Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 SNORA25B-201ENST00000365507 128 ntBASIC2.3□□□□□ -2.04
PDGFRAP16234 MTCO3P41-201ENST00000414801 328 ntBASIC2.3□□□□□ -2.04
PDGFRAP16234 AL356320.1-201ENST00000429616 163 ntBASIC2.3□□□□□ -2.04
PDGFRAP16234 AL139415.2-201ENST00000431968 163 ntBASIC2.3□□□□□ -2.04
PDGFRAP16234 AL121601.2-201ENST00000438019 707 ntBASIC2.3□□□□□ -2.04
PDGFRAP16234 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.3□□□□□ -2.04
PDGFRAP16234 GPM6BP3-201ENST00000442797 145 ntBASIC2.3□□□□□ -2.04
PDGFRAP16234 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.3□□□□□ -2.04
PDGFRAP16234 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.3□□□□□ -2.04
PDGFRAP16234 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.3□□□□□ -2.04
PDGFRAP16234 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.3□□□□□ -2.04
PDGFRAP16234 RNA5SP401-201ENST00000515920 127 ntBASIC2.3□□□□□ -2.04
PDGFRAP16234 RNA5SP200-201ENST00000516360 103 ntBASIC2.3□□□□□ -2.04
PDGFRAP16234 Y_RNA.693-201ENST00000516641 110 ntBASIC2.3□□□□□ -2.04
PDGFRAP16234 RNU7-193P-201ENST00000516723 65 ntBASIC2.3□□□□□ -2.04
PDGFRAP16234 RN7SKP256-201ENST00000517201 314 ntBASIC2.3□□□□□ -2.04
PDGFRAP16234 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.3□□□□□ -2.04
PDGFRAP16234 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.3□□□□□ -2.04
PDGFRAP16234 PRELID2P1-201ENST00000552837 301 ntBASIC2.3□□□□□ -2.04
PDGFRAP16234 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.3□□□□□ -2.04
PDGFRAP16234 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.3□□□□□ -2.04
PDGFRAP16234 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.3□□□□□ -2.04
PDGFRAP16234 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.3□□□□□ -2.04
PDGFRAP16234 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
PDGFRAP16234 AC005336.3-201ENST00000623833 2679 ntBASIC2.29□□□□□ -2.04
PDGFRAP16234 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
PDGFRAP16234 RNU1-23P-201ENST00000363361 144 ntBASIC2.29□□□□□ -2.04
PDGFRAP16234 RNU6-1285P-201ENST00000363480 105 ntBASIC2.29□□□□□ -2.04
PDGFRAP16234 Y_RNA.318-201ENST00000365131 97 ntBASIC2.29□□□□□ -2.04
PDGFRAP16234 RNU6-38P-201ENST00000384085 107 ntBASIC2.29□□□□□ -2.04
PDGFRAP16234 U3.40-201ENST00000408706 208 ntBASIC2.29□□□□□ -2.04
PDGFRAP16234 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.29□□□□□ -2.04
PDGFRAP16234 USP9YP27-201ENST00000418455 438 ntBASIC2.29□□□□□ -2.04
PDGFRAP16234 USP9YP18-201ENST00000425912 695 ntBASIC2.29□□□□□ -2.04
PDGFRAP16234 DLGAP5P1-201ENST00000430307 464 ntBASIC2.29□□□□□ -2.04
PDGFRAP16234 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.29□□□□□ -2.04
PDGFRAP16234 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.29□□□□□ -2.04
PDGFRAP16234 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.29□□□□□ -2.04
PDGFRAP16234 AL353752.1-201ENST00000454946 260 ntBASIC2.29□□□□□ -2.04
PDGFRAP16234 RNU6-333P-201ENST00000459117 107 ntBASIC2.29□□□□□ -2.04
PDGFRAP16234 AC087884.1-201ENST00000469738 328 ntBASIC2.29□□□□□ -2.04
PDGFRAP16234 AC104435.1-201ENST00000483483 166 ntBASIC2.29□□□□□ -2.04
PDGFRAP16234 RPS27P21-201ENST00000486977 252 ntBASIC2.29□□□□□ -2.04
PDGFRAP16234 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.29□□□□□ -2.04
PDGFRAP16234 AC018868.1-201ENST00000491307 315 ntBASIC2.29□□□□□ -2.04
PDGFRAP16234 AC019235.1-201ENST00000503847 207 ntBASIC2.29□□□□□ -2.04
PDGFRAP16234 AC091885.1-201ENST00000506658 268 ntBASIC2.29□□□□□ -2.04
PDGFRAP16234 AC009646.1-201ENST00000510455 318 ntBASIC2.29□□□□□ -2.04
PDGFRAP16234 SNORA14.1-201ENST00000516113 141 ntBASIC2.29□□□□□ -2.04
PDGFRAP16234 RNU1-41P-201ENST00000516161 162 ntBASIC2.29□□□□□ -2.04
PDGFRAP16234 RNU1-48P-201ENST00000516400 162 ntBASIC2.29□□□□□ -2.04
PDGFRAP16234 CENPUP1-201ENST00000526649 1202 ntBASIC2.29□□□□□ -2.04
PDGFRAP16234 AC115990.1-201ENST00000526957 301 ntBASIC2.29□□□□□ -2.04
PDGFRAP16234 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.29□□□□□ -2.04
PDGFRAP16234 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.29□□□□□ -2.04
PDGFRAP16234 AL670379.2-201ENST00000604983 252 ntBASIC2.29□□□□□ -2.04
PDGFRAP16234 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
PDGFRAP16234 MIR6132-201ENST00000622083 109 ntBASIC2.29□□□□□ -2.04
PDGFRAP16234 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
PDGFRAP16234 RNU6-623P-201ENST00000363143 105 ntBASIC2.28□□□□□ -2.04
PDGFRAP16234 Y_RNA.517-201ENST00000384551 106 ntBASIC2.28□□□□□ -2.04
PDGFRAP16234 RNU6-1274P-201ENST00000384557 107 ntBASIC2.28□□□□□ -2.04
PDGFRAP16234 MIR29B2-201ENST00000385055 81 ntBASIC2.28□□□□□ -2.04
PDGFRAP16234 RNA5SP219-201ENST00000390940 113 ntBASIC2.28□□□□□ -2.04
PDGFRAP16234 SNORD37.1-201ENST00000390968 65 ntBASIC2.28□□□□□ -2.04
PDGFRAP16234 RNU6-648P-201ENST00000410190 107 ntBASIC2.28□□□□□ -2.04
PDGFRAP16234 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
PDGFRAP16234 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.28□□□□□ -2.04
PDGFRAP16234 AL031274.1-201ENST00000450334 232 ntBASIC2.28□□□□□ -2.04
PDGFRAP16234 TPTE2P5-203ENST00000458118 728 ntBASIC2.28□□□□□ -2.04
PDGFRAP16234 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.28□□□□□ -2.04
PDGFRAP16234 AC107222.1-201ENST00000510899 637 ntBASIC2.28□□□□□ -2.04
PDGFRAP16234 RNU6-189P-201ENST00000516120 101 ntBASIC2.28□□□□□ -2.04
PDGFRAP16234 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.28□□□□□ -2.04
PDGFRAP16234 SNRPGP18-201ENST00000553000 214 ntBASIC2.28□□□□□ -2.04
PDGFRAP16234 MIR1273D-201ENST00000577266 86 ntBASIC2.28□□□□□ -2.04
PDGFRAP16234 AC078899.2-201ENST00000595282 212 ntBASIC2.28□□□□□ -2.04
PDGFRAP16234 VN1R80P-201ENST00000597126 338 ntBASIC2.28□□□□□ -2.04
PDGFRAP16234 RNU6-85P-201ENST00000605989 107 ntBASIC2.28□□□□□ -2.04
PDGFRAP16234 AC103705.1-201ENST00000619013 241 ntBASIC2.28□□□□□ -2.04
PDGFRAP16234 AC090517.3-201ENST00000625170 141 ntBASIC2.28□□□□□ -2.04
PDGFRAP16234 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.28□□□□□ -2.04
PDGFRAP16234 ZNF720P1-201ENST00000562403 1939 ntBASIC2.28□□□□□ -2.04
PDGFRAP16234 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
PDGFRAP16234 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.27□□□□□ -2.05
PDGFRAP16234 RNU4-66P-201ENST00000365199 138 ntBASIC2.27□□□□□ -2.05
PDGFRAP16234 RNU6-827P-201ENST00000365553 106 ntBASIC2.27□□□□□ -2.05
PDGFRAP16234 SNORA48.3-201ENST00000391081 134 ntBASIC2.27□□□□□ -2.05
PDGFRAP16234 POLHP1-201ENST00000411806 470 ntBASIC2.27□□□□□ -2.05
PDGFRAP16234 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.27□□□□□ -2.05
PDGFRAP16234 EDDM3CP-201ENST00000415977 425 ntBASIC2.27□□□□□ -2.05
PDGFRAP16234 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.27□□□□□ -2.05
PDGFRAP16234 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.27□□□□□ -2.05
PDGFRAP16234 DPH3P2-201ENST00000422618 250 ntBASIC2.27□□□□□ -2.05
PDGFRAP16234 AL589823.1-201ENST00000429577 183 ntBASIC2.27□□□□□ -2.05
PDGFRAP16234 RNU7-138P-201ENST00000459479 64 ntBASIC2.27□□□□□ -2.05
PDGFRAP16234 AC034114.1-201ENST00000520293 285 ntBASIC2.27□□□□□ -2.05
PDGFRAP16234 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.27□□□□□ -2.05
PDGFRAP16234 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.27□□□□□ -2.05
PDGFRAP16234 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms