Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 SNORD50.1-201ENST00000362987 71 ntBASIC3.24□□□□□ -1.89
CLK3P49761 RNU6-384P-201ENST00000364900 104 ntBASIC3.24□□□□□ -1.89
CLK3P49761 RNU6-827P-201ENST00000365553 106 ntBASIC3.24□□□□□ -1.89
CLK3P49761 Y_RNA.439-201ENST00000384119 94 ntBASIC3.24□□□□□ -1.89
CLK3P49761 RNU6-217P-201ENST00000384164 104 ntBASIC3.24□□□□□ -1.89
CLK3P49761 RNU6-662P-201ENST00000384253 104 ntBASIC3.24□□□□□ -1.89
CLK3P49761 RNU6-1035P-201ENST00000384477 107 ntBASIC3.24□□□□□ -1.89
CLK3P49761 RNU6-1025P-201ENST00000410629 104 ntBASIC3.24□□□□□ -1.89
CLK3P49761 AL139156.1-201ENST00000412785 841 ntBASIC3.24□□□□□ -1.89
CLK3P49761 AC126124.2-201ENST00000413542 321 ntBASIC3.24□□□□□ -1.89
CLK3P49761 RPS29P4-201ENST00000414733 161 ntBASIC3.24□□□□□ -1.89
CLK3P49761 AC093578.1-201ENST00000415219 368 ntBASIC3.24□□□□□ -1.89
CLK3P49761 AL158156.1-201ENST00000422509 473 ntBASIC3.24□□□□□ -1.89
CLK3P49761 HMGN2P20-201ENST00000437531 273 ntBASIC3.24□□□□□ -1.89
CLK3P49761 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.24□□□□□ -1.89
CLK3P49761 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.24□□□□□ -1.89
CLK3P49761 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.24□□□□□ -1.89
CLK3P49761 SNORA70.19-201ENST00000516717 90 ntBASIC3.24□□□□□ -1.89
CLK3P49761 AC022868.1-201ENST00000517767 391 ntBASIC3.24□□□□□ -1.89
CLK3P49761 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.24□□□□□ -1.89
CLK3P49761 AC104027.1-201ENST00000521887 300 ntBASIC3.24□□□□□ -1.89
CLK3P49761 DEFB108E-201ENST00000524692 240 ntBASIC3.24□□□□□ -1.89
CLK3P49761 AC084851.1-201ENST00000529105 249 ntBASIC3.24□□□□□ -1.89
CLK3P49761 AL590705.4-201ENST00000532209 134 ntBASIC3.24□□□□□ -1.89
CLK3P49761 HSPE1P7-201ENST00000604681 321 ntBASIC3.24□□□□□ -1.89
CLK3P49761 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.24□□□□□ -1.89
CLK3P49761 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.24□□□□□ -1.89
CLK3P49761 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.24□□□□□ -1.89
CLK3P49761 AL450472.1-202ENST00000637286 180 ntBASIC3.24□□□□□ -1.89
CLK3P49761 AC009093.8-201ENST00000641769 292 ntBASIC3.24□□□□□ -1.89
CLK3P49761 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CLK3P49761 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CLK3P49761 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CLK3P49761 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.23□□□□□ -1.89
CLK3P49761 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CLK3P49761 Y_RNA.65-201ENST00000362846 100 ntBASIC3.23□□□□□ -1.89
CLK3P49761 Y_RNA.200-201ENST00000364018 102 ntBASIC3.23□□□□□ -1.89
CLK3P49761 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
CLK3P49761 Y_RNA.464-201ENST00000384282 110 ntBASIC3.23□□□□□ -1.89
CLK3P49761 MIR190B-201ENST00000401119 79 ntBASIC3.23□□□□□ -1.89
CLK3P49761 RPS29P13-201ENST00000402041 169 ntBASIC3.23□□□□□ -1.89
CLK3P49761 AL592148.1-201ENST00000413568 445 ntBASIC3.23□□□□□ -1.89
CLK3P49761 AL117339.3-201ENST00000418733 162 ntBASIC3.23□□□□□ -1.89
CLK3P49761 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.23□□□□□ -1.89
CLK3P49761 CYCSP4-201ENST00000429682 331 ntBASIC3.23□□□□□ -1.89
CLK3P49761 AL353705.1-201ENST00000433468 480 ntBASIC3.23□□□□□ -1.89
CLK3P49761 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.23□□□□□ -1.89
CLK3P49761 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.23□□□□□ -1.89
CLK3P49761 HMGN1P18-201ENST00000457642 277 ntBASIC3.23□□□□□ -1.89
CLK3P49761 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.23□□□□□ -1.89
CLK3P49761 RNA5SP385-201ENST00000515947 110 ntBASIC3.23□□□□□ -1.89
CLK3P49761 RNA5SP165-201ENST00000517142 115 ntBASIC3.23□□□□□ -1.89
CLK3P49761 AC026403.1-201ENST00000518938 295 ntBASIC3.23□□□□□ -1.89
CLK3P49761 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.23□□□□□ -1.89
CLK3P49761 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.23□□□□□ -1.89
CLK3P49761 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.23□□□□□ -1.89
CLK3P49761 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.23□□□□□ -1.89
CLK3P49761 AC093023.1-201ENST00000547375 507 ntBASIC3.23□□□□□ -1.89
CLK3P49761 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.23□□□□□ -1.89
CLK3P49761 MIR4300-201ENST00000581016 96 ntBASIC3.23□□□□□ -1.89
CLK3P49761 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.23□□□□□ -1.89
CLK3P49761 U3.45-201ENST00000607547 219 ntBASIC3.23□□□□□ -1.89
CLK3P49761 MIR376A1-201ENST00000616574 68 ntBASIC3.23□□□□□ -1.89
CLK3P49761 AC006111.3-201ENST00000622137 383 ntBASIC3.23□□□□□ -1.89
CLK3P49761 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.23□□□□□ -1.89
CLK3P49761 LINC02555-201ENST00000563933 1951 ntBASIC3.23□□□□□ -1.89
CLK3P49761 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.23□□□□□ -1.89
CLK3P49761 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
CLK3P49761 FAM35CP-201ENST00000554755 2470 ntBASIC3.22□□□□□ -1.89
CLK3P49761 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.22□□□□□ -1.89
CLK3P49761 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
CLK3P49761 AL359693.1-201ENST00000614959 2407 ntBASIC3.22□□□□□ -1.89
CLK3P49761 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
CLK3P49761 FTLP6-201ENST00000355274 422 ntBASIC3.22□□□□□ -1.89
CLK3P49761 RNA5SP124-201ENST00000362739 110 ntBASIC3.22□□□□□ -1.89
CLK3P49761 Y_RNA.54-201ENST00000362766 105 ntBASIC3.22□□□□□ -1.89
CLK3P49761 RNA5SP38-201ENST00000410750 119 ntBASIC3.22□□□□□ -1.89
CLK3P49761 RNU2-68P-201ENST00000410878 191 ntBASIC3.22□□□□□ -1.89
CLK3P49761 MTATP6P29-201ENST00000415057 132 ntBASIC3.22□□□□□ -1.89
CLK3P49761 AC091286.1-201ENST00000431233 461 ntBASIC3.22□□□□□ -1.89
CLK3P49761 SNRPEP9-201ENST00000436794 238 ntBASIC3.22□□□□□ -1.89
CLK3P49761 RPL23AP22-201ENST00000437556 453 ntBASIC3.22□□□□□ -1.89
CLK3P49761 HIGD1AP2-201ENST00000446367 280 ntBASIC3.22□□□□□ -1.89
CLK3P49761 AC079354.2-201ENST00000453523 154 ntBASIC3.22□□□□□ -1.89
CLK3P49761 RPL23AP45-201ENST00000476406 468 ntBASIC3.22□□□□□ -1.89
CLK3P49761 AC010469.2-201ENST00000496412 480 ntBASIC3.22□□□□□ -1.89
CLK3P49761 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.22□□□□□ -1.89
CLK3P49761 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.22□□□□□ -1.89
CLK3P49761 RNU6-1338P-201ENST00000516328 91 ntBASIC3.22□□□□□ -1.89
CLK3P49761 RNU6-928P-201ENST00000516876 104 ntBASIC3.22□□□□□ -1.89
CLK3P49761 MIR2355-201ENST00000517199 87 ntBASIC3.22□□□□□ -1.89
CLK3P49761 AC109479.2-201ENST00000517842 174 ntBASIC3.22□□□□□ -1.89
CLK3P49761 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.22□□□□□ -1.89
CLK3P49761 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.22□□□□□ -1.89
CLK3P49761 HIGD1AP1-201ENST00000550979 275 ntBASIC3.22□□□□□ -1.89
CLK3P49761 AC104581.2-201ENST00000572227 430 ntBASIC3.22□□□□□ -1.89
CLK3P49761 MIR3910-1-201ENST00000580936 111 ntBASIC3.22□□□□□ -1.89
CLK3P49761 FTX_3.1-201ENST00000610451 147 ntBASIC3.22□□□□□ -1.89
CLK3P49761 AL138880.2-201ENST00000616214 239 ntBASIC3.22□□□□□ -1.89
CLK3P49761 U4.6-201ENST00000621618 127 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 154 ms