCL1P53675 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC-0.76□□□□□ -2.53
CLTCL1P53675 MIR3169-201ENST00000578032 83 ntBASIC-0.76□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms