Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 MIR3169-201ENST00000578032 83 ntBASIC-0.53□□□□□ -2.49
CPS1P31327 AL031667.3-201ENST00000620124 655 ntBASIC-0.53□□□□□ -2.49
CPS1P31327 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC-0.54□□□□□ -2.5
CPS1P31327 Y_RNA.99-201ENST00000363138 105 ntBASIC-0.54□□□□□ -2.5
CPS1P31327 MIR548B-201ENST00000385247 97 ntBASIC-0.54□□□□□ -2.5
CPS1P31327 RNA5SP111-201ENST00000411386 101 ntBASIC-0.54□□□□□ -2.5
CPS1P31327 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC-0.54□□□□□ -2.5
CPS1P31327 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC-0.54□□□□□ -2.5
CPS1P31327 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC-0.54□□□□□ -2.5
CPS1P31327 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC-0.54□□□□□ -2.5
CPS1P31327 AC100810.6-201ENST00000638068 285 ntBASIC-0.54□□□□□ -2.5
CPS1P31327 SNORA80D-201ENST00000384488 135 ntBASIC-0.54□□□□□ -2.5
CPS1P31327 SNORA32.3-201ENST00000384772 121 ntBASIC-0.54□□□□□ -2.5
CPS1P31327 MIR635-201ENST00000384830 98 ntBASIC-0.54□□□□□ -2.5
CPS1P31327 RNU4-63P-201ENST00000411313 118 ntBASIC-0.54□□□□□ -2.5
CPS1P31327 USP9YP19-201ENST00000412165 485 ntBASIC-0.54□□□□□ -2.5
CPS1P31327 USP9YP13-201ENST00000417797 480 ntBASIC-0.54□□□□□ -2.5
CPS1P31327 AC243964.1-201ENST00000441814 261 ntBASIC-0.54□□□□□ -2.5
CPS1P31327 AC022861.1-201ENST00000522981 663 ntBASIC-0.54□□□□□ -2.5
CPS1P31327 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.54□□□□□ -2.5
CPS1P31327 AC087685.1-201ENST00000587507 141 ntBASIC-0.54□□□□□ -2.5
CPS1P31327 RNA5SP128-201ENST00000365305 116 ntBASIC-0.55□□□□□ -2.5
CPS1P31327 RNU6-98P-201ENST00000384173 107 ntBASIC-0.55□□□□□ -2.5
CPS1P31327 RNU6-441P-201ENST00000384545 106 ntBASIC-0.55□□□□□ -2.5
CPS1P31327 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.55□□□□□ -2.5
CPS1P31327 VPS26BP1-201ENST00000417155 755 ntBASIC-0.55□□□□□ -2.5
CPS1P31327 AL512637.2-201ENST00000431287 1256 ntBASIC-0.55□□□□□ -2.5
CPS1P31327 AC005094.1-201ENST00000440420 368 ntBASIC-0.55□□□□□ -2.5
CPS1P31327 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC-0.55□□□□□ -2.5
CPS1P31327 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC-0.55□□□□□ -2.5
CPS1P31327 AC104417.1-201ENST00000523974 751 ntBASIC-0.55□□□□□ -2.5
CPS1P31327 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC-0.55□□□□□ -2.5
CPS1P31327 MTND5P32-201ENST00000560711 1802 ntBASIC-0.55□□□□□ -2.5
CPS1P31327 Y_RNA.363-201ENST00000365529 113 ntBASIC-0.56□□□□□ -2.5
CPS1P31327 RNU2-43P-201ENST00000410306 190 ntBASIC-0.56□□□□□ -2.5
CPS1P31327 TRAPPC13P1-201ENST00000435991 1062 ntBASIC-0.56□□□□□ -2.5
CPS1P31327 AL096829.2-201ENST00000446582 742 ntBASIC-0.56□□□□□ -2.5
CPS1P31327 AL441985.1-201ENST00000457727 251 ntBASIC-0.56□□□□□ -2.5
CPS1P31327 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.56□□□□□ -2.5
CPS1P31327 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC-0.56□□□□□ -2.5
CPS1P31327 RN7SKP258-201ENST00000517151 304 ntBASIC-0.56□□□□□ -2.5
CPS1P31327 RNA5SP291-201ENST00000517222 105 ntBASIC-0.56□□□□□ -2.5
CPS1P31327 IGKV1-22-201ENST00000524313 326 ntBASIC-0.56□□□□□ -2.5
CPS1P31327 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC-0.56□□□□□ -2.5
CPS1P31327 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC-0.57□□□□□ -2.5
CPS1P31327 ZNF849P-201ENST00000594711 1566 ntBASIC-0.57□□□□□ -2.5
CPS1P31327 AL109755.1-201ENST00000401791 649 ntBASIC-0.57□□□□□ -2.5
CPS1P31327 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC-0.57□□□□□ -2.5
CPS1P31327 BRK1P2-201ENST00000442875 223 ntBASIC-0.57□□□□□ -2.5
CPS1P31327 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC-0.57□□□□□ -2.5
CPS1P31327 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-0.57□□□□□ -2.5
CPS1P31327 AC112771.1-201ENST00000463581 102 ntBASIC-0.57□□□□□ -2.5
CPS1P31327 RPF2P2-201ENST00000504693 896 ntBASIC-0.57□□□□□ -2.5
CPS1P31327 AC113398.2-201ENST00000507630 558 ntBASIC-0.57□□□□□ -2.5
CPS1P31327 RNU6-488P-201ENST00000515918 99 ntBASIC-0.57□□□□□ -2.5
CPS1P31327 RN7SKP287-201ENST00000516546 266 ntBASIC-0.57□□□□□ -2.5
CPS1P31327 RNU5A-4P-201ENST00000516588 111 ntBASIC-0.57□□□□□ -2.5
CPS1P31327 MIR198-201ENST00000637333 62 ntBASIC-0.57□□□□□ -2.5
CPS1P31327 AC092268.1-201ENST00000342691 405 ntBASIC-0.58□□□□□ -2.5
CPS1P31327 RNA5SP275-201ENST00000363936 118 ntBASIC-0.58□□□□□ -2.5
CPS1P31327 RNU6-815P-201ENST00000384080 113 ntBASIC-0.58□□□□□ -2.5
CPS1P31327 MIR520A-201ENST00000384862 85 ntBASIC-0.58□□□□□ -2.5
CPS1P31327 MIR1303-201ENST00000408625 86 ntBASIC-0.58□□□□□ -2.5
CPS1P31327 RNA5SP222-201ENST00000411039 105 ntBASIC-0.58□□□□□ -2.5
CPS1P31327 AC244098.3-201ENST00000424803 96 ntBASIC-0.58□□□□□ -2.5
CPS1P31327 RPS26P48-201ENST00000491713 339 ntBASIC-0.58□□□□□ -2.5
CPS1P31327 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC-0.58□□□□□ -2.5
CPS1P31327 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC-0.58□□□□□ -2.5
CPS1P31327 AC104408.1-201ENST00000605241 170 ntBASIC-0.58□□□□□ -2.5
CPS1P31327 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.58□□□□□ -2.5
CPS1P31327 MIR520F-201ENST00000384824 87 ntBASIC-0.59□□□□□ -2.5
CPS1P31327 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC-0.59□□□□□ -2.5
CPS1P31327 AL355796.1-201ENST00000406706 323 ntBASIC-0.59□□□□□ -2.5
CPS1P31327 MTND4P19-201ENST00000446659 478 ntBASIC-0.59□□□□□ -2.5
CPS1P31327 MTCYBP1-201ENST00000454315 1119 ntBASIC-0.59□□□□□ -2.5
CPS1P31327 U7.7-201ENST00000459276 60 ntBASIC-0.59□□□□□ -2.5
CPS1P31327 AC004987.4-201ENST00000603383 338 ntBASIC-0.59□□□□□ -2.5
CPS1P31327 SNORA16.2-201ENST00000390991 127 ntBASIC-0.59□□□□□ -2.5
CPS1P31327 RN7SKP266-201ENST00000410232 287 ntBASIC-0.59□□□□□ -2.5
CPS1P31327 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.59□□□□□ -2.5
CPS1P31327 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.59□□□□□ -2.5
CPS1P31327 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.59□□□□□ -2.5
CPS1P31327 AC114811.1-201ENST00000507207 168 ntBASIC-0.59□□□□□ -2.5
CPS1P31327 AC116347.2-201ENST00000514912 523 ntBASIC-0.59□□□□□ -2.5
CPS1P31327 AC022523.2-201ENST00000561045 150 ntBASIC-0.59□□□□□ -2.5
CPS1P31327 HMGB1P33-201ENST00000563485 527 ntBASIC-0.59□□□□□ -2.5
CPS1P31327 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC-0.59□□□□□ -2.5
CPS1P31327 AC138749.5-201ENST00000611461 208 ntBASIC-0.59□□□□□ -2.5
CPS1P31327 AC011939.3-201ENST00000613686 466 ntBASIC-0.59□□□□□ -2.5
CPS1P31327 AC084824.4-201ENST00000620106 731 ntBASIC-0.59□□□□□ -2.5
CPS1P31327 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC-0.59□□□□□ -2.5
CPS1P31327 7SK.10-201ENST00000621414 298 ntBASIC-0.59□□□□□ -2.5
CPS1P31327 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.6□□□□□ -2.51
CPS1P31327 MIR643-201ENST00000385267 97 ntBASIC-0.6□□□□□ -2.51
CPS1P31327 MIR140-201ENST00000385282 100 ntBASIC-0.6□□□□□ -2.51
CPS1P31327 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.6□□□□□ -2.51
CPS1P31327 UBE2V1P10-201ENST00000414685 269 ntBASIC-0.6□□□□□ -2.51
CPS1P31327 AC138623.1-201ENST00000418060 216 ntBASIC-0.6□□□□□ -2.51
CPS1P31327 AC096531.1-201ENST00000419107 107 ntBASIC-0.6□□□□□ -2.51
CPS1P31327 MTND2P24-201ENST00000453434 806 ntBASIC-0.6□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms