Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 AC133134.1-201ENST00000466800 359 ntBASIC2.45□□□□□ -2.02
HOXA1P49639 RN7SL293P-201ENST00000481765 281 ntBASIC2.45□□□□□ -2.02
HOXA1P49639 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.45□□□□□ -2.02
HOXA1P49639 MRPS36P2-201ENST00000512569 299 ntBASIC2.45□□□□□ -2.02
HOXA1P49639 ACA59.1-201ENST00000515966 143 ntBASIC2.45□□□□□ -2.02
HOXA1P49639 RNA5SP82-201ENST00000516707 92 ntBASIC2.45□□□□□ -2.02
HOXA1P49639 MRPS36P4-201ENST00000534436 298 ntBASIC2.45□□□□□ -2.02
HOXA1P49639 AC010186.2-204ENST00000537668 439 ntBASIC2.45□□□□□ -2.02
HOXA1P49639 AC007458.1-201ENST00000542812 373 ntBASIC2.45□□□□□ -2.02
HOXA1P49639 CR383656.8-201ENST00000549046 145 ntBASIC2.45□□□□□ -2.02
HOXA1P49639 AC025281.1-201ENST00000567026 265 ntBASIC2.45□□□□□ -2.02
HOXA1P49639 AP001836.1-201ENST00000604675 523 ntBASIC2.45□□□□□ -2.02
HOXA1P49639 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.45□□□□□ -2.02
HOXA1P49639 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.44□□□□□ -2.02
HOXA1P49639 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HOXA1P49639 SNORD50.1-201ENST00000362987 71 ntBASIC2.44□□□□□ -2.02
HOXA1P49639 RNU1-33P-201ENST00000364249 162 ntBASIC2.44□□□□□ -2.02
HOXA1P49639 SNORD42.2-201ENST00000365570 69 ntBASIC2.44□□□□□ -2.02
HOXA1P49639 SNORD67-201ENST00000390833 111 ntBASIC2.44□□□□□ -2.02
HOXA1P49639 RNU4-47P-201ENST00000410876 114 ntBASIC2.44□□□□□ -2.02
HOXA1P49639 AC096664.2-201ENST00000411843 406 ntBASIC2.44□□□□□ -2.02
HOXA1P49639 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.44□□□□□ -2.02
HOXA1P49639 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.44□□□□□ -2.02
HOXA1P49639 DAP3P1-201ENST00000441522 278 ntBASIC2.44□□□□□ -2.02
HOXA1P49639 SNORA84-201ENST00000459229 133 ntBASIC2.44□□□□□ -2.02
HOXA1P49639 AC091153.1-201ENST00000466297 402 ntBASIC2.44□□□□□ -2.02
HOXA1P49639 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.44□□□□□ -2.02
HOXA1P49639 AC022493.2-201ENST00000506122 481 ntBASIC2.44□□□□□ -2.02
HOXA1P49639 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.44□□□□□ -2.02
HOXA1P49639 RNU5F-8P-201ENST00000515941 111 ntBASIC2.44□□□□□ -2.02
HOXA1P49639 RNU6-1170P-201ENST00000515974 106 ntBASIC2.44□□□□□ -2.02
HOXA1P49639 SNORA31.6-201ENST00000516241 130 ntBASIC2.44□□□□□ -2.02
HOXA1P49639 RNA5SP402-201ENST00000517148 110 ntBASIC2.44□□□□□ -2.02
HOXA1P49639 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.44□□□□□ -2.02
HOXA1P49639 AC020661.2-201ENST00000560114 134 ntBASIC2.44□□□□□ -2.02
HOXA1P49639 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.44□□□□□ -2.02
HOXA1P49639 MYL12BP1-201ENST00000569826 507 ntBASIC2.44□□□□□ -2.02
HOXA1P49639 MIR4273-201ENST00000582824 84 ntBASIC2.44□□□□□ -2.02
HOXA1P49639 AC012493.2-201ENST00000595083 291 ntBASIC2.44□□□□□ -2.02
HOXA1P49639 AC005014.2-201ENST00000607795 599 ntBASIC2.44□□□□□ -2.02
HOXA1P49639 MIR8076-201ENST00000611401 83 ntBASIC2.44□□□□□ -2.02
HOXA1P49639 AC084757.4-201ENST00000616350 526 ntBASIC2.44□□□□□ -2.02
HOXA1P49639 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.44□□□□□ -2.02
HOXA1P49639 MTND5P30-201ENST00000452896 1731 ntBASIC2.44□□□□□ -2.02
HOXA1P49639 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.44□□□□□ -2.02
HOXA1P49639 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HOXA1P49639 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HOXA1P49639 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
HOXA1P49639 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.43□□□□□ -2.02
HOXA1P49639 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.43□□□□□ -2.02
HOXA1P49639 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
HOXA1P49639 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
HOXA1P49639 RNU6-227P-201ENST00000362865 103 ntBASIC2.43□□□□□ -2.02
HOXA1P49639 RNU6-1040P-201ENST00000383974 107 ntBASIC2.43□□□□□ -2.02
HOXA1P49639 RNU6-843P-201ENST00000384454 104 ntBASIC2.43□□□□□ -2.02
HOXA1P49639 MIR490-201ENST00000384865 128 ntBASIC2.43□□□□□ -2.02
HOXA1P49639 MIR559-201ENST00000385188 96 ntBASIC2.43□□□□□ -2.02
HOXA1P49639 MIR147B-201ENST00000390185 80 ntBASIC2.43□□□□□ -2.02
HOXA1P49639 RNA5SP354-201ENST00000391247 136 ntBASIC2.43□□□□□ -2.02
HOXA1P49639 SNORA75.6-201ENST00000391318 127 ntBASIC2.43□□□□□ -2.02
HOXA1P49639 RNA5SP181-201ENST00000410246 98 ntBASIC2.43□□□□□ -2.02
HOXA1P49639 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.43□□□□□ -2.02
HOXA1P49639 AL513477.1-202ENST00000417061 214 ntBASIC2.43□□□□□ -2.02
HOXA1P49639 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
HOXA1P49639 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.43□□□□□ -2.02
HOXA1P49639 RPS15AP7-201ENST00000439294 405 ntBASIC2.43□□□□□ -2.02
HOXA1P49639 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.43□□□□□ -2.02
HOXA1P49639 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.43□□□□□ -2.02
HOXA1P49639 AC006026.2-201ENST00000457376 180 ntBASIC2.43□□□□□ -2.02
HOXA1P49639 AC107626.1-201ENST00000471084 183 ntBASIC2.43□□□□□ -2.02
HOXA1P49639 RPS29P2-201ENST00000479278 136 ntBASIC2.43□□□□□ -2.02
HOXA1P49639 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.43□□□□□ -2.02
HOXA1P49639 GZMAP1-201ENST00000503054 631 ntBASIC2.43□□□□□ -2.02
HOXA1P49639 AC022447.4-201ENST00000504053 364 ntBASIC2.43□□□□□ -2.02
HOXA1P49639 SCARNA17.1-201ENST00000516211 143 ntBASIC2.43□□□□□ -2.02
HOXA1P49639 SCARNA17.2-201ENST00000516334 143 ntBASIC2.43□□□□□ -2.02
HOXA1P49639 RNU1-104P-201ENST00000517280 175 ntBASIC2.43□□□□□ -2.02
HOXA1P49639 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.43□□□□□ -2.02
HOXA1P49639 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.43□□□□□ -2.02
HOXA1P49639 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.43□□□□□ -2.02
HOXA1P49639 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.43□□□□□ -2.02
HOXA1P49639 MIR4719-201ENST00000585233 84 ntBASIC2.43□□□□□ -2.02
HOXA1P49639 BNIP3P16-201ENST00000589779 534 ntBASIC2.43□□□□□ -2.02
HOXA1P49639 AC060766.3-201ENST00000591442 263 ntBASIC2.43□□□□□ -2.02
HOXA1P49639 AC018889.1-201ENST00000605372 397 ntBASIC2.43□□□□□ -2.02
HOXA1P49639 AC069200.1-201ENST00000609511 323 ntBASIC2.43□□□□□ -2.02
HOXA1P49639 SCARNA17.4-201ENST00000614296 143 ntBASIC2.43□□□□□ -2.02
HOXA1P49639 UCA1.1-201ENST00000620952 75 ntBASIC2.43□□□□□ -2.02
HOXA1P49639 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
HOXA1P49639 MTND5P1-201ENST00000445440 1375 ntBASIC2.43□□□□□ -2.02
HOXA1P49639 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
HOXA1P49639 AC009541.1-201ENST00000438279 2662 ntBASIC2.42□□□□□ -2.02
HOXA1P49639 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HOXA1P49639 SNORA67.1-201ENST00000364749 141 ntBASIC2.42□□□□□ -2.02
HOXA1P49639 U3.13-201ENST00000364804 214 ntBASIC2.42□□□□□ -2.02
HOXA1P49639 SNORD32A-201ENST00000364805 84 ntBASIC2.42□□□□□ -2.02
HOXA1P49639 Y_RNA.445-201ENST00000384168 102 ntBASIC2.42□□□□□ -2.02
HOXA1P49639 SNORA36A-201ENST00000384221 132 ntBASIC2.42□□□□□ -2.02
HOXA1P49639 RNU6-622P-201ENST00000384272 103 ntBASIC2.42□□□□□ -2.02
HOXA1P49639 SNORA48.7-201ENST00000391302 135 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms