Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 RNU6-944P-201ENST00000364023 107 ntBASIC5.28□□□□□ -1.56
NUBP1P53384 RNU6-279P-201ENST00000391297 101 ntBASIC5.28□□□□□ -1.56
NUBP1P53384 HMGN2P8-201ENST00000391458 268 ntBASIC5.28□□□□□ -1.56
NUBP1P53384 RN7SKP156-201ENST00000410308 342 ntBASIC5.28□□□□□ -1.56
NUBP1P53384 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.28□□□□□ -1.56
NUBP1P53384 PPBPP1-201ENST00000510807 373 ntBASIC5.28□□□□□ -1.56
NUBP1P53384 ENPP7P9-201ENST00000514456 627 ntBASIC5.28□□□□□ -1.56
NUBP1P53384 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.28□□□□□ -1.56
NUBP1P53384 AC022254.1-201ENST00000567857 235 ntBASIC5.28□□□□□ -1.56
NUBP1P53384 AC022217.4-201ENST00000604389 163 ntBASIC5.28□□□□□ -1.56
NUBP1P53384 AL359075.3-201ENST00000613288 217 ntBASIC5.28□□□□□ -1.56
NUBP1P53384 AL591926.8-201ENST00000616876 211 ntBASIC5.28□□□□□ -1.56
NUBP1P53384 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
NUBP1P53384 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.28□□□□□ -1.56
NUBP1P53384 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
NUBP1P53384 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NUBP1P53384 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
NUBP1P53384 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NUBP1P53384 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NUBP1P53384 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
NUBP1P53384 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NUBP1P53384 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
NUBP1P53384 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
NUBP1P53384 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.27□□□□□ -1.57
NUBP1P53384 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.27□□□□□ -1.57
NUBP1P53384 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.27□□□□□ -1.57
NUBP1P53384 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NUBP1P53384 RNU6-1279P-201ENST00000383917 103 ntBASIC5.27□□□□□ -1.57
NUBP1P53384 RNU6-1189P-201ENST00000383958 107 ntBASIC5.27□□□□□ -1.57
NUBP1P53384 RNY1P6-201ENST00000384193 109 ntBASIC5.27□□□□□ -1.57
NUBP1P53384 MIR518F-201ENST00000384973 87 ntBASIC5.27□□□□□ -1.57
NUBP1P53384 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.27□□□□□ -1.57
NUBP1P53384 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.27□□□□□ -1.57
NUBP1P53384 AL356218.2-201ENST00000605264 187 ntBASIC5.27□□□□□ -1.57
NUBP1P53384 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
NUBP1P53384 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NUBP1P53384 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
NUBP1P53384 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
NUBP1P53384 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NUBP1P53384 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
NUBP1P53384 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NUBP1P53384 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
NUBP1P53384 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC5.26□□□□□ -1.57
NUBP1P53384 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NUBP1P53384 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.26□□□□□ -1.57
NUBP1P53384 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.26□□□□□ -1.57
NUBP1P53384 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
NUBP1P53384 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.26□□□□□ -1.57
NUBP1P53384 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
NUBP1P53384 SNORD1C-201ENST00000363315 78 ntBASIC5.26□□□□□ -1.57
NUBP1P53384 RN7SKP153-201ENST00000365026 316 ntBASIC5.26□□□□□ -1.57
NUBP1P53384 MIR802-201ENST00000390235 94 ntBASIC5.26□□□□□ -1.57
NUBP1P53384 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
NUBP1P53384 MIR1253-201ENST00000408273 105 ntBASIC5.26□□□□□ -1.57
NUBP1P53384 AC073261.1-201ENST00000429409 121 ntBASIC5.26□□□□□ -1.57
NUBP1P53384 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.26□□□□□ -1.57
NUBP1P53384 MIR4277-201ENST00000578298 84 ntBASIC5.26□□□□□ -1.57
NUBP1P53384 AC002076.2-201ENST00000617362 122 ntBASIC5.26□□□□□ -1.57
NUBP1P53384 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.26□□□□□ -1.57
NUBP1P53384 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NUBP1P53384 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NUBP1P53384 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
NUBP1P53384 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.26□□□□□ -1.57
NUBP1P53384 AC011266.1-201ENST00000624119 3569 ntBASIC5.26□□□□□ -1.57
NUBP1P53384 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NUBP1P53384 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.25□□□□□ -1.57
NUBP1P53384 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NUBP1P53384 Y_RNA.507-201ENST00000384500 99 ntBASIC5.25□□□□□ -1.57
NUBP1P53384 RNU1-131P-201ENST00000458943 161 ntBASIC5.25□□□□□ -1.57
NUBP1P53384 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.25□□□□□ -1.57
NUBP1P53384 RNU7-61P-201ENST00000515897 61 ntBASIC5.25□□□□□ -1.57
NUBP1P53384 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.25□□□□□ -1.57
NUBP1P53384 MIR92B-201ENST00000607575 96 ntBASIC5.25□□□□□ -1.57
NUBP1P53384 MIR6716-201ENST00000613413 80 ntBASIC5.25□□□□□ -1.57
NUBP1P53384 MIR376A2-201ENST00000636782 80 ntBASIC5.25□□□□□ -1.57
NUBP1P53384 FAM35DP-201ENST00000323387 2712 ntBASIC5.25□□□□□ -1.57
NUBP1P53384 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
NUBP1P53384 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NUBP1P53384 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NUBP1P53384 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC5.25□□□□□ -1.57
NUBP1P53384 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NUBP1P53384 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NUBP1P53384 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NUBP1P53384 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
NUBP1P53384 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NUBP1P53384 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NUBP1P53384 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NUBP1P53384 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
NUBP1P53384 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.24□□□□□ -1.57
NUBP1P53384 GVINP1-202ENST00000531871 7271 ntBASIC5.24□□□□□ -1.57
NUBP1P53384 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
NUBP1P53384 RNU6-1099P-201ENST00000363533 107 ntBASIC5.24□□□□□ -1.57
NUBP1P53384 Y_RNA.253-201ENST00000364562 112 ntBASIC5.24□□□□□ -1.57
NUBP1P53384 RNU1-133P-201ENST00000364867 167 ntBASIC5.24□□□□□ -1.57
NUBP1P53384 RNA5SP104-201ENST00000410989 118 ntBASIC5.24□□□□□ -1.57
NUBP1P53384 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.24□□□□□ -1.57
NUBP1P53384 AC233266.1-201ENST00000454518 96 ntBASIC5.24□□□□□ -1.57
NUBP1P53384 AC010099.1-201ENST00000455434 375 ntBASIC5.24□□□□□ -1.57
NUBP1P53384 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.24□□□□□ -1.57
NUBP1P53384 AP000867.2-201ENST00000532468 320 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 148.8 ms