Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CNGA1P29973 Y_RNA.646-201ENST00000410980 101 ntBASIC3.56□□□□□ -1.84
CNGA1P29973 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.56□□□□□ -1.84
CNGA1P29973 CYCSP48-201ENST00000417124 323 ntBASIC3.56□□□□□ -1.84
CNGA1P29973 USMG5P1-201ENST00000425964 177 ntBASIC3.56□□□□□ -1.84
CNGA1P29973 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.56□□□□□ -1.84
CNGA1P29973 CST9LP2-201ENST00000437612 320 ntBASIC3.56□□□□□ -1.84
CNGA1P29973 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CNGA1P29973 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.56□□□□□ -1.84
CNGA1P29973 RNA5SP356-201ENST00000515972 94 ntBASIC3.56□□□□□ -1.84
CNGA1P29973 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.56□□□□□ -1.84
CNGA1P29973 AC109329.1-201ENST00000518744 317 ntBASIC3.56□□□□□ -1.84
CNGA1P29973 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.56□□□□□ -1.84
CNGA1P29973 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.56□□□□□ -1.84
CNGA1P29973 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.56□□□□□ -1.84
CNGA1P29973 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.56□□□□□ -1.84
CNGA1P29973 AC010620.2-201ENST00000600135 313 ntBASIC3.56□□□□□ -1.84
CNGA1P29973 AC084781.2-201ENST00000615568 161 ntBASIC3.56□□□□□ -1.84
CNGA1P29973 AC007792.1-201ENST00000623023 402 ntBASIC3.56□□□□□ -1.84
CNGA1P29973 AC090574.1-201ENST00000623186 233 ntBASIC3.56□□□□□ -1.84
CNGA1P29973 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.56□□□□□ -1.84
CNGA1P29973 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.56□□□□□ -1.84
CNGA1P29973 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CNGA1P29973 AC009541.1-201ENST00000438279 2662 ntBASIC3.56□□□□□ -1.84
CNGA1P29973 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.55□□□□□ -1.84
CNGA1P29973 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CNGA1P29973 MIR148B-201ENST00000362252 99 ntBASIC3.55□□□□□ -1.84
CNGA1P29973 RNA5SP383-201ENST00000362934 120 ntBASIC3.55□□□□□ -1.84
CNGA1P29973 SNORD50.1-201ENST00000362987 71 ntBASIC3.55□□□□□ -1.84
CNGA1P29973 RNU6-1285P-201ENST00000363480 105 ntBASIC3.55□□□□□ -1.84
CNGA1P29973 SNORA68.1-201ENST00000364537 132 ntBASIC3.55□□□□□ -1.84
CNGA1P29973 Y_RNA.813-201ENST00000364639 102 ntBASIC3.55□□□□□ -1.84
CNGA1P29973 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.55□□□□□ -1.84
CNGA1P29973 SAR1AP4-201ENST00000429225 591 ntBASIC3.55□□□□□ -1.84
CNGA1P29973 RPL23AP58-201ENST00000440453 469 ntBASIC3.55□□□□□ -1.84
CNGA1P29973 MTCO3P10-201ENST00000455912 772 ntBASIC3.55□□□□□ -1.84
CNGA1P29973 HMGN1P13-201ENST00000505795 138 ntBASIC3.55□□□□□ -1.84
CNGA1P29973 AC097473.1-201ENST00000508142 408 ntBASIC3.55□□□□□ -1.84
CNGA1P29973 AC091874.1-201ENST00000511402 339 ntBASIC3.55□□□□□ -1.84
CNGA1P29973 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.55□□□□□ -1.84
CNGA1P29973 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.55□□□□□ -1.84
CNGA1P29973 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.55□□□□□ -1.84
CNGA1P29973 AC105137.2-201ENST00000569073 466 ntBASIC3.55□□□□□ -1.84
CNGA1P29973 RPL23AP78-201ENST00000599928 470 ntBASIC3.55□□□□□ -1.84
CNGA1P29973 uc_338.25-201ENST00000613756 156 ntBASIC3.55□□□□□ -1.84
CNGA1P29973 AL160413.1-201ENST00000622780 310 ntBASIC3.55□□□□□ -1.84
CNGA1P29973 MTND5P30-201ENST00000452896 1731 ntBASIC3.54□□□□□ -1.84
CNGA1P29973 Y_RNA.2-201ENST00000362330 96 ntBASIC3.54□□□□□ -1.84
CNGA1P29973 Y_RNA.123-201ENST00000363338 102 ntBASIC3.54□□□□□ -1.84
CNGA1P29973 Y_RNA.315-201ENST00000365117 102 ntBASIC3.54□□□□□ -1.84
CNGA1P29973 RN7SKP61-201ENST00000410642 295 ntBASIC3.54□□□□□ -1.84
CNGA1P29973 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.54□□□□□ -1.84
CNGA1P29973 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.54□□□□□ -1.84
CNGA1P29973 AC138623.1-201ENST00000418060 216 ntBASIC3.54□□□□□ -1.84
CNGA1P29973 Z98742.2-201ENST00000431564 187 ntBASIC3.54□□□□□ -1.84
CNGA1P29973 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.54□□□□□ -1.84
CNGA1P29973 AC009296.1-201ENST00000443146 155 ntBASIC3.54□□□□□ -1.84
CNGA1P29973 AC079354.2-201ENST00000453523 154 ntBASIC3.54□□□□□ -1.84
CNGA1P29973 snoU13.14-201ENST00000459372 104 ntBASIC3.54□□□□□ -1.84
CNGA1P29973 AC112771.1-201ENST00000463581 102 ntBASIC3.54□□□□□ -1.84
CNGA1P29973 RPS26P21-201ENST00000475397 348 ntBASIC3.54□□□□□ -1.84
CNGA1P29973 RPL36AP48-201ENST00000485521 314 ntBASIC3.54□□□□□ -1.84
CNGA1P29973 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.54□□□□□ -1.84
CNGA1P29973 RNA5SP384-201ENST00000516615 116 ntBASIC3.54□□□□□ -1.84
CNGA1P29973 AC009318.2-201ENST00000610917 651 ntBASIC3.54□□□□□ -1.84
CNGA1P29973 SNORA43.4-201ENST00000629559 138 ntBASIC3.54□□□□□ -1.84
CNGA1P29973 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.54□□□□□ -1.84
CNGA1P29973 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.54□□□□□ -1.84
CNGA1P29973 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CNGA1P29973 DYNLT3P1-201ENST00000378574 347 ntBASIC3.53□□□□□ -1.84
CNGA1P29973 SNORD21-201ENST00000383953 95 ntBASIC3.53□□□□□ -1.84
CNGA1P29973 Y_RNA.419-201ENST00000384041 102 ntBASIC3.53□□□□□ -1.84
CNGA1P29973 SNORA75.6-201ENST00000391318 127 ntBASIC3.53□□□□□ -1.84
CNGA1P29973 RN7SKP220-201ENST00000410611 288 ntBASIC3.53□□□□□ -1.84
CNGA1P29973 RNU6-1328P-201ENST00000410938 106 ntBASIC3.53□□□□□ -1.84
CNGA1P29973 TRIAP1P1-201ENST00000427062 225 ntBASIC3.53□□□□□ -1.84
CNGA1P29973 RPL30P15-201ENST00000457129 321 ntBASIC3.53□□□□□ -1.84
CNGA1P29973 FO393415.2-201ENST00000480085 343 ntBASIC3.53□□□□□ -1.84
CNGA1P29973 RN7SL283P-201ENST00000489055 303 ntBASIC3.53□□□□□ -1.84
CNGA1P29973 AC005741.1-201ENST00000511094 432 ntBASIC3.53□□□□□ -1.84
CNGA1P29973 AC091826.1-201ENST00000514065 313 ntBASIC3.53□□□□□ -1.84
CNGA1P29973 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.53□□□□□ -1.84
CNGA1P29973 MIR5696-201ENST00000578474 85 ntBASIC3.53□□□□□ -1.84
CNGA1P29973 MIR4765-201ENST00000585007 77 ntBASIC3.53□□□□□ -1.84
CNGA1P29973 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.53□□□□□ -1.84
CNGA1P29973 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.53□□□□□ -1.84
CNGA1P29973 AC013412.1-201ENST00000610687 192 ntBASIC3.53□□□□□ -1.84
CNGA1P29973 AC133104.2-201ENST00000615272 193 ntBASIC3.53□□□□□ -1.84
CNGA1P29973 AC022140.2-201ENST00000623500 188 ntBASIC3.53□□□□□ -1.84
CNGA1P29973 AC073476.4-201ENST00000628409 72 ntBASIC3.53□□□□□ -1.84
CNGA1P29973 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CNGA1P29973 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.52□□□□□ -1.85
CNGA1P29973 Y_RNA.40-201ENST00000362645 93 ntBASIC3.52□□□□□ -1.85
CNGA1P29973 RNU6-694P-201ENST00000364071 147 ntBASIC3.52□□□□□ -1.85
CNGA1P29973 RNU4-76P-201ENST00000364509 141 ntBASIC3.52□□□□□ -1.85
CNGA1P29973 EIF1AXP1-201ENST00000419267 435 ntBASIC3.52□□□□□ -1.85
CNGA1P29973 BX276092.3-201ENST00000424182 230 ntBASIC3.52□□□□□ -1.85
CNGA1P29973 MICF-203ENST00000432679 129 ntBASIC3.52□□□□□ -1.85
CNGA1P29973 HMGN1P18-201ENST00000457642 277 ntBASIC3.52□□□□□ -1.85
CNGA1P29973 AC006483.1-201ENST00000487308 313 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 186.6 ms