Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 BNIP3P16-201ENST00000589779 534 ntBASIC2.02□□□□□ -2.09
HLA-DPA1P20036 CYP2C61P-201ENST00000604072 290 ntBASIC2.02□□□□□ -2.09
HLA-DPA1P20036 AP000654.2-201ENST00000605633 586 ntBASIC2.02□□□□□ -2.09
HLA-DPA1P20036 AC008536.2-201ENST00000607284 349 ntBASIC2.02□□□□□ -2.09
HLA-DPA1P20036 Y_RNA.783-201ENST00000613546 102 ntBASIC2.02□□□□□ -2.09
HLA-DPA1P20036 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
HLA-DPA1P20036 AC099842.1-201ENST00000619919 596 ntBASIC2.02□□□□□ -2.09
HLA-DPA1P20036 U1.36-201ENST00000620684 176 ntBASIC2.02□□□□□ -2.09
HLA-DPA1P20036 AP000770.2-201ENST00000623694 100 ntBASIC2.02□□□□□ -2.09
HLA-DPA1P20036 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.02□□□□□ -2.09
HLA-DPA1P20036 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.02□□□□□ -2.09
HLA-DPA1P20036 SNORD98-201ENST00000636377 67 ntBASIC2.02□□□□□ -2.09
HLA-DPA1P20036 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
HLA-DPA1P20036 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
HLA-DPA1P20036 MTND4P1-201ENST00000457501 1466 ntBASIC2.01□□□□□ -2.09
HLA-DPA1P20036 RNU4-15P-201ENST00000362613 141 ntBASIC2.01□□□□□ -2.09
HLA-DPA1P20036 Y_RNA.99-201ENST00000363138 105 ntBASIC2.01□□□□□ -2.09
HLA-DPA1P20036 RNU6-43P-201ENST00000384302 107 ntBASIC2.01□□□□□ -2.09
HLA-DPA1P20036 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
HLA-DPA1P20036 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
HLA-DPA1P20036 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.01□□□□□ -2.09
HLA-DPA1P20036 RNU2-29P-201ENST00000410423 189 ntBASIC2.01□□□□□ -2.09
HLA-DPA1P20036 RN7SKP142-201ENST00000411236 328 ntBASIC2.01□□□□□ -2.09
HLA-DPA1P20036 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.01□□□□□ -2.09
HLA-DPA1P20036 MTND1P23-201ENST00000416931 372 ntBASIC2.01□□□□□ -2.09
HLA-DPA1P20036 AL358934.1-201ENST00000432346 324 ntBASIC2.01□□□□□ -2.09
HLA-DPA1P20036 AL121890.1-201ENST00000435457 205 ntBASIC2.01□□□□□ -2.09
HLA-DPA1P20036 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.01□□□□□ -2.09
HLA-DPA1P20036 AC132479.1-201ENST00000449160 144 ntBASIC2.01□□□□□ -2.09
HLA-DPA1P20036 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.01□□□□□ -2.09
HLA-DPA1P20036 AC145146.1-201ENST00000496370 254 ntBASIC2.01□□□□□ -2.09
HLA-DPA1P20036 YWHAEP4-201ENST00000505390 198 ntBASIC2.01□□□□□ -2.09
HLA-DPA1P20036 AC008752.3-201ENST00000588113 712 ntBASIC2.01□□□□□ -2.09
HLA-DPA1P20036 RSL24D1P11-201ENST00000591045 491 ntBASIC2.01□□□□□ -2.09
HLA-DPA1P20036 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.01□□□□□ -2.09
HLA-DPA1P20036 AC025449.1-201ENST00000603896 529 ntBASIC2.01□□□□□ -2.09
HLA-DPA1P20036 AC002044.1-201ENST00000606707 158 ntBASIC2.01□□□□□ -2.09
HLA-DPA1P20036 AC109347.2-201ENST00000610220 349 ntBASIC2.01□□□□□ -2.09
HLA-DPA1P20036 AC098657.3-201ENST00000620434 263 ntBASIC2.01□□□□□ -2.09
HLA-DPA1P20036 AC241585.2-209ENST00000638217 143 ntBASIC2.01□□□□□ -2.09
HLA-DPA1P20036 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
HLA-DPA1P20036 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2□□□□□ -2.09
HLA-DPA1P20036 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
HLA-DPA1P20036 RNU6-1141P-201ENST00000364520 107 ntBASIC2□□□□□ -2.09
HLA-DPA1P20036 RNA5SP501-201ENST00000410990 112 ntBASIC2□□□□□ -2.09
HLA-DPA1P20036 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2□□□□□ -2.09
HLA-DPA1P20036 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2□□□□□ -2.09
HLA-DPA1P20036 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2□□□□□ -2.09
HLA-DPA1P20036 UBE2V1P4-201ENST00000425374 344 ntBASIC2□□□□□ -2.09
HLA-DPA1P20036 AC010975.2-201ENST00000427781 588 ntBASIC2□□□□□ -2.09
HLA-DPA1P20036 MTCO2P11-201ENST00000431069 680 ntBASIC2□□□□□ -2.09
HLA-DPA1P20036 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2□□□□□ -2.09
HLA-DPA1P20036 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2□□□□□ -2.09
HLA-DPA1P20036 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2□□□□□ -2.09
HLA-DPA1P20036 AL031667.1-201ENST00000440222 725 ntBASIC2□□□□□ -2.09
HLA-DPA1P20036 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2□□□□□ -2.09
HLA-DPA1P20036 AL031274.1-201ENST00000450334 232 ntBASIC2□□□□□ -2.09
HLA-DPA1P20036 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
HLA-DPA1P20036 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2□□□□□ -2.09
HLA-DPA1P20036 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2□□□□□ -2.09
HLA-DPA1P20036 AC105417.1-201ENST00000514691 285 ntBASIC2□□□□□ -2.09
HLA-DPA1P20036 RNU6-430P-201ENST00000517078 107 ntBASIC2□□□□□ -2.09
HLA-DPA1P20036 SNORA25.17-201ENST00000517184 124 ntBASIC2□□□□□ -2.09
HLA-DPA1P20036 AP005435.4-201ENST00000529514 284 ntBASIC2□□□□□ -2.09
HLA-DPA1P20036 AL356057.1-201ENST00000533798 831 ntBASIC2□□□□□ -2.09
HLA-DPA1P20036 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2□□□□□ -2.09
HLA-DPA1P20036 AL391840.1-201ENST00000571144 367 ntBASIC2□□□□□ -2.09
HLA-DPA1P20036 MIR3136-201ENST00000583498 78 ntBASIC2□□□□□ -2.09
HLA-DPA1P20036 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2□□□□□ -2.09
HLA-DPA1P20036 AC073114.1-201ENST00000612027 490 ntBASIC2□□□□□ -2.09
HLA-DPA1P20036 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2□□□□□ -2.09
HLA-DPA1P20036 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2□□□□□ -2.09
HLA-DPA1P20036 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
HLA-DPA1P20036 MTND4P14-201ENST00000435799 1354 ntBASIC1.99□□□□□ -2.09
HLA-DPA1P20036 SNORD114-1-201ENST00000362705 72 ntBASIC1.99□□□□□ -2.09
HLA-DPA1P20036 RNU6-142P-201ENST00000384019 107 ntBASIC1.99□□□□□ -2.09
HLA-DPA1P20036 SNORA12-201ENST00000391162 147 ntBASIC1.99□□□□□ -2.09
HLA-DPA1P20036 AL079342.1-201ENST00000401460 267 ntBASIC1.99□□□□□ -2.09
HLA-DPA1P20036 RNU2-2P-201ENST00000410396 191 ntBASIC1.99□□□□□ -2.09
HLA-DPA1P20036 EIF4EP2-201ENST00000422816 654 ntBASIC1.99□□□□□ -2.09
HLA-DPA1P20036 HMGN2P38-201ENST00000423806 265 ntBASIC1.99□□□□□ -2.09
HLA-DPA1P20036 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.99□□□□□ -2.09
HLA-DPA1P20036 AC244670.1-201ENST00000436879 112 ntBASIC1.99□□□□□ -2.09
HLA-DPA1P20036 AC010095.1-201ENST00000443543 144 ntBASIC1.99□□□□□ -2.09
HLA-DPA1P20036 RPS27AP8-201ENST00000452665 445 ntBASIC1.99□□□□□ -2.09
HLA-DPA1P20036 AC013470.1-201ENST00000453438 462 ntBASIC1.99□□□□□ -2.09
HLA-DPA1P20036 SNRPFP3-201ENST00000457792 225 ntBASIC1.99□□□□□ -2.09
HLA-DPA1P20036 snoU13.26-201ENST00000459452 105 ntBASIC1.99□□□□□ -2.09
HLA-DPA1P20036 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.99□□□□□ -2.09
HLA-DPA1P20036 RPL38P4-201ENST00000502376 214 ntBASIC1.99□□□□□ -2.09
HLA-DPA1P20036 MIR449C-201ENST00000516047 92 ntBASIC1.99□□□□□ -2.09
HLA-DPA1P20036 AP000873.5-201ENST00000533906 236 ntBASIC1.99□□□□□ -2.09
HLA-DPA1P20036 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.99□□□□□ -2.09
HLA-DPA1P20036 MIR5089-201ENST00000580047 84 ntBASIC1.99□□□□□ -2.09
HLA-DPA1P20036 U2.15-201ENST00000611544 191 ntBASIC1.99□□□□□ -2.09
HLA-DPA1P20036 U2.16-201ENST00000613119 191 ntBASIC1.99□□□□□ -2.09
HLA-DPA1P20036 U2.12-201ENST00000613778 191 ntBASIC1.99□□□□□ -2.09
HLA-DPA1P20036 U2.20-201ENST00000613956 192 ntBASIC1.99□□□□□ -2.09
HLA-DPA1P20036 U2.9-201ENST00000615427 191 ntBASIC1.99□□□□□ -2.09
HLA-DPA1P20036 U2.11-201ENST00000616345 191 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms