Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.67□□□□□ -1.98
HOXC8P31273 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.67□□□□□ -1.98
HOXC8P31273 RPS12P2-201ENST00000439728 269 ntBASIC2.67□□□□□ -1.98
HOXC8P31273 AP001324.2-201ENST00000461163 319 ntBASIC2.67□□□□□ -1.98
HOXC8P31273 AC087884.1-201ENST00000469738 328 ntBASIC2.67□□□□□ -1.98
HOXC8P31273 AC022493.1-201ENST00000492984 337 ntBASIC2.67□□□□□ -1.98
HOXC8P31273 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.67□□□□□ -1.98
HOXC8P31273 SNORA19.2-201ENST00000516013 114 ntBASIC2.67□□□□□ -1.98
HOXC8P31273 IGKV3-31-201ENST00000523109 329 ntBASIC2.67□□□□□ -1.98
HOXC8P31273 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.67□□□□□ -1.98
HOXC8P31273 RPS3AP23-202ENST00000574601 686 ntBASIC2.67□□□□□ -1.98
HOXC8P31273 MIR1273D-201ENST00000577266 86 ntBASIC2.67□□□□□ -1.98
HOXC8P31273 AC069294.1-201ENST00000608397 350 ntBASIC2.67□□□□□ -1.98
HOXC8P31273 uc_338.5-201ENST00000611839 155 ntBASIC2.67□□□□□ -1.98
HOXC8P31273 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.67□□□□□ -1.98
HOXC8P31273 TPTEP1-208ENST00000636884 213 ntBASIC2.67□□□□□ -1.98
HOXC8P31273 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.67□□□□□ -1.98
HOXC8P31273 AL109809.4-201ENST00000603520 2185 ntBASIC2.67□□□□□ -1.98
HOXC8P31273 AC069528.2-201ENST00000624849 1991 ntBASIC2.67□□□□□ -1.98
HOXC8P31273 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HOXC8P31273 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HOXC8P31273 MT-TD-201ENST00000387419 68 ntBASIC2.66□□□□□ -1.98
HOXC8P31273 EIF4E2P1-201ENST00000393781 255 ntBASIC2.66□□□□□ -1.98
HOXC8P31273 SNORD88.1-201ENST00000408684 91 ntBASIC2.66□□□□□ -1.98
HOXC8P31273 Y_RNA.623-201ENST00000411128 95 ntBASIC2.66□□□□□ -1.98
HOXC8P31273 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.66□□□□□ -1.98
HOXC8P31273 AL627311.1-201ENST00000431514 115 ntBASIC2.66□□□□□ -1.98
HOXC8P31273 MICF-203ENST00000432679 129 ntBASIC2.66□□□□□ -1.98
HOXC8P31273 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.66□□□□□ -1.98
HOXC8P31273 snoU13.26-201ENST00000459452 105 ntBASIC2.66□□□□□ -1.98
HOXC8P31273 AC117503.1-201ENST00000472241 394 ntBASIC2.66□□□□□ -1.98
HOXC8P31273 RPL36AP48-201ENST00000485521 314 ntBASIC2.66□□□□□ -1.98
HOXC8P31273 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.66□□□□□ -1.98
HOXC8P31273 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.66□□□□□ -1.98
HOXC8P31273 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HOXC8P31273 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.66□□□□□ -1.98
HOXC8P31273 AC105029.1-201ENST00000520250 669 ntBASIC2.66□□□□□ -1.98
HOXC8P31273 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.66□□□□□ -1.98
HOXC8P31273 MTCO3P23-201ENST00000561363 289 ntBASIC2.66□□□□□ -1.98
HOXC8P31273 MIR4648-201ENST00000580107 72 ntBASIC2.66□□□□□ -1.98
HOXC8P31273 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.66□□□□□ -1.98
HOXC8P31273 AC002044.1-201ENST00000606707 158 ntBASIC2.66□□□□□ -1.98
HOXC8P31273 AC022140.2-201ENST00000623500 188 ntBASIC2.66□□□□□ -1.98
HOXC8P31273 AL359697.1-201ENST00000624879 587 ntBASIC2.66□□□□□ -1.98
HOXC8P31273 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.66□□□□□ -1.98
HOXC8P31273 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HOXC8P31273 MTND5P6-201ENST00000422338 1798 ntBASIC2.66□□□□□ -1.98
HOXC8P31273 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.66□□□□□ -1.98
HOXC8P31273 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.66□□□□□ -1.98
HOXC8P31273 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.66□□□□□ -1.98
HOXC8P31273 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.66□□□□□ -1.98
HOXC8P31273 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
HOXC8P31273 SNORD3E-201ENST00000362899 217 ntBASIC2.65□□□□□ -1.99
HOXC8P31273 RNU4-73P-201ENST00000363164 141 ntBASIC2.65□□□□□ -1.99
HOXC8P31273 RNU6-254P-201ENST00000363377 107 ntBASIC2.65□□□□□ -1.99
HOXC8P31273 SNORD113-7-201ENST00000363762 77 ntBASIC2.65□□□□□ -1.99
HOXC8P31273 RNU6-1328P-201ENST00000410938 106 ntBASIC2.65□□□□□ -1.99
HOXC8P31273 AL096701.2-201ENST00000416920 238 ntBASIC2.65□□□□□ -1.99
HOXC8P31273 NDUFA5P4-201ENST00000436704 385 ntBASIC2.65□□□□□ -1.99
HOXC8P31273 MTND4LP16-201ENST00000440828 295 ntBASIC2.65□□□□□ -1.99
HOXC8P31273 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.65□□□□□ -1.99
HOXC8P31273 RPL7P43-201ENST00000478876 753 ntBASIC2.65□□□□□ -1.99
HOXC8P31273 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.65□□□□□ -1.99
HOXC8P31273 AC026436.1-201ENST00000510537 270 ntBASIC2.65□□□□□ -1.99
HOXC8P31273 SNORA14.1-201ENST00000516113 141 ntBASIC2.65□□□□□ -1.99
HOXC8P31273 RNU6-864P-201ENST00000516256 108 ntBASIC2.65□□□□□ -1.99
HOXC8P31273 Y_RNA.675-201ENST00000516389 149 ntBASIC2.65□□□□□ -1.99
HOXC8P31273 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.65□□□□□ -1.99
HOXC8P31273 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.65□□□□□ -1.99
HOXC8P31273 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.65□□□□□ -1.99
HOXC8P31273 AL670379.10-201ENST00000604330 253 ntBASIC2.65□□□□□ -1.99
HOXC8P31273 AL670379.9-201ENST00000605428 253 ntBASIC2.65□□□□□ -1.99
HOXC8P31273 AL132765.2-201ENST00000610812 351 ntBASIC2.65□□□□□ -1.99
HOXC8P31273 AL359757.2-201ENST00000624309 274 ntBASIC2.65□□□□□ -1.99
HOXC8P31273 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.65□□□□□ -1.99
HOXC8P31273 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
HOXC8P31273 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.65□□□□□ -1.99
HOXC8P31273 RNU6-694P-201ENST00000364071 147 ntBASIC2.64□□□□□ -1.99
HOXC8P31273 RNU6-266P-201ENST00000364225 107 ntBASIC2.64□□□□□ -1.99
HOXC8P31273 Y_RNA.301-201ENST00000364990 103 ntBASIC2.64□□□□□ -1.99
HOXC8P31273 AL079342.1-201ENST00000401460 267 ntBASIC2.64□□□□□ -1.99
HOXC8P31273 AC007064.1-201ENST00000412238 351 ntBASIC2.64□□□□□ -1.99
HOXC8P31273 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.64□□□□□ -1.99
HOXC8P31273 HMGB1P18-201ENST00000438801 619 ntBASIC2.64□□□□□ -1.99
HOXC8P31273 AMD1P1-201ENST00000457220 922 ntBASIC2.64□□□□□ -1.99
HOXC8P31273 AC006026.2-201ENST00000457376 180 ntBASIC2.64□□□□□ -1.99
HOXC8P31273 RNU7-26P-201ENST00000458980 63 ntBASIC2.64□□□□□ -1.99
HOXC8P31273 AC133134.1-201ENST00000466800 359 ntBASIC2.64□□□□□ -1.99
HOXC8P31273 MTND4P17-201ENST00000470444 350 ntBASIC2.64□□□□□ -1.99
HOXC8P31273 UBL5P3-201ENST00000475112 231 ntBASIC2.64□□□□□ -1.99
HOXC8P31273 RPS27AP9-201ENST00000477681 438 ntBASIC2.64□□□□□ -1.99
HOXC8P31273 HMGB1P30-201ENST00000492455 606 ntBASIC2.64□□□□□ -1.99
HOXC8P31273 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.64□□□□□ -1.99
HOXC8P31273 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.64□□□□□ -1.99
HOXC8P31273 AC008716.1-201ENST00000511084 513 ntBASIC2.64□□□□□ -1.99
HOXC8P31273 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.64□□□□□ -1.99
HOXC8P31273 RNU6-1088P-201ENST00000516850 104 ntBASIC2.64□□□□□ -1.99
HOXC8P31273 RNU6-323P-201ENST00000521915 107 ntBASIC2.64□□□□□ -1.99
HOXC8P31273 AC021269.2-201ENST00000532318 330 ntBASIC2.64□□□□□ -1.99
HOXC8P31273 AP000889.2-201ENST00000532684 490 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms