Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 RNU6-1141P-201ENST00000364520 107 ntBASIC1.32□□□□□ -2.2
UBCP0CG48 Y_RNA.324-201ENST00000365165 102 ntBASIC1.32□□□□□ -2.2
UBCP0CG48 MIR1304-201ENST00000408243 91 ntBASIC1.32□□□□□ -2.2
UBCP0CG48 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.32□□□□□ -2.2
UBCP0CG48 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.32□□□□□ -2.2
UBCP0CG48 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.32□□□□□ -2.2
UBCP0CG48 AC245517.4-201ENST00000448601 281 ntBASIC1.32□□□□□ -2.2
UBCP0CG48 EPS15P1-201ENST00000448836 336 ntBASIC1.32□□□□□ -2.2
UBCP0CG48 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
UBCP0CG48 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.32□□□□□ -2.2
UBCP0CG48 AC109479.2-201ENST00000517842 174 ntBASIC1.32□□□□□ -2.2
UBCP0CG48 MRPS36P3-201ENST00000519284 130 ntBASIC1.32□□□□□ -2.2
UBCP0CG48 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.32□□□□□ -2.2
UBCP0CG48 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.32□□□□□ -2.2
UBCP0CG48 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.32□□□□□ -2.2
UBCP0CG48 AC009977.1-201ENST00000586015 570 ntBASIC1.32□□□□□ -2.2
UBCP0CG48 BNIP3P16-201ENST00000589779 534 ntBASIC1.32□□□□□ -2.2
UBCP0CG48 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.32□□□□□ -2.2
UBCP0CG48 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.32□□□□□ -2.2
UBCP0CG48 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.31□□□□□ -2.2
UBCP0CG48 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
UBCP0CG48 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.31□□□□□ -2.2
UBCP0CG48 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.31□□□□□ -2.2
UBCP0CG48 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
UBCP0CG48 RNU1-62P-201ENST00000362599 164 ntBASIC1.31□□□□□ -2.2
UBCP0CG48 RNU6-414P-201ENST00000363705 104 ntBASIC1.31□□□□□ -2.2
UBCP0CG48 RNU6-296P-201ENST00000384608 107 ntBASIC1.31□□□□□ -2.2
UBCP0CG48 MIR504-201ENST00000385065 83 ntBASIC1.31□□□□□ -2.2
UBCP0CG48 MTCYBP2-201ENST00000407745 171 ntBASIC1.31□□□□□ -2.2
UBCP0CG48 MIR1267-201ENST00000408723 78 ntBASIC1.31□□□□□ -2.2
UBCP0CG48 Y_RNA.598-201ENST00000410480 95 ntBASIC1.31□□□□□ -2.2
UBCP0CG48 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.31□□□□□ -2.2
UBCP0CG48 AC104850.1-201ENST00000435940 476 ntBASIC1.31□□□□□ -2.2
UBCP0CG48 UBE2V1P8-201ENST00000437166 265 ntBASIC1.31□□□□□ -2.2
UBCP0CG48 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.31□□□□□ -2.2
UBCP0CG48 UBE2D3P4-201ENST00000441973 436 ntBASIC1.31□□□□□ -2.2
UBCP0CG48 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.31□□□□□ -2.2
UBCP0CG48 RPS29P23-201ENST00000458635 123 ntBASIC1.31□□□□□ -2.2
UBCP0CG48 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.31□□□□□ -2.2
UBCP0CG48 Vault.3-201ENST00000516676 95 ntBASIC1.31□□□□□ -2.2
UBCP0CG48 RNU6-295P-201ENST00000516901 104 ntBASIC1.31□□□□□ -2.2
UBCP0CG48 RNU2-46P-201ENST00000517038 113 ntBASIC1.31□□□□□ -2.2
UBCP0CG48 AC090572.1-201ENST00000519251 160 ntBASIC1.31□□□□□ -2.2
UBCP0CG48 AL590229.1-201ENST00000603497 542 ntBASIC1.31□□□□□ -2.2
UBCP0CG48 PRR13P7-201ENST00000605538 430 ntBASIC1.31□□□□□ -2.2
UBCP0CG48 AL133173.2-201ENST00000614270 90 ntBASIC1.31□□□□□ -2.2
UBCP0CG48 U6.114-201ENST00000636407 96 ntBASIC1.31□□□□□ -2.2
UBCP0CG48 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
UBCP0CG48 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
UBCP0CG48 RNU6-37P-201ENST00000362692 107 ntBASIC1.3□□□□□ -2.2
UBCP0CG48 RNU1-42P-201ENST00000364033 160 ntBASIC1.3□□□□□ -2.2
UBCP0CG48 RNU6-11P-201ENST00000364234 107 ntBASIC1.3□□□□□ -2.2
UBCP0CG48 RNU6-25P-201ENST00000383873 107 ntBASIC1.3□□□□□ -2.2
UBCP0CG48 RNU6-1-201ENST00000383898 107 ntBASIC1.3□□□□□ -2.2
UBCP0CG48 RNU6-48P-201ENST00000384161 107 ntBASIC1.3□□□□□ -2.2
UBCP0CG48 RNU6-36P-201ENST00000384172 107 ntBASIC1.3□□□□□ -2.2
UBCP0CG48 RNU6-4P-201ENST00000384205 107 ntBASIC1.3□□□□□ -2.2
UBCP0CG48 RNU6-5P-201ENST00000384238 107 ntBASIC1.3□□□□□ -2.2
UBCP0CG48 RNU6-43P-201ENST00000384302 107 ntBASIC1.3□□□□□ -2.2
UBCP0CG48 RNU6-3P-201ENST00000384314 107 ntBASIC1.3□□□□□ -2.2
UBCP0CG48 RNU6-16P-201ENST00000384385 107 ntBASIC1.3□□□□□ -2.2
UBCP0CG48 RNU6-15P-201ENST00000384534 107 ntBASIC1.3□□□□□ -2.2
UBCP0CG48 RNU6-2-201ENST00000384627 107 ntBASIC1.3□□□□□ -2.2
UBCP0CG48 RNU6-29P-201ENST00000384637 107 ntBASIC1.3□□□□□ -2.2
UBCP0CG48 RNU6-9-201ENST00000384776 107 ntBASIC1.3□□□□□ -2.2
UBCP0CG48 RNU6-33P-201ENST00000384793 107 ntBASIC1.3□□□□□ -2.2
UBCP0CG48 RNU6-550P-201ENST00000391057 101 ntBASIC1.3□□□□□ -2.2
UBCP0CG48 RNU6-293P-201ENST00000411259 106 ntBASIC1.3□□□□□ -2.2
UBCP0CG48 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.3□□□□□ -2.2
UBCP0CG48 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
UBCP0CG48 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.3□□□□□ -2.2
UBCP0CG48 AC244670.1-201ENST00000436879 112 ntBASIC1.3□□□□□ -2.2
UBCP0CG48 AC073614.1-201ENST00000438690 650 ntBASIC1.3□□□□□ -2.2
UBCP0CG48 AC079448.1-201ENST00000449377 373 ntBASIC1.3□□□□□ -2.2
UBCP0CG48 HMGN1P13-201ENST00000505795 138 ntBASIC1.3□□□□□ -2.2
UBCP0CG48 AC097473.1-201ENST00000508142 408 ntBASIC1.3□□□□□ -2.2
UBCP0CG48 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.3□□□□□ -2.2
UBCP0CG48 FABP5P5-201ENST00000515537 406 ntBASIC1.3□□□□□ -2.2
UBCP0CG48 RNA5SP445-201ENST00000515889 115 ntBASIC1.3□□□□□ -2.2
UBCP0CG48 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
UBCP0CG48 MTND2P32-201ENST00000521584 1038 ntBASIC1.3□□□□□ -2.2
UBCP0CG48 AP005597.4-201ENST00000526762 229 ntBASIC1.3□□□□□ -2.2
UBCP0CG48 AC023050.3-201ENST00000541142 333 ntBASIC1.3□□□□□ -2.2
UBCP0CG48 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.3□□□□□ -2.2
UBCP0CG48 TMF1P1-201ENST00000576058 373 ntBASIC1.3□□□□□ -2.2
UBCP0CG48 SNORA77B-201ENST00000578179 125 ntBASIC1.3□□□□□ -2.2
UBCP0CG48 MIR5094-201ENST00000578766 85 ntBASIC1.3□□□□□ -2.2
UBCP0CG48 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.3□□□□□ -2.2
UBCP0CG48 MIR3683-201ENST00000580847 82 ntBASIC1.3□□□□□ -2.2
UBCP0CG48 AC011494.1-201ENST00000596454 237 ntBASIC1.3□□□□□ -2.2
UBCP0CG48 AC110760.3-201ENST00000598794 467 ntBASIC1.3□□□□□ -2.2
UBCP0CG48 AP001485.1-201ENST00000604799 199 ntBASIC1.3□□□□□ -2.2
UBCP0CG48 RNU6-6P-201ENST00000606623 107 ntBASIC1.3□□□□□ -2.2
UBCP0CG48 AC004223.4-201ENST00000612426 332 ntBASIC1.3□□□□□ -2.2
UBCP0CG48 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.3□□□□□ -2.2
UBCP0CG48 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
UBCP0CG48 RNU6-1287P-201ENST00000362914 107 ntBASIC1.29□□□□□ -2.2
UBCP0CG48 RNU4-56P-201ENST00000364700 142 ntBASIC1.29□□□□□ -2.2
UBCP0CG48 Y_RNA.367-201ENST00000365544 101 ntBASIC1.29□□□□□ -2.2
UBCP0CG48 RNU6-1060P-201ENST00000384664 107 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms