Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 CR383656.8-201ENST00000549046 145 ntBASIC2.69□□□□□ -1.98
HOXA13P31271 AC090115.3-201ENST00000553218 849 ntBASIC2.69□□□□□ -1.98
HOXA13P31271 AC026464.5-201ENST00000562497 722 ntBASIC2.69□□□□□ -1.98
HOXA13P31271 AC090616.3-201ENST00000582184 217 ntBASIC2.69□□□□□ -1.98
HOXA13P31271 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.69□□□□□ -1.98
HOXA13P31271 C8orf59P2-201ENST00000603441 271 ntBASIC2.69□□□□□ -1.98
HOXA13P31271 APOOP1-201ENST00000604695 592 ntBASIC2.69□□□□□ -1.98
HOXA13P31271 AC096772.1-201ENST00000609146 564 ntBASIC2.69□□□□□ -1.98
HOXA13P31271 AL121757.2-201ENST00000611223 313 ntBASIC2.69□□□□□ -1.98
HOXA13P31271 AC063943.3-201ENST00000615562 356 ntBASIC2.69□□□□□ -1.98
HOXA13P31271 AC097372.5-201ENST00000623665 376 ntBASIC2.69□□□□□ -1.98
HOXA13P31271 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
HOXA13P31271 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.69□□□□□ -1.98
HOXA13P31271 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HOXA13P31271 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.68□□□□□ -1.98
HOXA13P31271 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
HOXA13P31271 MIR21-201ENST00000362134 72 ntBASIC2.68□□□□□ -1.98
HOXA13P31271 SNORD114-19-201ENST00000363072 75 ntBASIC2.68□□□□□ -1.98
HOXA13P31271 RNU6-1009P-201ENST00000390996 107 ntBASIC2.68□□□□□ -1.98
HOXA13P31271 RNU6-1140P-201ENST00000410517 106 ntBASIC2.68□□□□□ -1.98
HOXA13P31271 AC097463.2-201ENST00000421074 142 ntBASIC2.68□□□□□ -1.98
HOXA13P31271 MTND3P23-201ENST00000431980 347 ntBASIC2.68□□□□□ -1.98
HOXA13P31271 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.68□□□□□ -1.98
HOXA13P31271 RPL7P12-201ENST00000446719 750 ntBASIC2.68□□□□□ -1.98
HOXA13P31271 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HOXA13P31271 Y_RNA.654-201ENST00000497848 106 ntBASIC2.68□□□□□ -1.98
HOXA13P31271 RNU1-41P-201ENST00000516161 162 ntBASIC2.68□□□□□ -1.98
HOXA13P31271 RNU1-48P-201ENST00000516400 162 ntBASIC2.68□□□□□ -1.98
HOXA13P31271 RNU7-30P-201ENST00000516835 62 ntBASIC2.68□□□□□ -1.98
HOXA13P31271 RNU6-323P-201ENST00000521915 107 ntBASIC2.68□□□□□ -1.98
HOXA13P31271 CYCSP27-201ENST00000527643 293 ntBASIC2.68□□□□□ -1.98
HOXA13P31271 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.68□□□□□ -1.98
HOXA13P31271 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.68□□□□□ -1.98
HOXA13P31271 PSMA3P-201ENST00000555485 635 ntBASIC2.68□□□□□ -1.98
HOXA13P31271 MTCO3P23-201ENST00000561363 289 ntBASIC2.68□□□□□ -1.98
HOXA13P31271 AC105137.2-201ENST00000569073 466 ntBASIC2.68□□□□□ -1.98
HOXA13P31271 AC067747.1-201ENST00000608026 250 ntBASIC2.68□□□□□ -1.98
HOXA13P31271 FAM157A-202ENST00000615155 405 ntBASIC2.68□□□□□ -1.98
HOXA13P31271 RMST_7.1-201ENST00000621935 268 ntBASIC2.68□□□□□ -1.98
HOXA13P31271 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.68□□□□□ -1.98
HOXA13P31271 ZNF658B-202ENST00000615961 3375 ntBASIC2.67□□□□□ -1.98
HOXA13P31271 AC010329.5-201ENST00000623497 2174 ntBASIC2.67□□□□□ -1.98
HOXA13P31271 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
HOXA13P31271 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HOXA13P31271 MTND4P27-201ENST00000450813 1354 ntBASIC2.67□□□□□ -1.98
HOXA13P31271 RNU6-486P-201ENST00000363116 107 ntBASIC2.67□□□□□ -1.98
HOXA13P31271 RNU6-82P-201ENST00000363970 107 ntBASIC2.67□□□□□ -1.98
HOXA13P31271 RNU6-694P-201ENST00000364071 147 ntBASIC2.67□□□□□ -1.98
HOXA13P31271 RNU6-843P-201ENST00000384454 104 ntBASIC2.67□□□□□ -1.98
HOXA13P31271 RNU6-1245P-201ENST00000411130 106 ntBASIC2.67□□□□□ -1.98
HOXA13P31271 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.67□□□□□ -1.98
HOXA13P31271 AL096701.2-201ENST00000416920 238 ntBASIC2.67□□□□□ -1.98
HOXA13P31271 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.67□□□□□ -1.98
HOXA13P31271 BX276092.3-201ENST00000424182 230 ntBASIC2.67□□□□□ -1.98
HOXA13P31271 MTCO3P46-201ENST00000425787 232 ntBASIC2.67□□□□□ -1.98
HOXA13P31271 AC092427.1-202ENST00000430569 476 ntBASIC2.67□□□□□ -1.98
HOXA13P31271 AC007547.1-201ENST00000462177 490 ntBASIC2.67□□□□□ -1.98
HOXA13P31271 RPS27AP9-201ENST00000477681 438 ntBASIC2.67□□□□□ -1.98
HOXA13P31271 SNORA19.2-201ENST00000516013 114 ntBASIC2.67□□□□□ -1.98
HOXA13P31271 SNORA14.1-201ENST00000516113 141 ntBASIC2.67□□□□□ -1.98
HOXA13P31271 RPPH1-2P-201ENST00000516688 293 ntBASIC2.67□□□□□ -1.98
HOXA13P31271 RNU6-1088P-201ENST00000516850 104 ntBASIC2.67□□□□□ -1.98
HOXA13P31271 AP002770.2-201ENST00000543613 532 ntBASIC2.67□□□□□ -1.98
HOXA13P31271 RPS3AP23-202ENST00000574601 686 ntBASIC2.67□□□□□ -1.98
HOXA13P31271 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.67□□□□□ -1.98
HOXA13P31271 FGF7P1-201ENST00000582820 288 ntBASIC2.67□□□□□ -1.98
HOXA13P31271 RPS15AP11-201ENST00000594193 385 ntBASIC2.67□□□□□ -1.98
HOXA13P31271 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.67□□□□□ -1.98
HOXA13P31271 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HOXA13P31271 AC138627.2-201ENST00000624202 601 ntBASIC2.67□□□□□ -1.98
HOXA13P31271 AL359697.1-201ENST00000624879 587 ntBASIC2.67□□□□□ -1.98
HOXA13P31271 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.67□□□□□ -1.98
HOXA13P31271 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.67□□□□□ -1.98
HOXA13P31271 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HOXA13P31271 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.67□□□□□ -1.98
HOXA13P31271 MTND5P6-201ENST00000422338 1798 ntBASIC2.66□□□□□ -1.98
HOXA13P31271 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
HOXA13P31271 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.66□□□□□ -1.98
HOXA13P31271 RNU6-797P-201ENST00000363101 109 ntBASIC2.66□□□□□ -1.98
HOXA13P31271 Y_RNA.142-201ENST00000363491 102 ntBASIC2.66□□□□□ -1.98
HOXA13P31271 Y_RNA.356-201ENST00000365475 113 ntBASIC2.66□□□□□ -1.98
HOXA13P31271 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.66□□□□□ -1.98
HOXA13P31271 RNU1-109P-201ENST00000383960 147 ntBASIC2.66□□□□□ -1.98
HOXA13P31271 RNU6-1106P-201ENST00000390845 107 ntBASIC2.66□□□□□ -1.98
HOXA13P31271 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.66□□□□□ -1.98
HOXA13P31271 SNORD56-201ENST00000413522 71 ntBASIC2.66□□□□□ -1.98
HOXA13P31271 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.66□□□□□ -1.98
HOXA13P31271 AC074117.2-201ENST00000417130 397 ntBASIC2.66□□□□□ -1.98
HOXA13P31271 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.66□□□□□ -1.98
HOXA13P31271 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.66□□□□□ -1.98
HOXA13P31271 RPS15AP28-201ENST00000435088 386 ntBASIC2.66□□□□□ -1.98
HOXA13P31271 IFNA20P-201ENST00000436840 528 ntBASIC2.66□□□□□ -1.98
HOXA13P31271 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.66□□□□□ -1.98
HOXA13P31271 AL445687.1-201ENST00000439946 251 ntBASIC2.66□□□□□ -1.98
HOXA13P31271 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.66□□□□□ -1.98
HOXA13P31271 RNU6-329P-201ENST00000459618 107 ntBASIC2.66□□□□□ -1.98
HOXA13P31271 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.66□□□□□ -1.98
HOXA13P31271 AK3P2-201ENST00000507976 429 ntBASIC2.66□□□□□ -1.98
HOXA13P31271 SMURF2P1-201ENST00000514992 481 ntBASIC2.66□□□□□ -1.98
HOXA13P31271 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms