Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.28□□□□□ -1.72
RNF144AP50876 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4.28□□□□□ -1.72
RNF144AP50876 NDUFS5P3-201ENST00000450668 321 ntBASIC4.28□□□□□ -1.72
RNF144AP50876 AL645939.1-201ENST00000453429 797 ntBASIC4.28□□□□□ -1.72
RNF144AP50876 RN7SL354P-201ENST00000469282 294 ntBASIC4.28□□□□□ -1.72
RNF144AP50876 SNORA70.12-201ENST00000516084 153 ntBASIC4.28□□□□□ -1.72
RNF144AP50876 RNU6-1061P-201ENST00000516530 99 ntBASIC4.28□□□□□ -1.72
RNF144AP50876 AC105129.1-201ENST00000560250 297 ntBASIC4.28□□□□□ -1.72
RNF144AP50876 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.28□□□□□ -1.72
RNF144AP50876 AC120024.3-201ENST00000603167 156 ntBASIC4.28□□□□□ -1.72
RNF144AP50876 AC025754.2-201ENST00000606491 432 ntBASIC4.28□□□□□ -1.72
RNF144AP50876 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RNF144AP50876 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RNF144AP50876 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RNF144AP50876 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.28□□□□□ -1.73
RNF144AP50876 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.27□□□□□ -1.73
RNF144AP50876 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RNF144AP50876 AC007496.3-201ENST00000624987 3443 ntBASIC4.27□□□□□ -1.73
RNF144AP50876 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
RNF144AP50876 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.27□□□□□ -1.73
RNF144AP50876 MAPK10-263ENST00000641052 4307 ntBASIC4.27□□□□□ -1.73
RNF144AP50876 SNORA7.2-201ENST00000364446 145 ntBASIC4.27□□□□□ -1.73
RNF144AP50876 U8.7-201ENST00000364940 136 ntBASIC4.27□□□□□ -1.73
RNF144AP50876 SNORD116-21-201ENST00000384507 92 ntBASIC4.27□□□□□ -1.73
RNF144AP50876 PTMAP5-201ENST00000393073 333 ntBASIC4.27□□□□□ -1.73
RNF144AP50876 RNA5SP504-201ENST00000410676 117 ntBASIC4.27□□□□□ -1.73
RNF144AP50876 CYCSP48-201ENST00000417124 323 ntBASIC4.27□□□□□ -1.73
RNF144AP50876 AIMP1P2-201ENST00000425294 312 ntBASIC4.27□□□□□ -1.73
RNF144AP50876 AL158147.1-201ENST00000443970 75 ntBASIC4.27□□□□□ -1.73
RNF144AP50876 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.27□□□□□ -1.73
RNF144AP50876 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC4.27□□□□□ -1.73
RNF144AP50876 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.27□□□□□ -1.73
RNF144AP50876 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.27□□□□□ -1.73
RNF144AP50876 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.27□□□□□ -1.73
RNF144AP50876 MIR378D2-201ENST00000580636 98 ntBASIC4.27□□□□□ -1.73
RNF144AP50876 MIR4480-201ENST00000582492 71 ntBASIC4.27□□□□□ -1.73
RNF144AP50876 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.27□□□□□ -1.73
RNF144AP50876 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.27□□□□□ -1.73
RNF144AP50876 A2MP1-204ENST00000566278 4130 ntBASIC4.27□□□□□ -1.73
RNF144AP50876 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
RNF144AP50876 AC008555.8-201ENST00000623602 2168 ntBASIC4.27□□□□□ -1.73
RNF144AP50876 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC4.27□□□□□ -1.73
RNF144AP50876 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.27□□□□□ -1.73
RNF144AP50876 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RNF144AP50876 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
RNF144AP50876 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RNF144AP50876 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RNF144AP50876 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.26□□□□□ -1.73
RNF144AP50876 SNORD45.3-201ENST00000363836 72 ntBASIC4.26□□□□□ -1.73
RNF144AP50876 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.26□□□□□ -1.73
RNF144AP50876 RN7SKP100-201ENST00000411258 284 ntBASIC4.26□□□□□ -1.73
RNF144AP50876 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.26□□□□□ -1.73
RNF144AP50876 AC245047.4-201ENST00000433189 144 ntBASIC4.26□□□□□ -1.73
RNF144AP50876 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.26□□□□□ -1.73
RNF144AP50876 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.26□□□□□ -1.73
RNF144AP50876 AC117454.1-201ENST00000491120 168 ntBASIC4.26□□□□□ -1.73
RNF144AP50876 RPS23P1-201ENST00000491662 432 ntBASIC4.26□□□□□ -1.73
RNF144AP50876 EIF4A1P12-201ENST00000551910 141 ntBASIC4.26□□□□□ -1.73
RNF144AP50876 AC209154.1-201ENST00000582156 337 ntBASIC4.26□□□□□ -1.73
RNF144AP50876 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RNF144AP50876 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RNF144AP50876 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RNF144AP50876 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.25□□□□□ -1.73
RNF144AP50876 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
RNF144AP50876 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
RNF144AP50876 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RNF144AP50876 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
RNF144AP50876 MIR659-201ENST00000384963 97 ntBASIC4.25□□□□□ -1.73
RNF144AP50876 MIR548A3-201ENST00000385297 97 ntBASIC4.25□□□□□ -1.73
RNF144AP50876 Y_RNA.630-201ENST00000411370 108 ntBASIC4.25□□□□□ -1.73
RNF144AP50876 AC016831.4-201ENST00000438302 307 ntBASIC4.25□□□□□ -1.73
RNF144AP50876 HMGN2P21-201ENST00000447764 270 ntBASIC4.25□□□□□ -1.73
RNF144AP50876 RN7SL132P-201ENST00000478131 296 ntBASIC4.25□□□□□ -1.73
RNF144AP50876 AC093331.1-201ENST00000521474 169 ntBASIC4.25□□□□□ -1.73
RNF144AP50876 AL110118.1-201ENST00000553543 400 ntBASIC4.25□□□□□ -1.73
RNF144AP50876 AC091042.1-201ENST00000579213 173 ntBASIC4.25□□□□□ -1.73
RNF144AP50876 MIR4737-201ENST00000583979 81 ntBASIC4.25□□□□□ -1.73
RNF144AP50876 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.25□□□□□ -1.73
RNF144AP50876 AC112200.1-201ENST00000625015 234 ntBASIC4.25□□□□□ -1.73
RNF144AP50876 MIR3199-2-201ENST00000636243 86 ntBASIC4.25□□□□□ -1.73
RNF144AP50876 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RNF144AP50876 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
RNF144AP50876 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RNF144AP50876 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RNF144AP50876 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.25□□□□□ -1.73
RNF144AP50876 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.25□□□□□ -1.73
RNF144AP50876 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.24□□□□□ -1.73
RNF144AP50876 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.24□□□□□ -1.73
RNF144AP50876 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.24□□□□□ -1.73
RNF144AP50876 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF144AP50876 Z82209.1-201ENST00000422141 2135 ntBASIC4.24□□□□□ -1.73
RNF144AP50876 U8.1-201ENST00000362843 134 ntBASIC4.24□□□□□ -1.73
RNF144AP50876 Y_RNA.361-201ENST00000365515 120 ntBASIC4.24□□□□□ -1.73
RNF144AP50876 SNORA18.2-201ENST00000383865 132 ntBASIC4.24□□□□□ -1.73
RNF144AP50876 RNA5SP239-201ENST00000410218 129 ntBASIC4.24□□□□□ -1.73
RNF144AP50876 RNA5SP201-201ENST00000410316 124 ntBASIC4.24□□□□□ -1.73
RNF144AP50876 SNORA36B-201ENST00000410438 131 ntBASIC4.24□□□□□ -1.73
RNF144AP50876 AL139281.1-201ENST00000422120 335 ntBASIC4.24□□□□□ -1.73
RNF144AP50876 Z74021.1-201ENST00000423610 407 ntBASIC4.24□□□□□ -1.73
RNF144AP50876 AL691449.1-201ENST00000426570 421 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 201.1 ms